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Pay0010086 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0010086
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPHD finger protein ALFIN-LIKE 3-like
Genome locationchr05:18792366..18795675
RNA-Seq ExpressionPay0010086
SyntenyPay0010086
Gene Ontology termsGO:0006270 - DNA replication initiation (biological process)
GO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0005634 - nucleus (cellular component)
GO:0042555 - MCM complex (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003678 - DNA helicase activity (molecular function)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001208 - MCM domain
IPR021998 - Alfin, N-terminal
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR045104 - Alfin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051331.1 transducin beta-like protein 2 [Cucumis melo var. makuwa]6.1e-5284.25Show/hide
Query:  MDDSGVAKSQLLKHIINVAPRGIYTTGKGSCSKNIDCCPADKDQNKKHHPLDLNTLKGHRDSSSGLCFSSDGSNLATDVEGFYQQCDPGTCLERNLCLYG
        M DSGVAKSQLLKHIINVAPRGIYTTGKGSCSKNIDCCPADKDQNKKHHPLDLNTLKGHRDSS+GLCFSSDGSNLATDVEGFYQQCDP            
Subjt:  MDDSGVAKSQLLKHIINVAPRGIYTTGKGSCSKNIDCCPADKDQNKKHHPLDLNTLKGHRDSSSGLCFSSDGSNLATDVEGFYQQCDPGTCLERNLCLYG

Query:  FPNEVWEVILTYAEEVPPKLLDLALGI
            VWEV LTYAEEVPPKLLDLAL I
Subjt:  FPNEVWEVILTYAEEVPPKLLDLALGI

KAG6575454.1 Phospholipid:diacylglycerol acyltransferase 1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1972.22Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L  DVE FYQQCDP    + NLCLYGFPNEVWEV L  AEEVPP+L + ALGI+FA+DGMQERDWLAL+ VH
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH

TYK23884.1 putative tRNA pseudouridine synthase Pus10 [Cucumis melo var. makuwa]2.4e-7296.35Show/hide
Query:  RIRGDLHICLMDDSGVAKSQLLKHIINVAPRGIYTTGKGSCSKNIDCCPADKDQNKKHHPLDLNTLKGHRDSSSGLCFSSDGSNLATDVEGFYQQCDPGT
        +IRGDLHICLM DSGVAKSQLLKHIINVAPRGIYTTGKGSCSKNIDCCPADKDQNKKHHPLDLNTLKGHRDSS+GLCFSSDGSNLATDVEGFYQQCDPGT
Subjt:  RIRGDLHICLMDDSGVAKSQLLKHIINVAPRGIYTTGKGSCSKNIDCCPADKDQNKKHHPLDLNTLKGHRDSSSGLCFSSDGSNLATDVEGFYQQCDPGT

Query:  CLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGI
        CLERNLCLYGFPNEVWEV LTYAEEVPPKLLDLAL I
Subjt:  CLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGI

XP_022953587.1 PHD finger protein ALFIN-LIKE 3-like [Cucurbita moschata]1.1e-1972.22Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L  DVE FYQQCDP    + NLCLYGFPNEVWEV L  AEEVPP+L + ALGI+FA+DGMQERDWLAL+ VH
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH

XP_023548871.1 PHD finger protein ALFIN-LIKE 3-like [Cucurbita pepo subsp. pepo]1.1e-1972.22Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L  DVE FYQQCDP    + NLCLYGFPNEVWEV L  AEEVPP+L + ALGI+FA+DGMQERDWLAL+ VH
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH

TrEMBL top hitse value%identityAlignment
A0A5A7UCQ4 Transducin beta-like protein 23.0e-5284.25Show/hide
Query:  MDDSGVAKSQLLKHIINVAPRGIYTTGKGSCSKNIDCCPADKDQNKKHHPLDLNTLKGHRDSSSGLCFSSDGSNLATDVEGFYQQCDPGTCLERNLCLYG
        M DSGVAKSQLLKHIINVAPRGIYTTGKGSCSKNIDCCPADKDQNKKHHPLDLNTLKGHRDSS+GLCFSSDGSNLATDVEGFYQQCDP            
Subjt:  MDDSGVAKSQLLKHIINVAPRGIYTTGKGSCSKNIDCCPADKDQNKKHHPLDLNTLKGHRDSSSGLCFSSDGSNLATDVEGFYQQCDPGTCLERNLCLYG

