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Pay0010067 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0010067
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionDead box ATP-dependent RNA helicase, putative
Genome locationContig00140_ERROPOS1590918:76103..78096
RNA-Seq ExpressionPay0010067
SyntenyPay0010067
Gene Ontology termsGO:0006865 - amino acid transport (biological process)
GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015293 - symporter activity (molecular function)
GO:0020037 - heme binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0005506 - iron ion binding (molecular function)
GO:0004497 - monooxygenase activity (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
InterPro domainsIPR036431 - ARID DNA-binding domain superfamily
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR001650 - Helicase, C-terminal
IPR001606 - ARID DNA-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025401.1 protein transport protein SEC31-like protein B [Cucumis melo var. makuwa]7.8e-1790.57Show/hide
Query:  EKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR
        ++AAHRL ILFGLAGFE TELHGNLTQVQLLDALE+FRKQQVYFLISTDVAAR
Subjt:  EKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR

KAA0054911.1 DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis melo var. makuwa]1.9e-1590.57Show/hide
Query:  EKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR
        ++AAHRLKILFGLAGFE TEL GNLTQVQLLDALELF KQQVYFLISTDVAAR
Subjt:  EKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR

KAA0064209.1 amino acid permease 3-like [Cucumis melo var. makuwa]9.2e-1896.15Show/hide
Query:  KAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR
        +AAHRLKILFGLAGFEGTELHGNLTQVQLLDALELF+KQQVYFLISTDVAAR
Subjt:  KAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR

TYK02819.1 amino acid permease 3-like [Cucumis melo var. makuwa]2.1e-1796.15Show/hide
Query:  KAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR
        +AAHRLKILFGLAGFEGTELHGNLTQVQLLDALELF KQQVYFLISTDVAAR
Subjt:  KAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR

TYK09772.1 DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis melo var. makuwa]3.0e-1688.68Show/hide
Query:  EKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR
        ++AAHRL ILFGLAGFE +ELHGNLTQVQLLDALE+FRKQQVYFLISTDVAAR
Subjt:  EKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR

TrEMBL top hitse value%identityAlignment
A0A5A7SMD2 Protein transport protein SEC31-like protein B3.8e-1790.57Show/hide
Query:  EKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR
        ++AAHRL ILFGLAGFE TELHGNLTQVQLLDALE+FRKQQVYFLISTDVAAR
Subjt:  EKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR

A0A5A7UMW9 DEAD-box ATP-dependent RNA helicase 28 isoform X29.3e-1690.57Show/hide
Query:  EKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR
        ++AAHRLKILFGLAGFE TEL GNLTQVQLLDALELF KQQVYFLISTDVAAR
Subjt:  EKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR

A0A5A7VFA3 Amino acid permease 3-like4.5e-1896.15Show/hide
Query:  KAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR
        +AAHRLKILFGLAGFEGTELHGNLTQVQLLDALELF+KQQVYFLISTDVAAR
Subjt:  KAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR

A0A5D3BXJ5 Amino acid permease 3-like9.9e-1896.15Show/hide
Query:  KAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR
        +AAHRLKILFGLAGFEGTELHGNLTQVQLLDALELF KQQVYFLISTDVAAR
Subjt:  KAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR

A0A5D3CEQ8 DEAD-box ATP-dependent RNA helicase 28 isoform X21.4e-1688.68Show/hide
Query:  EKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR
        ++AAHRL ILFGLAGFE +ELHGNLTQVQLLDALE+FRKQQVYFLISTDVAAR
Subjt:  EKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR

SwissProt top hitse value%identityAlignment
A1A4H6 Probable ATP-dependent RNA helicase DDX276.2e-0948.48Show/hide
Query:  EKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR------VRTLFDF
        +K AHR+ IL GL G +  ELHGNL+Q Q L+AL  F+ +Q+  L++TDVAAR      V+T+ +F
Subjt:  EKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR------VRTLFDF

Q0INC5 DEAD-box ATP-dependent RNA helicase 285.8e-1561.97Show/hide
Query:  GIEKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR------VRTLFDFVSC
        G + +AHRLKI+FGL+G +  ELHGNLTQ Q L+ALELF+KQ+V FLI+TDVAAR      VRT+ +F SC
Subjt:  GIEKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR------VRTLFDFVSC

