CuGenDBv2

Gene ID	Pay0010311
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase
Genome location	chr08:15163190..15175977
RNA-Seq Expression	Pay0010311
Synteny	Pay0010311
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001878 - Zinc finger, CCHC-type IPR005162 - Retrotransposon gag domain IPR021109 - Aspartic peptidase domain superfamily IPR036875 - Zinc finger, CCHC-type superfamily IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

73.35

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Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGE STL  RGGAGNEQFART +EIGR DRAEPSDPEKAYGIERLKKL ATVFEGSTDPADAENWLNMLEKC DVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM

Query:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        N PEERKVRLATFLL KEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTY EAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------
        ERGLRFEIRTP+TAIAKWTNFSQLVET LRVEQSITEEKSAVEL RGTS ASGFRGR+QRRFTPGINISSRQDFKNRSGGQASRNVS             
Subjt:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------

Query:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP
                     QESIASTVRR PCT CGRNHRGQCLVG GVCYQCGQ GHFKKDCPQLNMTVQRDQGVGSQT+EQSRVSVVPTEGT GARQKGVVGRP
Subjt:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP

Query:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT
        RQQGKVYAMTQQE ED+P VITGT  ICNVPAD+LFDPGATHSFV SIFLTKLNRMLEPLSEGLAIY     TP G+ +L  E ++ C++ + G  + V 
Subjt:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT

Query:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP
        LL L++   DVILGMD+L A +AS+DC RKEV F  P      F+G     SRS++   + +  L                        P+V+++ DVFP
Subjt:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP

Query:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL
        ++LSGLPP REI+F +EL  GT PIS+APYRMA +ELKELK+QLQEL+DKG+IR SVSPWGAPVLFVK+KDG++ LC DYR+LNKVT++N+YPLPRI+DL
Subjt:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL

Query:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT
        FDQL GA +FSKIDLRSGYHQL++++ D+ KT+FR+RYGHYEF VM FGLTNAP VFMDLMNR+F  +LD FVIVFIDDIL+YS     HEEHLR+VLQT
Subjt:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT

Query:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN
        LR+ +LYAKFSKCEFWL QV          GVSVDP K+EA+ +W RP + +EVRSFLGLAGYYRRF+E+FSR+A PLT LTRK   F WS  CE SFQ 
Subjt:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL
        LK++LVTAP+L +P     +VIY DAS+ GLGCVLMQ G V+AYASRQLK H+ NY THDLELAAVVL
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

73.35

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Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGE STL  RGGAGNEQFART +EIGR DRAEPSDPEKAYGIERLKKL ATVFEGSTDPADAENWLNMLEKC DVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM

Query:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        N PEERKVRLATFLL KEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTY EAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------
        ERGLRFEIRTP+TAIAKWTNFSQLVET LRVEQSITEEKSAVEL RGTS ASGFRGR+QRRFTPGINISSRQDFKNRSGGQASRNVS             
Subjt:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------

Query:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP
                     QESIASTVRR PCT CGRNHRGQCLVG GVCYQCGQ GHFKKDCPQLNMTVQRDQGVGSQT+EQSRVSVVPTEGT GARQKGVVGRP
Subjt:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP

Query:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT
        RQQGKVYAMTQQE ED+P VITGT  ICNVPAD+LFDPGATHSFV SIFLTKLNRMLEPLSEGLAIY     TP G+ +L  E ++ C++ + G  + V 
Subjt:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT

Query:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP
        LL L++   DVILGMD+L A +AS+DC RKEV F  P      F+G     SRS++   + +  L                        P+V+++ DVFP
Subjt:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP

Query:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL
        ++LSGLPP REI+F +EL  GT PIS+APYRMA +ELKELK+QLQEL+DKG+IR SVSPWGAPVLFVK+KDG++ LC DYR+LNKVT++N+YPLPRI+DL
Subjt:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL

Query:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT
        FDQL GA +FSKIDLRSGYHQL++++ D+ KT+FR+RYGHYEF VM FGLTNAP VFMDLMNR+F  +LD FVIVFIDDIL+YS     HEEHLR+VLQT
Subjt:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT

Query:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN
        LR+ +LYAKFSKCEFWL QV          GVSVDP K+EA+ +W RP + +EVRSFLGLAGYYRRF+E+FSR+A PLT LTRK   F WS  CE SFQ 
Subjt:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL
        LK++LVTAP+L +P     +VIY DAS+ GLGCVLMQ G V+AYASRQLK H+ NY THDLELAAVVL
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL

KAA0066849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

73.45

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Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGE STL  RGGAGNEQFART +EIGR DRAEPSDPEKAYGIERLKKL ATVFEGSTDPADAENWLNMLEKC DVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM

Query:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        N PEERKVRLATFLL KEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTY EAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------
        ERGLRFEIRTP+TAIAKWTNFSQLVET LRVEQSITEEKSAVEL RGTS ASGFRGR+QRRFTPGINISSRQDFKNRSGGQASRNVS             
Subjt:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------

Query:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP
                     QESIASTVRR PCT CGRNHRGQCLVG GVCYQCGQ GHFKKDCPQLNMTVQRDQGVGSQT+EQSRVSVVPTEGT GARQKGVVGRP
Subjt:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP

Query:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT
        RQQGKVYAMTQQE ED+P VITGT  ICNVPAD+LFDPGATHSFV SIFLTKLNRMLEPLSEGLAIY     TP G+ +L  E ++ C++ + G  + V 
Subjt:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT

Query:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP
        LL L++   DVILGMD+L A +AS+DC RKEV F  P      F+G     SRS++   + +  L                        P+V+++ DVFP
Subjt:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP

Query:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL
        ++LSGLPP REI+F +EL  GT PIS+APYRMA +ELKELK+QLQEL+DKG+IR SVSPWGAPVLFVK+KDG++ LC DYR+LNKVT++N+YPLPRI+DL
Subjt:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL

Query:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT
        FDQL GAT+FSKIDLRSGYHQL++++ D+ KT+FR+RYGHYEF VM FGLTNAP VFMDLMNR+F  +LD FVIVFIDDIL+YS     HEEHLR+VLQT
Subjt:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT

Query:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN
        LR+ +LYAKFSKCEFWL QV          GVSVDP K+EA+ +W RP + +EVRSFLGLAGYYRRF+E+FSR+A PLT LTRK   F WS  CE SFQ 
Subjt:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL
        LK++LVTAP+L +P     +VIY DAS+ GLGCVLMQ G V+AYASRQLK H+ NY THDLELAAVVL
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL

TYK06334.1 putative polyprotein [Cucumis melo var. makuwa]

0.0e+00

73.35

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Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGE STL  RGGAGNEQFART +EIGR DRAEPSDPEKAYGIERLKKL ATVFEGSTDPADAENWLNMLEKC DVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM

Query:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        N PEERKVRLATFLL KEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTY EAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------
        ERGLRFEIRTP+TAIAKWTNFSQLVET LRVEQSITEEKSAVEL RGTS ASGFRGR+QRRFTPGINISSRQDFKNRSGGQASRNVS             
Subjt:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------

Query:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP
                     QESIASTVRR PCT CGRNHRGQCLVG GVCYQCGQ GHFKKDCPQLNMTVQRDQGVGSQT+EQSRVSVVPTEGT GARQKGVVGRP
Subjt:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP

Query:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT
        RQQGKVYAMTQQE ED+P VITGT  ICNVPAD+LFDPGATHSFV SIFLTKLNRMLEPLSEGLAIY     TP G+ +L  E ++ C++ + G  + V 
Subjt:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT

Query:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP
        LL L++   DVILGMD+L A +AS+DC RKEV F  P      F+G     SRS++   + +  L                        P+V+++ DVFP
Subjt:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP

Query:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL
        ++LSGLPP REI+F +EL  GT PIS+APYRMA +ELKELK+QLQEL+DKG+IR SVSPWGAPVLFVK+KDG++ LC DYR+LNKVT++N+YPLPRI+DL
Subjt:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL

Query:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT
        FDQL GA +FSKIDLRSGYHQL++++ D+ KT+FR+RYGHYEF VM FGLTNAP VFMDLMNR+F  +LD FVIVFIDDIL+YS     HEEHLR+VLQT
Subjt:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT

Query:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN
        LR+ +LYAKFSKCEFWL QV          GVSVDP K+EA+ +W RP + +EVRSFLGLAGYYRRF+E+FSR+A PLT LTRK   F WS  CE SFQ 
Subjt:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL
        LK++LVTAP+L +P     +VIY DAS+ GLGCVLMQ G V+AYASRQLK H+ NY THDLELAAVVL
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL

TYK27507.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0e+00

73.35

Show/hide

Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGE STL  RGGAGNEQFART +EIGR DRAEPSDPEKAYGIERLKKL ATVFEGSTDPADAENWLNMLEKC DVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM

Query:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        N PEERKVRLATFLL KEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTY EAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------
        ERGLRFEIRTP+TAIAKWTNFSQLVET LRVEQSITEEKSAVEL RGTS ASGFRGR+QRRFTPGINISSRQDFKNRSGGQASRNVS             
Subjt:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------

Query:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP
                     QESIASTVRR PCT CGRNHRGQCLVG GVCYQCGQ GHFKKDCPQLNMTVQRDQGVGSQT+EQSRVSVVPTEGT GARQKGVVGRP
Subjt:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP

Query:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT
        RQQGKVYAMTQQE ED+P VITGT  ICNVPAD+LFDPGATHSFV SIFLTKLNRMLEPLSEGLAIY     TP G+ +L  E ++ C++ + G  + V 
Subjt:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT

Query:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP
        LL L++   DVILGMD+L A +AS+DC RKEV F  P      F+G     SRS++   + +  L                        P+V+++ DVFP
Subjt:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP

Query:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL
        ++LSGLPP REI+F +EL  GT PIS+APYRMA +ELKELK+QLQEL+DKG+IR SVSPWGAPVLFVK+KDG++ LC DYR+LNKVT++N+YPLPRI+DL
Subjt:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL

Query:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT
        FDQL GA +FSKIDLRSGYHQL++++ D+ KT+FR+RYGHYEF VM FGLTNAP VFMDLMNR+F  +LD FVIVFIDDIL+YS     HEEHLR+VLQT
Subjt:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT

Query:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN
        LR+ +LYAKFSKCEFWL QV          GVSVDP K+EA+ +W RP + +EVRSFLGLAGYYRRF+E+FSR+A PLT LTRK   F WS  CE SFQ 
Subjt:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL
        LK++LVTAP+L +P     +VIY DAS+ GLGCVLMQ G V+AYASRQLK H+ NY THDLELAAVVL
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T1Y5 Reverse transcriptase

0.0e+00

73.35

Show/hide

Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGE STL  RGGAGNEQFART +EIGR DRAEPSDPEKAYGIERLKKL ATVFEGSTDPADAENWLNMLEKC DVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM

Query:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        N PEERKVRLATFLL KEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTY EAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------
        ERGLRFEIRTP+TAIAKWTNFSQLVET LRVEQSITEEKSAVEL RGTS ASGFRGR+QRRFTPGINISSRQDFKNRSGGQASRNVS             
Subjt:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------

Query:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP
                     QESIASTVRR PCT CGRNHRGQCLVG GVCYQCGQ GHFKKDCPQLNMTVQRDQGVGSQT+EQSRVSVVPTEGT GARQKGVVGRP
Subjt:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP

Query:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT
        RQQGKVYAMTQQE ED+P VITGT  ICNVPAD+LFDPGATHSFV SIFLTKLNRMLEPLSEGLAIY     TP G+ +L  E ++ C++ + G  + V 
Subjt:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT

Query:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP
        LL L++   DVILGMD+L A +AS+DC RKEV F  P      F+G     SRS++   + +  L                        P+V+++ DVFP
Subjt:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP

Query:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL
        ++LSGLPP REI+F +EL  GT PIS+APYRMA +ELKELK+QLQEL+DKG+IR SVSPWGAPVLFVK+KDG++ LC DYR+LNKVT++N+YPLPRI+DL
Subjt:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL

Query:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT
        FDQL GA +FSKIDLRSGYHQL++++ D+ KT+FR+RYGHYEF VM FGLTNAP VFMDLMNR+F  +LD FVIVFIDDIL+YS     HEEHLR+VLQT
Subjt:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT

Query:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN
        LR+ +LYAKFSKCEFWL QV          GVSVDP K+EA+ +W RP + +EVRSFLGLAGYYRRF+E+FSR+A PLT LTRK   F WS  CE SFQ 
Subjt:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL
        LK++LVTAP+L +P     +VIY DAS+ GLGCVLMQ G V+AYASRQLK H+ NY THDLELAAVVL
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL

A0A5A7U2V7 Reverse transcriptase

0.0e+00

73.35

Show/hide

Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGE STL  RGGAGNEQFART +EIGR DRAEPSDPEKAYGIERLKKL ATVFEGSTDPADAENWLNMLEKC DVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM

Query:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        N PEERKVRLATFLL KEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTY EAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------
        ERGLRFEIRTP+TAIAKWTNFSQLVET LRVEQSITEEKSAVEL RGTS ASGFRGR+QRRFTPGINISSRQDFKNRSGGQASRNVS             
Subjt:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------