Query:  FPNEVWEVILTYAEEVPPKLLDLALGI
            VWEV LTYAEEVPPKLLDLAL I
Subjt:  FPNEVWEVILTYAEEVPPKLLDLALGI

A0A5D3BXQ0 PHD finger protein ALFIN-LIKE 3-like isoform X26.7e-2072.22Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L  DVE FYQQCDP    + NLCLYGFPNEVWEV L  AEEVPP+L + ALGI+FA+DGMQERDWLAL+ VH
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH

A0A5D3DJR6 DNA replication licensing factor MCM71.2e-7296.35Show/hide
Query:  RIRGDLHICLMDDSGVAKSQLLKHIINVAPRGIYTTGKGSCSKNIDCCPADKDQNKKHHPLDLNTLKGHRDSSSGLCFSSDGSNLATDVEGFYQQCDPGT
        +IRGDLHICLM DSGVAKSQLLKHIINVAPRGIYTTGKGSCSKNIDCCPADKDQNKKHHPLDLNTLKGHRDSS+GLCFSSDGSNLATDVEGFYQQCDPGT
Subjt:  RIRGDLHICLMDDSGVAKSQLLKHIINVAPRGIYTTGKGSCSKNIDCCPADKDQNKKHHPLDLNTLKGHRDSSSGLCFSSDGSNLATDVEGFYQQCDPGT

Query:  CLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGI
        CLERNLCLYGFPNEVWEV LTYAEEVPPKLLDLAL I
Subjt:  CLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGI

A0A6J1GNM8 PHD finger protein ALFIN-LIKE 3-like5.1e-2072.22Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L  DVE FYQQCDP    + NLCLYGFPNEVWEV L  AEEVPP+L + ALGI+FA+DGMQERDWLAL+ VH
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH

A0A6J1JPM4 PHD finger protein ALFIN-LIKE 3-like5.1e-2072.22Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L  DVE FYQQCDP    + NLCLYGFPNEVWEV L  AEEVPP+L + ALGI+FA+DGMQERDWLAL+ VH
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH

SwissProt top hitse value%identityAlignment
A2Y4R8 PHD finger protein ALFIN-LIKE 51.7e-2065.28Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L TDVE FYQ CDP    + NLCLYG+PNE WEV L  AEEVPP++ + ALGI+FA+DGM E+DWLAL+ VH
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH

B8BJV8 PHD finger protein ALFIN-LIKE 81.3e-2066.67Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L TDVE FYQQCDP    + NLCLYG PNE WEV L  AEEVPP+L + ALGI+FA+DGM E+DWL+L+ VH
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH

Q2R837 PHD finger protein ALFIN-LIKE 81.3e-2066.67Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L TDVE FYQQCDP    + NLCLYG PNE WEV L  AEEVPP+L + ALGI+FA+DGM E+DWL+L+ VH
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH

Q5XEM9 PHD finger protein ALFIN-LIKE 56.9e-2269.44Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L TDVE F+QQCDP    ++NLCLYGFPNEVWEV L  AEEVPP+L + ALGI+FA+DGMQER+WL+L+ VH
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH

Q60DW3 PHD finger protein ALFIN-LIKE 51.7e-2065.28Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L TDVE FYQ CDP    + NLCLYG+PNE WEV L  AEEVPP++ + ALGI+FA+DGM E+DWLAL+ VH
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH

Arabidopsis top hitse value%identityAlignment
AT1G14510.1 alfin-like 77.8e-2162.5Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L+TDV+ FY QCDP    + NLCLYG PNE WEV L   EEVPP+L + ALGI+FA+DGMQE+DW++L+ VH
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH

AT2G02470.1 alfin-like 64.3e-1959.72Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L  D+  FYQ CDP    + NLCLYG PNE WEV L   EEVPP+L + ALGI+FA+DGMQE+DW++L+ VH
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH

AT3G11200.1 alfin-like 26.6e-2062.5Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L  DV+ FY QCDP    + NLCLYG PNE WEV L  AEEVPP+L + ALGI+FA+DGMQ +DWL+L+ VH
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH

AT3G42790.1 alfin-like 33.0e-2061.11Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L TDV+ FYQQCDP    + NLCLYG PNE WEV L  AEEVPP+L + ALGI+FA+DG+ E++WL+L+ +H
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH

AT5G20510.1 alfin-like 54.9e-2369.44Show/hide
Query:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH
        L TDVE F+QQCDP    ++NLCLYGFPNEVWEV L  AEEVPP+L + ALGI+FA+DGMQER+WL+L+ VH
Subjt:  LATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGAAAAGGATTCTGATATTGTCCAAATTTCCTTATGCCTGATCATTCTTCTTTCAGTGAAGTTTACATTAGAGCATCTTCAAAGGATTAGAGGAGACTTGCATAT
TTGTTTGATGGATGATTCTGGAGTTGCAAAGAGTCAACTTCTTAAACACATCATCAATGTTGCTCCAAGGGGAATCTACACAACTGGTAAAGGGAGTTGTTCGAAAAATA
TTGATTGTTGTCCAGCAGACAAGGATCAAAACAAGAAACATCACCCGTTAGATTTGAATACACTGAAAGGTCACAGAGATTCTTCCTCTGGATTATGCTTCTCCTCAGAT
GGAAGTAATCTGGCGACTGATGTTGAAGGGTTTTATCAACAATGTGATCCTGGTACATGCTTAGAAAGAAATCTATGCTTGTATGGGTTTCCAAATGAAGTATGGGAAGT
TATTCTAACTTATGCTGAAGAAGTACCTCCCAAACTTCTAGACCTAGCATTGGGTATTAGTTTTGCAAAAGATGGCATGCAAGAAAGGGATTGGTTGGCTTTGATTACTG
TACATATAGTGATGCTTGGTTGGTCTTTGTTGCTGTACATATAG
mRNA sequenceShow/hide mRNA sequence
ATAAGAGAAGCATTTATCGAGGTTCAGGTAGACCTTTCTTGGTTGAGATACAGAACACATGTCTTTTCCCATTTGAGGTGATAATAAATGAAATACAATCAAAGAGCTCA
GAGAATAAATTTGTAAGCTGTTCATATTGTACTGCTTCTTCCATAGATTAAAATTAGTTAAATTTCATATGAATTACATTATTATTTCAGGTTGGCGTAAGAAATCTTAA
AGTTGAAGGCAGCGAGGGTTGGGCCCTGGTTCAAGAAGGAGAAGCAGTGAAGCAAGTTTTCCCTTTGATTTGCTTTATGCTTGAAAAGGATTCTGATATTGTCCAAATTT
CCTTATGCCTGATCATTCTTCTTTCAGTGAAGTTTACATTAGAGCATCTTCAAAGGATTAGAGGAGACTTGCATATTTGTTTGATGGATGATTCTGGAGTTGCAAAGAGT
CAACTTCTTAAACACATCATCAATGTTGCTCCAAGGGGAATCTACACAACTGGTAAAGGGAGTTGTTCGAAAAATATTGATTGTTGTCCAGCAGACAAGGATCAAAACAA
GAAACATCACCCGTTAGATTTGAATACACTGAAAGGTCACAGAGATTCTTCCTCTGGATTATGCTTCTCCTCAGATGGAAGTAATCTGGCGACTGATGTTGAAGGGTTTT
ATCAACAATGTGATCCTGGTACATGCTTAGAAAGAAATCTATGCTTGTATGGGTTTCCAAATGAAGTATGGGAAGTTATTCTAACTTATGCTGAAGAAGTACCTCCCAAA
CTTCTAGACCTAGCATTGGGTATTAGTTTTGCAAAAGATGGCATGCAAGAAAGGGATTGGTTGGCTTTGATTACTGTACATATAGTGATGCTTGGTTGGTCTTTGTTGCT
GTACATATAG
Protein sequenceShow/hide protein sequence
MLEKDSDIVQISLCLIILLSVKFTLEHLQRIRGDLHICLMDDSGVAKSQLLKHIINVAPRGIYTTGKGSCSKNIDCCPADKDQNKKHHPLDLNTLKGHRDSSSGLCFSSD
GSNLATDVEGFYQQCDPGTCLERNLCLYGFPNEVWEVILTYAEEVPPKLLDLALGISFAKDGMQERDWLALITVHIVMLGWSLLLYI