CuGenDBv2

Gene ID	Pay0010223
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Genome location	chr08:16918390..16920666
RNA-Seq Expression	Pay0010223
Synteny	Pay0010223
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0004519 - endonuclease activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR016197 - Chromo-like domain superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AAO45752.1 pol protein [Cucumis melo subsp. melo]

0.0e+00

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Query:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
        MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
Subjt:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE

Query:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
        DSFQTLKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF

Query:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------
        TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV VGAVTMQLAQLTVQPTLRQ+IIDAQ+        
Subjt:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST
                                                HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST
Subjt:  ----------------------------------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST

Query:  AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHT
        AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHT
Subjt:  AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHT

Query:  AQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEI
        AQSRQKSYADVRRKDLEFEVGDKVFLKVAPM+GVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDYEPLEI
Subjt:  AQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEI

Query:  DENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELF
        DENLSYVEQPVEVLAR VKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELF
Subjt:  DENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELF

KAA0032207.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

81.66

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Query:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
        MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
Subjt:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE

Query:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
        DSFQ LKQKL TAPVLTVPDGSGSF+IYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF

Query:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQTH-------
        TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQ+IIDAQ++       
Subjt:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQTH-------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS
               FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQT MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS
Subjt:  -------FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS

Query:  HLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV
        HLHLMEFAYNNSYQA IGMAPFEALYGKCCRSPVCW EVGEQRLMGPELVQSTNEAIQKIRS MHTAQS QKSYADVRRKDLEFEVGDKVFLKVAPMRGV
Subjt:  HLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV

Query:  LRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWR
        LRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNK+IPLVKVLWR
Subjt:  LRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWR

Query:  NHRVEEATWEREDDMRSRYPELFEK
        NHRVEEATWEREDD RSRYP+LFE+
Subjt:  NHRVEEATWEREDDMRSRYPELFEK

KAA0040689.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

80.84

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Query:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
        MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
Subjt:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE

Query:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
        DSFQ LKQKLVTAPVL VPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF

Query:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------
        TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQ+IIDAQ+        
Subjt:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRA
                         HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT+GQTERLNQVLEDMLRA
Subjt:  -----------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRA

Query:  CALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDK
        CALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCW EVGEQRLMGPELV+STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDK
Subjt:  CALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDK

Query:  VFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRN
        VFLKVAPMRGVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRN
Subjt:  VFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRN

Query:  KQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEK
        K+IP+VKVLWRNHRV EATWEREDDMRSRYPELFE+
Subjt:  KQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEK

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

78.76

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Query:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
        MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
Subjt:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE

Query:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
        DSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF

Query:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------
        TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQ+IIDAQ+        
Subjt:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA
                                               HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA
Subjt:  ---------------------------------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA

Query:  FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTA
        FHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTA
Subjt:  FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTA

Query:  QSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEID
        QSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDYEPLEID
Subjt:  QSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEID

Query:  ENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEK
        ENLSYVEQPVEVLAREVKTLRNK+IPLVKVLWRNHRVEEATWEREDDMRSRYPELFE+
Subjt:  ENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEK

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

78.23

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Query:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
        MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACE
Subjt:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE

Query:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
        DSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF

Query:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------
        TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQ+IIDAQ+        
Subjt:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA
                                               HFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA
Subjt:  ---------------------------------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA

Query:  FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTA
        FHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP+CW EVGEQRLMGPELVQSTNEAIQKIRSRMHTA
Subjt:  FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTA

Query:  QSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEID
        QSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDY+PLEID
Subjt:  QSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEID

Query:  ENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEK
        ENLSY+EQPVEVLAREVKTLRNK+IPLVKVLWRNHR+EEATWEREDDMRSRYPELFE+
Subjt:  ENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SS38 Pol protein

0.0e+00

81.66

Show/hide

Query:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
        MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
Subjt:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE

Query:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
        DSFQ LKQKL TAPVLTVPDGSGSF+IYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF

Query:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQTH-------
        TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQ+IIDAQ++       
Subjt:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQTH-------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS
               FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQT MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS
Subjt:  -------FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS

Query:  HLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV
        HLHLMEFAYNNSYQA IGMAPFEALYGKCCRSPVCW EVGEQRLMGPELVQSTNEAIQKIRS MHTAQS QKSYADVRRKDLEFEVGDKVFLKVAPMRGV
Subjt:  HLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV

Query:  LRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWR
        LRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNK+IPLVKVLWR
Subjt:  LRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWR

Query:  NHRVEEATWEREDDMRSRYPELFEK
        NHRVEEATWEREDD RSRYP+LFE+
Subjt:  NHRVEEATWEREDDMRSRYPELFEK

A0A5A7THE6 Reverse transcriptase

0.0e+00

80.84

Show/hide

Query:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
        MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDP KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
Subjt:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE

Query:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
        DSFQ LKQKLVTAPVL VPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF

Query:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------
        TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQ+IIDAQ+        
Subjt:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRA
                         HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT+GQTERLNQVLEDMLRA
Subjt:  -----------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRA

Query:  CALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDK
        CALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCW EVGEQRLMGPELV+STNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDK
Subjt:  CALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDK

Query:  VFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRN
        VFLKVAPMRGVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRN
Subjt:  VFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRN

Query:  KQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEK
        K+IP+VKVLWRNHRV EATWEREDDMRSRYPELFE+
Subjt:  KQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEK

A0A5A7UAA8 Reverse transcriptase

0.0e+00

78.76

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Query:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
        MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
Subjt:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE

Query:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
        DSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF

Query:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------
        TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQ+IIDAQ+        
Subjt:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA
                                               HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA
Subjt:  ---------------------------------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA

Query:  FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTA
        FHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHTA
Subjt:  FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTA

Query:  QSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEID
        QSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDYEPLEID
Subjt:  QSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEID

Query:  ENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEK
        ENLSYVEQPVEVLAREVKTLRNK+IPLVKVLWRNHRVEEATWEREDDMRSRYPELFE+
Subjt:  ENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEK

A0A5A7UP94 Pol protein

0.0e+00

78.23

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Query:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
        MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACE
Subjt:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE

Query:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
        DSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF

Query:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------
        TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQ+IIDAQ+        
Subjt:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA
                                               HFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA
Subjt:  ---------------------------------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTA

Query:  FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTA
        FHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY KCCRSP+CW EVGEQRLMGPELVQSTNEAIQKIRSRMHTA
Subjt:  FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTA

Query:  QSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEID
        QSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDY+PLEID
Subjt:  QSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEID

Query:  ENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEK
        ENLSY+EQPVEVLAREVKTLRNK+IPLVKVLWRNHR+EEATWEREDDMRSRYPELFE+
Subjt:  ENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEK

Q84KB0 Pol protein

0.0e+00

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Query:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
        MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE
Subjt:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACE

Query:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
        DSFQTLKQKLVTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt:  DSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFF

Query:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------
        TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV VGAVTMQLAQLTVQPTLRQ+IIDAQ+        
Subjt:  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQT--------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST
                                                HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST
Subjt:  ----------------------------------------HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST

Query:  AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHT
        AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCW EVGEQRLMGPELVQSTNEAIQKIRSRMHT
Subjt:  AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHT

Query:  AQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEI
        AQSRQKSYADVRRKDLEFEVGDKVFLKVAPM+GVLRFE+RGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYV DPSHVVDYEPLEI
Subjt:  AQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEI

Query:  DENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELF
        DENLSYVEQPVEVLAR VKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELF
Subjt:  DENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELF

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

2.6e-59

26.95

Show/hide

Query:  VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACED
        VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     
Subjt:  VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACED

Query:  SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHK
        + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH+
Subjt:  SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHK

Query:  SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV---------------------------------------------------
        +L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR V                                                   
Subjt:  SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV---------------------------------------------------

Query:  --------------SHSAALITRQAPLHRDL------ERAEIAVSVGAVTMQLAQLTVQPTLRQKIID------------AQTH----------------
                      S    L+     L R +      E   I   +  +T  + +      +R++I +            ++ H                
Subjt:  --------------SHSAALITRQAPLHRDL------ERAEIAVSVGAVTMQLAQLTVQPTLRQKIID------------AQTH----------------

Query:  --------------------------------FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQ
                                         VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQ
Subjt:  --------------------------------FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQ

Query:  TERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSY
        TER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+      ++     E  Q T +  Q ++  ++T   + K Y
Subjt:  TERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSY

Query:  ADVRRKDL-EFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
         D++ +++ EF+ GD V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  ADVRRKDL-EFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT35 Transposon Tf2-2 polyprotein

2.6e-59

26.95

Show/hide

Query:  VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACED
        VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     
Subjt:  VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACED

Query:  SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHK
        + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH+
Subjt:  SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHK

Query:  SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV---------------------------------------------------
        +L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR V                                                   
Subjt:  SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV---------------------------------------------------

Query:  --------------SHSAALITRQAPLHRDL------ERAEIAVSVGAVTMQLAQLTVQPTLRQKIID------------AQTH----------------
                      S    L+     L R +      E   I   +  +T  + +      +R++I +            ++ H                
Subjt:  --------------SHSAALITRQAPLHRDL------ERAEIAVSVGAVTMQLAQLTVQPTLRQKIID------------AQTH----------------

Query:  --------------------------------FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQ
                                         VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQ
Subjt:  --------------------------------FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQ

Query:  TERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSY
        TER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+      ++     E  Q T +  Q ++  ++T   + K Y
Subjt:  TERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSY

Query:  ADVRRKDL-EFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
         D++ +++ EF+ GD V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  ADVRRKDL-EFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT36 Transposon Tf2-3 polyprotein