Query:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP
                     QESIASTVRR PCT CGRNHRGQCLVG GVCYQCGQ GHFKKDCPQLNMTVQRDQGVGSQT+EQSRVSVVPTEGT GARQKGVVGRP
Subjt:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP

Query:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT
        RQQGKVYAMTQQE ED+P VITGT  ICNVPAD+LFDPGATHSFV SIFLTKLNRMLEPLSEGLAIY     TP G+ +L  E ++ C++ + G  + V 
Subjt:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT

Query:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP
        LL L++   DVILGMD+L A +AS+DC RKEV F  P      F+G     SRS++   + +  L                        P+V+++ DVFP
Subjt:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP

Query:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL
        ++LSGLPP REI+F +EL  GT PIS+APYRMA +ELKELK+QLQEL+DKG+IR SVSPWGAPVLFVK+KDG++ LC DYR+LNKVT++N+YPLPRI+DL
Subjt:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL

Query:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT
        FDQL GA +FSKIDLRSGYHQL++++ D+ KT+FR+RYGHYEF VM FGLTNAP VFMDLMNR+F  +LD FVIVFIDDIL+YS     HEEHLR+VLQT
Subjt:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT

Query:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN
        LR+ +LYAKFSKCEFWL QV          GVSVDP K+EA+ +W RP + +EVRSFLGLAGYYRRF+E+FSR+A PLT LTRK   F WS  CE SFQ 
Subjt:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL
        LK++LVTAP+L +P     +VIY DAS+ GLGCVLMQ G V+AYASRQLK H+ NY THDLELAAVVL
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL

A0A5A7VNK4 Reverse transcriptase

0.0e+00

73.45

Show/hide

Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGE STL  RGGAGNEQFART +EIGR DRAEPSDPEKAYGIERLKKL ATVFEGSTDPADAENWLNMLEKC DVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM

Query:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        N PEERKVRLATFLL KEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTY EAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------
        ERGLRFEIRTP+TAIAKWTNFSQLVET LRVEQSITEEKSAVEL RGTS ASGFRGR+QRRFTPGINISSRQDFKNRSGGQASRNVS             
Subjt:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------

Query:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP
                     QESIASTVRR PCT CGRNHRGQCLVG GVCYQCGQ GHFKKDCPQLNMTVQRDQGVGSQT+EQSRVSVVPTEGT GARQKGVVGRP
Subjt:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP

Query:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT
        RQQGKVYAMTQQE ED+P VITGT  ICNVPAD+LFDPGATHSFV SIFLTKLNRMLEPLSEGLAIY     TP G+ +L  E ++ C++ + G  + V 
Subjt:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT

Query:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP
        LL L++   DVILGMD+L A +AS+DC RKEV F  P      F+G     SRS++   + +  L                        P+V+++ DVFP
Subjt:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP

Query:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL
        ++LSGLPP REI+F +EL  GT PIS+APYRMA +ELKELK+QLQEL+DKG+IR SVSPWGAPVLFVK+KDG++ LC DYR+LNKVT++N+YPLPRI+DL
Subjt:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL

Query:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT
        FDQL GAT+FSKIDLRSGYHQL++++ D+ KT+FR+RYGHYEF VM FGLTNAP VFMDLMNR+F  +LD FVIVFIDDIL+YS     HEEHLR+VLQT
Subjt:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT

Query:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN
        LR+ +LYAKFSKCEFWL QV          GVSVDP K+EA+ +W RP + +EVRSFLGLAGYYRRF+E+FSR+A PLT LTRK   F WS  CE SFQ 
Subjt:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL
        LK++LVTAP+L +P     +VIY DAS+ GLGCVLMQ G V+AYASRQLK H+ NY THDLELAAVVL
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL

A0A5D3BHI1 Reverse transcriptase

0.0e+00

73.35

Show/hide

Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGE STL  RGGAGNEQFART +EIGR DRAEPSDPEKAYGIERLKKL ATVFEGSTDPADAENWLNMLEKC DVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM

Query:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        N PEERKVRLATFLL KEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTY EAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------
        ERGLRFEIRTP+TAIAKWTNFSQLVET LRVEQSITEEKSAVEL RGTS ASGFRGR+QRRFTPGINISSRQDFKNRSGGQASRNVS             
Subjt:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------