Q9MAT6 High mobility group B protein 151.9e-1380.95Show/hide
Query:  MTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK
        MT+LE+LHSL+GTKFM+PIIGG++LDLH+LFVEVTSRGGI K
Subjt:  MTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK

Q9SGS2 High mobility group B protein 99.6e-1074.36Show/hide
Query:  LEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK
        L + HS+M TKFMIP+IGGKELDLH L+VEVT RGG EK
Subjt:  LEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK

Q9ZRZ8 DEAD-box ATP-dependent RNA helicase 286.9e-1676.36Show/hide
Query:  GIEKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR
        G ++AAHRLKILFGLAG +  ELHGNLTQ Q LD+LELFRKQ+V FLI+TDVAAR
Subjt:  GIEKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR

Arabidopsis top hitse value%identityAlignment
AT1G04880.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain1.3e-1480.95Show/hide
Query:  MTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK
        MT+LE+LHSL+GTKFM+PIIGG++LDLH+LFVEVTSRGGI K
Subjt:  MTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK

AT1G55650.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain3.2e-0866.67Show/hide
Query:  LEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK
        L   H     KF IPI+GGK LDLHRLF EVTSRGG+EK
Subjt:  LEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK

AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain6.8e-1174.36Show/hide
Query:  LEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK
        L + HS+M TKFMIP+IGGKELDLH L+VEVT RGG EK
Subjt:  LEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK

AT3G13350.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain1.0e-0637.21Show/hide
Query:  EKLHSLMG---TKFMIPIIGGKELDLHRLFVEVTSRGGIEKAA--HRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFL
        EKL + +G       +P +GG  LDLHRLF+EVTSRGGIE+     + K + G   F  T    +   ++      LF+ + VY+L
Subjt:  EKLHSLMG---TKFMIPIIGGKELDLHRLFVEVTSRGGIEKAA--HRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFL

AT4G16630.1 DEA(D/H)-box RNA helicase family protein4.9e-1776.36Show/hide
Query:  GIEKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR
        G ++AAHRLKILFGLAG +  ELHGNLTQ Q LD+LELFRKQ+V FLI+TDVAAR
Subjt:  GIEKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGCCTTGGAAAAGCTCCACTCCCTCATGGGAACTAAGTTCATGATCCCCATTATTGGTGGGAAAGAACTAGACCTGCATCGGCTTTTTGTGGAGGTTACTTCTCG
TGGTGGGATTGAGAAGGCTGCTCATAGGCTAAAGATTTTATTTGGATTAGCTGGTTTTGAAGGTACTGAACTTCATGGAAATCTTACCCAAGTTCAACTTCTTGATGCCT
TGGAACTTTTCAGAAAACAACAAGTTTATTTTCTTATTTCTACAGATGTGGCTGCTCGGGTGCGAACTCTCTTTGATTTTGTTTCTTGTCTTGGACTGAATATTGAACTT
ATGTATTGGACTATAGAGTTGAACCTTTTGCTTTGCTTAGGATTGGATGGAAAAAACTATCGTGCTTGCTTTGGCCACTGGACAAAAGAGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAGCCTTGGAAAAGCTCCACTCCCTCATGGGAACTAAGTTCATGATCCCCATTATTGGTGGGAAAGAACTAGACCTGCATCGGCTTTTTGTGGAGGTTACTTCTCG
TGGTGGGATTGAGAAGGCTGCTCATAGGCTAAAGATTTTATTTGGATTAGCTGGTTTTGAAGGTACTGAACTTCATGGAAATCTTACCCAAGTTCAACTTCTTGATGCCT
TGGAACTTTTCAGAAAACAACAAGTTTATTTTCTTATTTCTACAGATGTGGCTGCTCGGGTGCGAACTCTCTTTGATTTTGTTTCTTGTCTTGGACTGAATATTGAACTT
ATGTATTGGACTATAGAGTTGAACCTTTTGCTTTGCTTAGGATTGGATGGAAAAAACTATCGTGCTTGCTTTGGCCACTGGACAAAAGAGATTTAG
Protein sequenceShow/hide protein sequence
MTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKAAHRLKILFGLAGFEGTELHGNLTQVQLLDALELFRKQQVYFLISTDVAARVRTLFDFVSCLGLNIEL
MYWTIELNLLLCLGLDGKNYRACFGHWTKEI