| GenBank top hits | e value | %identity | Alignment |
|---|
| TYK06688.1 exosome complex component RRP42-like [Cucumis melo var. makuwa] | 2.0e-110 | 77.59 | Show/hide |
Query: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHA NSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
Subjt: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
Query: AFEVRLCGSFAPYGLYGL-RCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLV
AFE+R G P+ + L +CMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSG ALGA IDLSTLIVVE KLCWDLHIEGLV
Subjt: AFEVRLCGSFAPYGLYGL-RCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLV
Query: LSSEGNLLNALGAAIKANGS------TRVRMGGTEVI-ATMKTLWIFCPMRSLWTLGRGYHPAHGKGGGVGVDPSIIFEMISVGKNVSEE
LSSEGNLLNALGAAIK S T ++G +I AT++ S+ G+ K GGV VD SII MISVGK+VS+E
Subjt: LSSEGNLLNALGAAIKANGS------TRVRMGGTEVI-ATMKTLWIFCPMRSLWTLGRGYHPAHGKGGGVGVDPSIIFEMISVGKNVSEE
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| XP_004151651.2 exosome complex component RRP42 [Cucumis sativus] | 1.6e-64 | 51.91 | Show/hide |
Query: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
MVGLST EKLFIQ GI+QDLRTDGRGRLTYRPISIETDVISQANGS RVR+GG EV IATVK ++LGRPNP+Q DKGKVSISVDCSPTAE
Subjt: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
Query: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
AFE R G E+ + CLLGGKSG GAGIDLS+LIVVEGKLCWDL+IEGLV+
Subjt: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
Query: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
SSEGNLL+ALGAAIKA G +V + G I T+ TL M S ++ G+ K
Subjt: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
Query: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
GGVGVDPSII +MISVGK+VSEELLNKL+SEIV AEADE+E
Subjt: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
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| XP_008441268.1 PREDICTED: exosome complex component RRP42-like [Cucumis melo] | 1.1e-63 | 51.61 | Show/hide |
Query: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
MVGLST EKLFIQ GI+QDLRTDGRGRLTYRPISIETDVISQANGS RVR+GG EV IATVK ++LGRPNP+Q +KGKVSISVDCSP AE
Subjt: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
Query: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
AFE R G E+ + CLLGGKSG GAGIDLS+LIVVEGKLCWDL+IEGLVL
Subjt: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
Query: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
SSEGNLL+ALGAAIKA G +V + G I T+ TL M S ++ G+ K
Subjt: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
Query: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
GGVGVDPSII +MISVGKNVSEELLNKL+SEIV AE DE+E
Subjt: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
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| XP_022927940.1 exosome complex component RRP42 [Cucurbita moschata] | 2.3e-58 | 48.68 | Show/hide |
Query: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
M GLS EKLFIQ GI+QDLRTDGR RLTYRPIS+ETDVISQANGS RVR+GG EV IATVK ++LGRPN +Q DKGKVSI VDCSPTAE
Subjt: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
Query: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
FE R G E+ + CLLGGKSG GAGIDLS+LIVVEGKLCWDL+IEGLV+
Subjt: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
Query: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
SS+GNLL+ALGAAIKA G +V + G VI T+ TL M S ++ G+ K
Subjt: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
Query: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
GG GVDPS+I +MISVGK+VSE+LLNKL+SEI AEADE+E
Subjt: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
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| XP_038891978.1 exosome complex component RRP42 isoform X1 [Benincasa hispida] | 2.4e-60 | 49.56 | Show/hide |
Query: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
MVGLS EKLFIQ GI+QDLRTDGRGRLTYRPIS+ETDVISQANGS RVR+GG EV IATVK ++LGRPNP+Q DKGKVSISVDCSP AE
Subjt: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
Query: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
AFE R G E+ + CLLGGKSG GA IDLS+LIVVEGKLCWDL+IEGLV+
Subjt: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