Query:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP
                     QESIASTVRR PCT CGRNHRGQCLVG GVCYQCGQ GHFKKDCPQLNMTVQRDQGVGSQT+EQSRVSVVPTEGT GARQKGVVGRP
Subjt:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP

Query:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT
        RQQGKVYAMTQQE ED+P VITGT  ICNVPAD+LFDPGATHSFV SIFLTKLNRMLEPLSEGLAIY     TP G+ +L  E ++ C++ + G  + V 
Subjt:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT

Query:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP
        LL L++   DVILGMD+L A +AS+DC RKEV F  P      F+G     SRS++   + +  L                        P+V+++ DVFP
Subjt:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP

Query:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL
        ++LSGLPP REI+F +EL  GT PIS+APYRMA +ELKELK+QLQEL+DKG+IR SVSPWGAPVLFVK+KDG++ LC DYR+LNKVT++N+YPLPRI+DL
Subjt:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL

Query:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT
        FDQL GA +FSKIDLRSGYHQL++++ D+ KT+FR+RYGHYEF VM FGLTNAP VFMDLMNR+F  +LD FVIVFIDDIL+YS     HEEHLR+VLQT
Subjt:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT

Query:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN
        LR+ +LYAKFSKCEFWL QV          GVSVDP K+EA+ +W RP + +EVRSFLGLAGYYRRF+E+FSR+A PLT LTRK   F WS  CE SFQ 
Subjt:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL
        LK++LVTAP+L +P     +VIY DAS+ GLGCVLMQ G V+AYASRQLK H+ NY THDLELAAVVL
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL

A0A5D3BS67 Reverse transcriptase

0.0e+00

73.35

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Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGE STL  RGGAGNEQFART +EIGR DRAEPSDPEKAYGIERLKKL ATVFEGSTDPADAENWLNMLEKC DVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVM

Query:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF
        N PEERKVRLATFLL KEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTY EAKRDEFLGLKQGSLSVAEYERKYTELSRYADVI+ASESDRCRRF
Subjt:  NRPEERKVRLATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRF

Query:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------
        ERGLRFEIRTP+TAIAKWTNFSQLVET LRVEQSITEEKSAVEL RGTS ASGFRGR+QRRFTPGINISSRQDFKNRSGGQASRNVS             
Subjt:  ERGLRFEIRTPITAIAKWTNFSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVS-------------

Query:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP
                     QESIASTVRR PCT CGRNHRGQCLVG GVCYQCGQ GHFKKDCPQLNMTVQRDQGVGSQT+EQSRVSVVPTEGT GARQKGVVGRP
Subjt:  -------------QESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKDCPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRP

Query:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT
        RQQGKVYAMTQQE ED+P VITGT  ICNVPAD+LFDPGATHSFV SIFLTKLNRMLEPLSEGLAIY     TP G+ +L  E ++ C++ + G  + V 
Subjt:  RQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAIYTSVVSTPSGECILSKEKVKACQIEIAGHVIEVT

Query:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP
        LL L++   DVILGMD+L A +AS+DC RKEV F  P      F+G     SRS++   + +  L                        P+V+++ DVFP
Subjt:  LLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKG---EGSRSVVDTREVDVSL---------------------SSEPMVRDYQDVFP

Query:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL
        ++LSGLPP REI+F +EL  GT PIS+APYRMA +ELKELK+QLQEL+DKG+IR SVSPWGAPVLFVK+KDG++ LC DYR+LNKVT++N+YPLPRI+DL
Subjt:  EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDL

Query:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT
        FDQL GA +FSKIDLRSGYHQL++++ D+ KT+FR+RYGHYEF VM FGLTNAP VFMDLMNR+F  +LD FVIVFIDDIL+YS     HEEHLR+VLQT
Subjt:  FDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQT

Query:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN
        LR+ +LYAKFSKCEFWL QV          GVSVDP K+EA+ +W RP + +EVRSFLGLAGYYRRF+E+FSR+A PLT LTRK   F WS  CE SFQ 
Subjt:  LRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL
        LK++LVTAP+L +P     +VIY DAS+ GLGCVLMQ G V+AYASRQLK H+ NY THDLELAAVVL
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVVL

SwissProt top hits

e value

%identity

Alignment

P04323 Retrovirus-related Pol polyprotein from transposon 17.6

2.3e-64

35.25

Show/hide

Query:  MVRDYQDVFPEELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFV-KRKDGS----MHLCHDYRELNK
        +++ Y D+   E   L    + K  +  +      S+  Y  A  +  E++ Q+Q++L++G IR S SP+ +P+  V K++D S      +  DYR+LN+
Subjt:  MVRDYQDVFPEELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFV-KRKDGS----MHLCHDYRELNK

Query:  VTVKNRYPLPRINDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSK
        +TV +R+P+P ++++  +L     F+ IDL  G+HQ+ +    V KT+F +++GHYE++ M FGL NAP  F   MN + R  L+   +V++DDI+++S 
Subjt:  VTVKNRYPLPRINDLFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSK

Query:  TEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG
        +  EH + L +V + L    L  +  KCEF  ++           G+  +P KIEAI  +P P+   E+++FLGL GYYR+F+ NF+ IA P+T+  +K 
Subjt:  TEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG

Query:  APFVWSKTCEDS-FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVV
             +    DS F+ LK  +   P+L VPD +  F + +DAS   LG VL Q G  ++Y SR L  H+ NYST + EL A+V
Subjt:  APFVWSKTCEDS-FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVV

P20825 Retrovirus-related Pol polyprotein from transposon 297

1.4e-64

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Query:  PISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKD-----GSMHLCHDYRELNKVTVKNRYPLPRINDLFDQLHGATVFSKIDLRSG
        PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V +K          +  DYR+LN++T+ +RYP+P ++++  +L     F+ IDL  G
Subjt:  PISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKD-----GSMHLCHDYRELNKVTVKNRYPLPRINDLFDQLHGATVFSKIDLRSG

Query:  YHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLR
        +HQ+ + +  + KT+F ++ GHYE++ M FGL NAP  F   MN + R  L+   +V++DDI+I+S +  EH   +++V   L D  L  +  KCEF  +
Subjt:  YHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLR

Query:  QV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK-TCEDSFQNLKQKLVTAPVLTVPDGS
        +           G+  +P K++AI S+P P+   E+R+FLGL GYYR+F+ N++ IA P+T   +K       K    ++F+ LK  ++  P+L +PD  
Subjt:  QV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK-TCEDSFQNLKQKLVTAPVLTVPDGS

Query:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVV
          FV+ +DAS   LG VL Q G  +++ SR L  H+ NYS  + EL A+V
Subjt:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHKQNYSTHDLELAAVV

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein

1.1e-61

36.36

Show/hide

Query:  PEELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRIND
        P +++ +P    +K  +E++ G       PY +     +E+   +Q+LLD  FI  S SP  +PV+ V +KDG+  LC DYR LNK T+ + +PLPRI++
Subjt:  PEELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRIND

Query:  LFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQ
        L  ++  A +F+ +DL SGYHQ+ ++  D  KT+F +  G YE+ VM FGL NAP+ F   M   FR+    FV V++DDILI+S++  EH +HL  VL+
Subjt:  LFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQ

Query:  TLRDNKLYAKFSKCEFWLRQ---VGVSVDPTKI-------EAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQ
         L++  L  K  KC+F   +   +G S+   KI        AI  +P P TV + + FLG+  YYRRF+ N S+IA P+       +   W++  + + +
Subjt:  TLRDNKLYAKFSKCEFWLRQ---VGVSVDPTKI-------EAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQ

Query:  NLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKSHKQNYSTHDLELAAVV
         LK  L  +PVL   +   ++ + +DASK G+G VL +         VV Y S+ L+S ++NY   +LEL  ++
Subjt:  NLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKSHKQNYSTHDLELAAVV

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus

5.9e-60

31.11

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Query:  GHVIEVTLLVLDML-DFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKGE-------GSRSVVDTREVDVSLSSEPMVRDYQDVFPEELSGLPPH
        G+  ++T  VL  L  FD I+G D L    A +D     +   P        +          +     T+E+  SL  E     +  +F   LSG+   
Subjt:  GHVIEVTLLVLDML-DFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKGE-------GSRSVVDTREVDVSLSSEPMVRDYQDVFPEELSGLPPH

Query:  REIKFVVELESGTV-PISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRK-----DGSMHLCHDYRELNKVTVKNRYPLPRINDLFDQ
          +K   E+ + T  PI    Y        E++ Q+ ELL  G IR S SP+ +P+  V +K     +    +  D++ LN VT+ + YP+P IN     
Subjt:  REIKFVVELESGTV-PISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRK-----DGSMHLCHDYRELNKVTVKNRYPLPRINDLFDQ

