; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0010350 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0010350
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionDNA-directed RNA polymerase III subunit RPC4
Genome locationchr02:2443489..2446389
RNA-Seq ExpressionPay0010350
SyntenyPay0010350
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR007811 - DNA-directed RNA polymerase III subunit RPC4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055789.1 DNA-directed RNA polymerase III subunit RPC4 [Cucumis melo var. makuwa]4.5e-14493.52Show/hide
Query:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS

Query:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
        EQNSASQTRQKTCSMNELPSG M  + +       LK G     VSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
Subjt:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL

TYK10040.1 DNA-directed RNA polymerase III subunit RPC4 [Cucumis melo var. makuwa]3.0e-13589.42Show/hide
Query:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFN S            APTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS

Query:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
        EQNSASQTRQKTCSMNELPSGFM  + +       LK G     VSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
Subjt:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL

XP_004144123.1 DNA-directed RNA polymerase III subunit RPC4 [Cucumis sativus]1.4e-14893.52Show/hide
Query:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKNKTA PRKLKFAPKAP+RR+PKPEVKAE+AED DAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN TYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSS+VE+MGSGN S
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS

Query:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
        EQN ASQ RQKTCSMNELPSG +GKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAIN+EGK CCIVGELSKRAILTPDVDSML+NIEDL
Subjt:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL

XP_008450913.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Cucumis melo]8.5e-15999.66Show/hide
Query:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS

Query:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
        EQNSASQTRQKTCSMNELPSG MGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
Subjt:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL

XP_038878504.1 uncharacterized protein LOC120070724 [Benincasa hispida]4.7e-14188.4Show/hide
Query:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQDPPKNKTA PRKLKFAPKAPIRR+PKPEVKAE+AED DAAQARDLLKRFNEST R KQ++GRKAAPTQVAFGSGG+SSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
        TLP+STSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENF YDENTTT AM+LGLLEENPE DVFFLQLPPMVPM+KQSSTVE  G+ N  
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS

Query:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
        EQ+  SQ RQK C MNELPSG MGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQ+VAA+N+EGK CCIVGELSKRAILTPDVDS+L+NIEDL
Subjt:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL

TrEMBL top hitse value%identityAlignment
A0A0A0LWX7 Uncharacterized protein6.6e-14993.52Show/hide
Query:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQ+PPKNKTA PRKLKFAPKAP+RR+PKPEVKAE+AED DAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASEN TYDENTTTAAMNLGLLEENPE DV FLQLPPMVPMIKQSS+VE+MGSGN S
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS

Query:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
        EQN ASQ RQKTCSMNELPSG +GKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAIN+EGK CCIVGELSKRAILTPDVDSML+NIEDL
Subjt:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL

A0A1S3BPR1 DNA-directed RNA polymerase III subunit RPC44.1e-15999.66Show/hide
Query:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS

Query:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
        EQNSASQTRQKTCSMNELPSG MGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
Subjt:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL

A0A5A7UQN3 DNA-directed RNA polymerase III subunit RPC42.2e-14493.52Show/hide
Query:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS

Query:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
        EQNSASQTRQKTCSMNELPSG M  + +       LK G     VSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
Subjt:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL

A0A5D3CFB5 DNA-directed RNA polymerase III subunit RPC41.4e-13589.42Show/hide
Query:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFN S            APTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
Subjt:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
        TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS

Query:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
        EQNSASQTRQKTCSMNELPSGFM  + +       LK G     VSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
Subjt:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL

A0A6J1D2P1 DNA-directed RNA polymerase III subunit rpc41.1e-13282.59Show/hide
Query:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG
        MEQDPPKN T   RK+KFAPKAP RR+PKPEVKAE+ E+ DAAQA+DLLKRFNEST RAKQ+VG+KAAPTQVAFGSGG+S+T+RSYG+ KAGNRPRNEDG
Subjt:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDG

Query:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS
        TLP+S SKEYVEPWDYYSYYPVTLPLRRPYSG+PDSLNEEEFGEASEN TYDE+ TT AM+LGLLEENPET+VFFLQ+PPMVP+ KQSSTVE M + + S
Subjt:  TLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVS

Query:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
        EQ+  S+TRQ  CS+NELPSG MGKLLVYRSGAVKLKLGDI+YDVSSGMDCGFAQ+VAAIN+EGKHCCIVGELSKRAILTPDVDSML++IEDL
Subjt:  EQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL

SwissProt top hitse value%identityAlignment
O74857 DNA-directed RNA polymerase III subunit rpc46.0e-0626.59Show/hide
Query:  LNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVF-----FLQLPPMVPM---------IKQSSTVENMGSG---NVSEQNSASQTRQKTCSMNEL-
        +N+E+  E  E    D    + A +LGL E+    D F      +Q P  +P          +  SS V+   +G   +V E+    +  ++  ++++L 
Subjt:  LNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVF-----FLQLPPMVPM---------IKQSSTVENMGSG---NVSEQNSASQTRQKTCSMNEL-