2.6e-59

26.95

Show/hide

Query:  VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACED
        VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     
Subjt:  VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACED

Query:  SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHK
        + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH+
Subjt:  SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHK

Query:  SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV---------------------------------------------------
        +L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR V                                                   
Subjt:  SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV---------------------------------------------------

Query:  --------------SHSAALITRQAPLHRDL------ERAEIAVSVGAVTMQLAQLTVQPTLRQKIID------------AQTH----------------
                      S    L+     L R +      E   I   +  +T  + +      +R++I +            ++ H                
Subjt:  --------------SHSAALITRQAPLHRDL------ERAEIAVSVGAVTMQLAQLTVQPTLRQKIID------------AQTH----------------

Query:  --------------------------------FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQ
                                         VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQ
Subjt:  --------------------------------FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQ

Query:  TERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSY
        TER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+      ++     E  Q T +  Q ++  ++T   + K Y
Subjt:  TERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSY

Query:  ADVRRKDL-EFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
         D++ +++ EF+ GD V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  ADVRRKDL-EFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT41 Transposon Tf2-12 polyprotein

2.6e-59

26.95

Show/hide

Query:  VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACED
        VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     
Subjt:  VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACED

Query:  SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHK
        + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH+
Subjt:  SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHK

Query:  SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV---------------------------------------------------
        +L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR V                                                   
Subjt:  SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV---------------------------------------------------

Query:  --------------SHSAALITRQAPLHRDL------ERAEIAVSVGAVTMQLAQLTVQPTLRQKIID------------AQTH----------------
                      S    L+     L R +      E   I   +  +T  + +      +R++I +            ++ H                
Subjt:  --------------SHSAALITRQAPLHRDL------ERAEIAVSVGAVTMQLAQLTVQPTLRQKIID------------AQTH----------------

Query:  --------------------------------FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQ
                                         VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQ
Subjt:  --------------------------------FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQ

Query:  TERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSY
        TER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+      ++     E  Q T +  Q ++  ++T   + K Y
Subjt:  TERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSY

Query:  ADVRRKDL-EFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
         D++ +++ EF+ GD V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  ADVRRKDL-EFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

Q9UR07 Transposon Tf2-11 polyprotein

2.6e-59

26.95

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Query:  VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACED
        VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     
Subjt:  VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACED

Query:  SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHK
        + + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH+
Subjt:  SFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHK

Query:  SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV---------------------------------------------------
        +L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR V                                                   
Subjt:  SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV---------------------------------------------------

Query:  --------------SHSAALITRQAPLHRDL------ERAEIAVSVGAVTMQLAQLTVQPTLRQKIID------------AQTH----------------
                      S    L+     L R +      E   I   +  +T  + +      +R++I +            ++ H                
Subjt:  --------------SHSAALITRQAPLHRDL------ERAEIAVSVGAVTMQLAQLTVQPTLRQKIID------------AQTH----------------

Query:  --------------------------------FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQ
                                         VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQ
Subjt:  --------------------------------FVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQ

Query:  TERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSY
        TER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      SP+      ++     E  Q T +  Q ++  ++T   + K Y
Subjt:  TERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWEEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSY

Query:  ADVRRKDL-EFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
         D++ +++ EF+ GD V +K     G L   K  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  ADVRRKDL-EFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

3.5e-27

45.31

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Query:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKA
        MVLQ    ++ YA   KC F   Q+++LG  H++S +GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++ 
Subjt:  MVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKA

Query:  CEDSFQTLKQKLVTAPVLTVPDGSGSFV
           +F+ LK  + T PVL +PD    FV
Subjt:  CEDSFQTLKQKLVTAPVLTVPDGSGSFV

Sequences

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CDS sequence

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ATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGATGGAGT
CTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGG
AGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTA
GTTACCGCGCCGGTTCTTACGGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGT
CGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATACG
GTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGAT
TGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGA
TCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGTGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAAGATCATTGATGCTCAGACGCACT
TTGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCC
CGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGATTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCA
GGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTG
GCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGAAGAGGTAGGTGAGCAAAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAAC
GAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAAGTGTT
CTTAAAGGTAGCACCTATGAGAGGTGTCTTGCGTTTTGAAAAGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTT
ATCGCTTGGCGTTACCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGTCAGATCCATCCCACGTAGTGGATTACGAGCCACTA
GAGATTGATGAAAACTTGAGCTATGTTGAACAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAGACGTTGAGAAATAAACAAATTCCCCTAGTTAAAGTCTTATGGCGGAA
TCACCGGGTAGAAGAGGCTACATGGGAGCGTGAAGACGACATGAGATCCCGTTATCCCGAACTGTTCGAGAAGTAA

mRNA sequence

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Protein sequence

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MVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKDGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKL
VTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYD
CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQKIIDAQTHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDA
RFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWEEVGEQRLMGPELVQSTN
EAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPL
EIDENLSYVEQPVEVLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEK

Pay0010223 (gene) of Melon (Payzawat) v1 genome