Query:  LHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRD
        L  A  F+ +DL SG+HQ+ +K+ D+PKT+F +  G YEF+ + FGL NAP +F  +++ + RE +     V+IDDI+++S+    H ++LR+VL +L  
Subjt:  LHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRD

Query:  NKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTR-----------KGAPFVWSK
          L     K  F   QV          G+  DP K+ AI+  P P++V E++ FLG+  YYR+F+++++++A PLT LTR              P    +
Subjt:  NKLYAKFSKCEFWLRQV----------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTR-----------KGAPFVWSK

Query:  TCEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKSHKQNYSTHDLELAAVV
        T   SF +LK  L ++ +L  P  +  F + +DAS   +G VL Q    + + +AY SR L   ++NY+T + E+ A++
Subjt:  TCEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKSHKQNYSTHDLELAAVV

Q99315 Transposon Ty3-G Gag-Pol polyprotein

1.4e-61

36.36

Show/hide

Query:  PEELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRIND
        P +++ +P    +K  +E++ G       PY +     +E+   +Q+LLD  FI  S SP  +PV+ V +KDG+  LC DYR LNK T+ + +PLPRI++
Subjt:  PEELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRIND

Query:  LFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQ
        L  ++  A +F+ +DL SGYHQ+ ++  D  KT+F +  G YE+ VM FGL NAP+ F   M   FR+    FV V++DDILI+S++  EH +HL  VL+
Subjt:  LFDQLHGATVFSKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQ

Query:  TLRDNKLYAKFSKCEFWLRQ---VGVSVDPTKI-------EAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQ
         L++  L  K  KC+F   +   +G S+   KI        AI  +P P TV + + FLG+  YYRRF+ N S+IA P+       +   W++  + +  
Subjt:  TLRDNKLYAKFSKCEFWLRQ---VGVSVDPTKI-------EAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQ

Query:  NLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKSHKQNYSTHDLELAAVV
         LK  L  +PVL   +   ++ + +DASK G+G VL +         VV Y S+ L+S ++NY   +LEL  ++
Subjt:  NLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKSHKQNYSTHDLELAAVV

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

7.7e-23

41.98

Show/hide

Query:  HLRMVLQTLRDNKLYAKFSKCEFWLRQV------------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL MVLQ    ++ YA   KC F   Q+            GVS DP K+EA+  WP P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLRQV------------GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKTCEDSFQNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKTCEDSFQNLKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCACCACGTACTGGCCGACGACGCCGGCAGAATCAGGACGGGATGCAAGGTCCTACACAAGGTCCATCTGTAGGGGAACCTAGTACCCTAAAACATCGAGGTGGGGC
AGGAAATGAGCAGTTTGCCAGAACTGCAGAGGAGATAGGAAGGCCAGATAGAGCAGAGCCTAGTGATCCAGAAAAGGCATACGGAATTGAACGGCTGAAGAAGTTAAGGG
CTACAGTGTTTGAGGGTTCAACAGATCCAGCTGATGCAGAGAATTGGTTGAATATGCTTGAAAAGTGTTTGGATGTGATGAATCGTCCTGAGGAGCGAAAGGTTAGATTG
GCCACATTTTTGTTGCTAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGGCGCAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGGCATATTCGAAGA
TAAGTATTATCCCAGCACATACTACGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCAC
GGTATGCTGACGTTATTGTGGCTTCTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGGTTGCGTTTTGAAATACGTACCCCAATTACAGCCATTGCTAAGTGGACGAAT
TTCTCTCAGTTAGTGGAGACTACCCTTCGTGTCGAGCAGAGTATAACAGAAGAAAAATCAGCAGTGGAGCTTTGTCGTGGGACTTCAATAGCTAGTGGATTTAGAGGCCG
TAAGCAGCGGAGGTTCACGCCTGGAATAAATATTTCAAGCCGTCAAGATTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGGAACGTGAGTCAGGAGTCCATTGCTAGTA
CAGTCAGGCGAACACCATGCACGGGTTGTGGCAGGAACCATCGGGGTCAGTGTTTAGTAGGTCCCGGTGTATGTTACCAGTGCGGACAGCAAGGACATTTCAAGAAAGAT
TGTCCGCAGTTGAACATGACAGTTCAGAGAGATCAGGGAGTTGGGTCCCAAACAGTTGAGCAATCGAGAGTTTCAGTGGTTCCAACAGAGGGCACCGGTGGTGCAAGGCA
AAAAGGAGTTGTTGGAAGACCTAGGCAACAGGGAAAGGTCTATGCTATGACTCAACAAGAAGCGGAGGACTCACCAGGCGTTATTACTGGTACGTTTCATATTTGTAATG
TACCTGCAGATCTTTTATTTGATCCAGGTGCTACGCATTCCTTTGTTTGTAGTATATTTCTAACTAAGCTGAATAGGATGCTAGAGCCTTTATCTGAGGGGTTAGCTATA
TACACTTCAGTTGTGTCTACTCCTTCTGGGGAGTGTATATTGTCGAAAGAAAAGGTGAAAGCATGTCAGATTGAGATAGCAGGTCATGTGATTGAAGTAACATTGTTAGT
CCTGGACATGCTCGACTTCGATGTAATTCTAGGTATGGATTGGCTAGCTGCTCGCCATGCTAGCATAGATTGTTCCCGTAAAGAGGTAGCGTTTAACCCTCCCTCGATGG
ACAGTTTTAAATTTAAGGGAGAAGGATCAAGGTCCGTGGTGGATACTAGAGAGGTTGATGTGTCCCTGTCATCAGAACCAATGGTAAGGGACTATCAGGATGTCTTTCCT
GAAGAACTTTCAGGGTTACCTCCTCACAGAGAGATTAAGTTTGTCGTAGAGTTGGAGTCGGGCACGGTTCCTATATCGAGAGCCCCATACAGAATGGCCACAGCAGAATT
GAAAGAGTTGAAAGTGCAGTTACAGGAGTTGCTTGATAAAGGCTTCATTCGACTGAGTGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTGAAGAGGAAGGATGGATCGA
TGCACCTATGTCATGATTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCAACGATCTGTTTGACCAGTTACATGGAGCTACAGTGTTC
TCTAAGATTGATCTTCGGTCGGGATATCATCAATTGAGGATTAAGGATGGTGATGTACCGAAGACATCCTTTCGTTCTAGATACGGACACTATGAGTTTATTGTGATGTC
TTTTGGTTTGACAAATGCTCCGACAGTGTTTATGGACTTGATGAACAGAGTGTTTAGAGAGTTCCTAGACACTTTTGTGATTGTGTTTATTGATGATATTTTGATATATT
CCAAGACAGAGGTCGAGCATGAGGAGCATTTACGTATGGTTCTACAAACCCTTCGAGATAATAAATTGTATGCAAAGTTCTCGAAATGTGAGTTTTGGTTGAGGCAGGTT
GGAGTTTCTGTGGATCCAACTAAGATAGAGGCAATTACCAGTTGGCCTCGACCATCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGATT
TGTGGAGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGACATGTGAGGACAGTTTCCAGAACCTTAAACAGA
AGCTAGTTACTGCACCGGTTCTTACTGTACCTGATGGTTCAGGGAGTTTCGTGATTTACAGTGATGCTTCTAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAG
GTAGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATAAGCAGAATTACTCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTGCACTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPPRTGRRRRQNQDGMQGPTQGPSVGEPSTLKHRGGAGNEQFARTAEEIGRPDRAEPSDPEKAYGIERLKKLRATVFEGSTDPADAENWLNMLEKCLDVMNRPEERKVRL
ATFLLLKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYYEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRFERGLRFEIRTPITAIAKWTN
FSQLVETTLRVEQSITEEKSAVELCRGTSIASGFRGRKQRRFTPGINISSRQDFKNRSGGQASRNVSQESIASTVRRTPCTGCGRNHRGQCLVGPGVCYQCGQQGHFKKD
CPQLNMTVQRDQGVGSQTVEQSRVSVVPTEGTGGARQKGVVGRPRQQGKVYAMTQQEAEDSPGVITGTFHICNVPADLLFDPGATHSFVCSIFLTKLNRMLEPLSEGLAI
YTSVVSTPSGECILSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAARHASIDCSRKEVAFNPPSMDSFKFKGEGSRSVVDTREVDVSLSSEPMVRDYQDVFP
EELSGLPPHREIKFVVELESGTVPISRAPYRMATAELKELKVQLQELLDKGFIRLSVSPWGAPVLFVKRKDGSMHLCHDYRELNKVTVKNRYPLPRINDLFDQLHGATVF
SKIDLRSGYHQLRIKDGDVPKTSFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFSKCEFWLRQV
GVSVDPTKIEAITSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKTCEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK
VVAYASRQLKSHKQNYSTHDLELAAVVLH

Pay0010311 (gene) of Melon (Payzawat) v1 genome