Query:  ---------PSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPD
                 P+G +G L V++SG   L++G + + V SG DC F QE+A ++ + K    +G   +R I++PD
Subjt:  ---------PSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPD

P05423 DNA-directed RNA polymerase III subunit RPC41.7e-0829.01Show/hide
Query:  ETDVFFLQLPPMVP------MIKQSSTVENMGSGNV----SEQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAA
        E ++ FLQLP  +P       IK   T      G V     E++  ++  +  C++ +L  G +GKLL+ +SG V+L LG +  DV+ G  C F QE+ +
Subjt:  ETDVFFLQLPPMVP------MIKQSSTVENMGSGNV----SEQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAA

Query:  INMEGK---HCCIVGELSKRAILTPDVDSML
        + +         ++G +  + + +PD +S+L
Subjt:  INMEGK---HCCIVGELSKRAILTPDVDSML

Q5E9Z7 DNA-directed RNA polymerase III subunit RPC41.7e-0825.48Show/hide
Query:  PRNEDGTLPASTSKEYVEPWDYYSYYPVTLPLR--RPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVP------MIK
        P+ ED  +     K   EP D      +  PLR  R   G P  ++  E                    L  L    E ++ FLQLP  +P       IK
Subjt:  PRNEDGTLPASTSKEYVEPWDYYSYYPVTLPLR--RPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVP------MIK

Query:  QSSTVENMGSGNV----SEQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKH---CCIVGELSKRAIL
           T      G +     E++  ++  + TC++ +L  G +GKLL+ +SG V+L LG +  DV+ G  C F QE+ ++ +         ++G +  + + 
Subjt:  QSSTVENMGSGNV----SEQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKH---CCIVGELSKRAIL

Query:  TPDVDSML
        +P+ +S+L
Subjt:  TPDVDSML

Q8T1V7 DNA-directed RNA polymerase III subunit rpc41.1e-0433.33Show/hide
Query:  SMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEG-----KHCCIVGELSKRAILTPDVDSM
        S+ E+PSG +G L +Y+SG   LK+G + YD+SSG    F +EV     +G       C  +G  S+  +  P +  +
Subjt:  SMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEG-----KHCCIVGELSKRAILTPDVDSM

Q91WD1 DNA-directed RNA polymerase III subunit RPC46.4e-0827.48Show/hide
Query:  ETDVFFLQLPPMVP------MIKQSSTVENMGSGNV----SEQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAA
        + ++ FLQLP  +P       IK   T      G +     E++  ++  +  C++ +L  G +GKLL+ +SG V+L LG +  DV+ G  C F QE+ +
Subjt:  ETDVFFLQLPPMVP------MIKQSSTVENMGSGNV----SEQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAA

Query:  INMEGK---HCCIVGELSKRAILTPDVDSML
        + +         ++G +  + + +PD +S+L
Subjt:  INMEGK---HCCIVGELSKRAILTPDVDSML

Arabidopsis top hitse value%identityAlignment
AT4G25180.1 RNA polymerase III RPC47.2e-3934.09Show/hide
Query:  RKLKFAPKAPIRRVP-KPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNE-DGTLPAS------
        R+ +  P  P RR+P  P    E  ED +  +A    ++F+      + +   KA+  +VAF    S   +RS+GV K  ++P ++ + + PAS      
Subjt:  RKLKFAPKAPIRRVP-KPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNE-DGTLPAS------

Query:  ------------------TSKEYVEPWDY-YSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLE-ENPETDVFFLQLPPMVPMI
                          T  +YVEPWDY  SYYP  LPLR+P SG+ + L++EEFGE ++N  YDENT  +A  LGL   ++ +  +F  ++P  +P++
Subjt:  ------------------TSKEYVEPWDY-YSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLE-ENPETDVFFLQLPPMVPMI

Query:  KQSSTVENMGSGNVSEQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDS
        KQ+       +G  ++++    +   +     LP GFMGK+LVY+SGAVKLK+GD ++DVS G       +V AI+++G++C  +G  +K   +TPDV+S
Subjt:  KQSSTVENMGSGNVSEQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDS

Query:  MLRNIEDL
        +L    D+
Subjt:  MLRNIEDL

AT5G09380.1 RNA polymerase III RPC43.9e-6147.28Show/hide
Query:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDN-DAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED
        MEQ P      P RK+KFAPKAP +RVPKPEVK E+ EDN ++AQA +LL+R NE + R K +  +K   +QVA+  GG  ++ RS   +K  NR     
Subjt:  MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDN-DAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNED

Query:  GTLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNV
        G+  ++   EY EPWDYYSYYP+TLP+RRPY+G+P+ L+ EEF +A     + E++   A NLGL+E++ E  +FF++L P VP+   S+  EN+     
Subjt:  GTLPASTSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNV

Query:  SEQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL
        +  N      +KT  +  LP G+MGKLLVY+SGAVK+KLG+++YDVS G+   FAQ+V  +N E K+CC+VG++ K A+LTPD+DS+L++IE++
Subjt:  SEQNSASQTRQKTCSMNELPSGFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAAGATCCACCCAAAAACAAGACAGCTCCTCCAAGGAAGTTGAAATTTGCTCCAAAAGCACCTATCCGCCGTGTACCAAAACCTGAAGTCAAAGCAGAAATGGC
AGAGGACAATGATGCTGCTCAAGCCAGGGATTTACTAAAACGCTTCAATGAAAGCACCCAAAGGGCAAAGCAAAGAGTTGGGAGAAAAGCGGCACCTACACAAGTTGCGT
TTGGTTCTGGAGGTTCATCGAGCACCCTAAGATCATATGGTGTTTCAAAAGCTGGAAATAGACCAAGAAATGAAGATGGAACTCTTCCGGCTAGTACAAGCAAGGAGTAT
GTAGAACCATGGGATTATTACAGTTATTATCCTGTAACTCTTCCTCTGCGGAGACCATATTCGGGAAATCCAGATTCTCTAAACGAGGAAGAATTTGGTGAGGCTTCAGA
AAACTTCACGTATGATGAAAATACAACAACTGCAGCAATGAATCTTGGTCTATTGGAGGAGAACCCGGAGACAGATGTCTTCTTTTTACAATTACCACCTATGGTGCCTA
TGATAAAGCAATCTTCTACAGTAGAAAACATGGGGTCAGGCAATGTCTCAGAACAAAATAGCGCCTCACAAACTCGACAAAAAACCTGCTCTATGAATGAGTTACCTTCT
GGCTTCATGGGTAAACTGCTTGTGTATAGGAGTGGTGCTGTCAAGTTAAAGCTTGGAGATATCATATATGATGTTTCTTCTGGAATGGATTGTGGCTTTGCACAAGAAGT
TGCAGCTATCAATATGGAAGGGAAGCATTGCTGCATCGTTGGGGAGCTTAGCAAGCGTGCCATTTTAACACCAGACGTGGACTCAATGTTAAGGAATATTGAGGATTTAT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAAGATCCACCCAAAAACAAGACAGCTCCTCCAAGGAAGTTGAAATTTGCTCCAAAAGCACCTATCCGCCGTGTACCAAAACCTGAAGTCAAAGCAGAAATGGC
AGAGGACAATGATGCTGCTCAAGCCAGGGATTTACTAAAACGCTTCAATGAAAGCACCCAAAGGGCAAAGCAAAGAGTTGGGAGAAAAGCGGCACCTACACAAGTTGCGT
TTGGTTCTGGAGGTTCATCGAGCACCCTAAGATCATATGGTGTTTCAAAAGCTGGAAATAGACCAAGAAATGAAGATGGAACTCTTCCGGCTAGTACAAGCAAGGAGTAT
GTAGAACCATGGGATTATTACAGTTATTATCCTGTAACTCTTCCTCTGCGGAGACCATATTCGGGAAATCCAGATTCTCTAAACGAGGAAGAATTTGGTGAGGCTTCAGA
AAACTTCACGTATGATGAAAATACAACAACTGCAGCAATGAATCTTGGTCTATTGGAGGAGAACCCGGAGACAGATGTCTTCTTTTTACAATTACCACCTATGGTGCCTA
TGATAAAGCAATCTTCTACAGTAGAAAACATGGGGTCAGGCAATGTCTCAGAACAAAATAGCGCCTCACAAACTCGACAAAAAACCTGCTCTATGAATGAGTTACCTTCT
GGCTTCATGGGTAAACTGCTTGTGTATAGGAGTGGTGCTGTCAAGTTAAAGCTTGGAGATATCATATATGATGTTTCTTCTGGAATGGATTGTGGCTTTGCACAAGAAGT
TGCAGCTATCAATATGGAAGGGAAGCATTGCTGCATCGTTGGGGAGCTTAGCAAGCGTGCCATTTTAACACCAGACGTGGACTCAATGTTAAGGAATATTGAGGATTTAT
AATTATTCTCAGATGGCGAGATTTTTTCATAGACATCAATGTGTAGAGAAATAGAAATGGACGAGAGTAATATTCTTCATCAAAACCTTGAGAGGA
Protein sequenceShow/hide protein sequence
MEQDPPKNKTAPPRKLKFAPKAPIRRVPKPEVKAEMAEDNDAAQARDLLKRFNESTQRAKQRVGRKAAPTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDGTLPASTSKEY
VEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENFTYDENTTTAAMNLGLLEENPETDVFFLQLPPMVPMIKQSSTVENMGSGNVSEQNSASQTRQKTCSMNELPS
GFMGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINMEGKHCCIVGELSKRAILTPDVDSMLRNIEDL