Query: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
SSEGNLL+ALGAAIKA G +V + G I T+ TL M S ++ G+ K
Subjt: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
Query: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
GG G+DPSII +MISVGK+VSEELL+KL+SEIV A+ADE+E
Subjt: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LU91 Uncharacterized protein | 7.9e-65 | 51.91 | Show/hide |
Query: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
MVGLST EKLFIQ GI+QDLRTDGRGRLTYRPISIETDVISQANGS RVR+GG EV IATVK ++LGRPNP+Q DKGKVSISVDCSPTAE
Subjt: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
Query: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
AFE R G E+ + CLLGGKSG GAGIDLS+LIVVEGKLCWDL+IEGLV+
Subjt: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
Query: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
SSEGNLL+ALGAAIKA G +V + G I T+ TL M S ++ G+ K
Subjt: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
Query: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
GGVGVDPSII +MISVGK+VSEELLNKL+SEIV AEADE+E
Subjt: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
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| A0A1S3B3T5 exosome complex component RRP42-like | 5.1e-64 | 51.61 | Show/hide |
Query: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
MVGLST EKLFIQ GI+QDLRTDGRGRLTYRPISIETDVISQANGS RVR+GG EV IATVK ++LGRPNP+Q +KGKVSISVDCSP AE
Subjt: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
Query: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
AFE R G E+ + CLLGGKSG GAGIDLS+LIVVEGKLCWDL+IEGLVL
Subjt: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
Query: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
SSEGNLL+ALGAAIKA G +V + G I T+ TL M S ++ G+ K
Subjt: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
Query: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
GGVGVDPSII +MISVGKNVSEELLNKL+SEIV AE DE+E
Subjt: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
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| A0A5A7SRK6 Exosome complex component RRP42-like | 5.1e-64 | 51.61 | Show/hide |
Query: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
MVGLST EKLFIQ GI+QDLRTDGRGRLTYRPISIETDVISQANGS RVR+GG EV IATVK ++LGRPNP+Q +KGKVSISVDCSP AE
Subjt: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
Query: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
AFE R G E+ + CLLGGKSG GAGIDLS+LIVVEGKLCWDL+IEGLVL
Subjt: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
Query: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
SSEGNLL+ALGAAIKA G +V + G I T+ TL M S ++ G+ K
Subjt: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
Query: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
GGVGVDPSII +MISVGKNVSEELLNKL+SEIV AE DE+E
Subjt: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
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| A0A5D3C6A5 Exosome complex component RRP42-like | 9.6e-111 | 77.59 | Show/hide |
Query: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHA NSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
Subjt: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
Query: AFEVRLCGSFAPYGLYGL-RCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLV
AFE+R G P+ + L +CMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSG ALGA IDLSTLIVVE KLCWDLHIEGLV
Subjt: AFEVRLCGSFAPYGLYGL-RCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLV
Query: LSSEGNLLNALGAAIKANGS------TRVRMGGTEVI-ATMKTLWIFCPMRSLWTLGRGYHPAHGKGGGVGVDPSIIFEMISVGKNVSEE
LSSEGNLLNALGAAIK S T ++G +I AT++ S+ G+ K GGV VD SII MISVGK+VS+E
Subjt: LSSEGNLLNALGAAIKANGS------TRVRMGGTEVI-ATMKTLWIFCPMRSLWTLGRGYHPAHGKGGGVGVDPSIIFEMISVGKNVSEE
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| A0A6J1EQ99 exosome complex component RRP42 | 1.1e-58 | 48.68 | Show/hide |
Query: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
M GLS EKLFIQ GI+QDLRTDGR RLTYRPIS+ETDVISQANGS RVR+GG EV IATVK ++LGRPN +Q DKGKVSI VDCSPTAE
Subjt: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAEL
Query: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
FE R G E+ + CLLGGKSG GAGIDLS+LIVVEGKLCWDL+IEGLV+
Subjt: AFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVL
Query: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
SS+GNLL+ALGAAIKA G +V + G VI T+ TL M S ++ G+ K
Subjt: SSEGNLLNALGAAIKA----NGSTRVRM------------------------GGTEVIATM----------KTLWIFCPMRSLWTLG---RGYHPAHGKG
Query: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
GG GVDPS+I +MISVGK+VSE+LLNKL+SEI AEADE+E
Subjt: GGVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| Q15024 Exosome complex component RRP42 | 3.6e-14 | 24.17 | Show/hide |
Query: VGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELA
V LS EK++I G+ +DLR DGRG YR + +ETDV+S +GS RV++G ++++ +++G P + ++G + VDCS +A
Subjt: VGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELA
Query: FEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLS
FE R E+ T+ + + KS +DL TL + + CW L+++ L+L
Subjt: FEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLS
Query: SEGNLLNALGAAIKA----------------NGSTRVRMG---------GTEVIATMKTLWIF--------------CPMRSLW--TLGRGYHPAHGKGG
GNL +A+ A+KA GS + + E + + TL C + SL +G K G
Subjt: SEGNLLNALGAAIKA----------------NGSTRVRMG---------GTEVIATMKTLWIF--------------CPMRSLW--TLGRGYHPAHGKGG
Query: GVGVDPSIIFEMISVGKNVSEELLNKLNSEI
+DP IFEM+ GK V + L L S +
Subjt: GVGVDPSIIFEMISVGKNVSEELLNKLNSEI
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| Q54VM4 Putative exosome complex exonuclease RRP42 | 9.8e-12 | 29.03 | Show/hide |
Query: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGK-VSISVDCSPTAE
M +S E LFIQ G+ ++R+DGR R+ YR +IET I ANGS RV++ EV++ VK + ++ + N Q D K + SV+C P+A
Subjt: MVGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGK-VSISVDCSPTAE
Query: LAFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLV
FE G + + L +E+L + + ++ ++KE K G + D + +V GK W L+++ +V
Subjt: LAFEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLV
Query: LSSEGNLLNALGAAIKA
L S+GNL +AL A ++
Subjt: LSSEGNLLNALGAAIKA
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| Q5JIR7 Exosome complex component Rrp42 | 4.7e-06 | 26.11 | Show/hide |
Query: RTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELAFEVRLCGSFAPYGLYGLRC
R DGR YR + I+ +VI +A GS VR+G +V++ ++LG P P D+G ++ +V+ P A FE
Subjt: RTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELAFEVRLCGSFAPYGLYGLRC
Query: MVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLSSEGNLLNALG-AAIKANGS
P P ++ IE+ + G+ +DL L++V GKL + I+ VL GNLL+A G AI A S
Subjt: MVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLSSEGNLLNALG-AAIKANGS
Query: TRV
T++
Subjt: TRV
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| Q8PTT7 Exosome complex component Rrp42 | 3.9e-08 | 24.09 | Show/hide |
Query: LSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELAFE
++T +K +I + +D R DGRG +R + +ET+VIS+A GS +V +G +V++ + G P P D+G + +++ +P A FE
Subjt: LSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELAFE
Query: VRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLSSE
P P R D+ IE+ + G+ ID+ L + G+ W + I+ +L+++
Subjt: VRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLSSE
Query: GNLLNA-LGAAIKANGSTRV
GN+++A AAI A +T V
Subjt: GNLLNA-LGAAIKANGSTRV
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| Q9D0M0 Exosome complex exonuclease RRP42 | 3.0e-13 | 26.05 | Show/hide |
Query: VGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELA
V LS EK++I G+ +DLR DGRG YR + +ETDV+S +GS RV++G ++++ +++G P + ++G + VDCS A
Subjt: VGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELA
Query: FEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLS
FE R E+ T+ + + KS +DL +L + + CW L+++ L+L
Subjt: FEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLS
Query: SEGNLLNALGAAIKA
GNL +A+ A+KA
Subjt: SEGNLLNALGAAIKA
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT3G07750.1 3'-5'-exoribonuclease family protein | 3.9e-48 | 41.18 | Show/hide |
Query: VGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELA
+GLS E+ FI+ GI+QDLRTDGR RLTYRPI +ET VI QANGS RVRIGG +V IA+VK +++GRP+ +Q DKGKV++ +DCSPTAE
Subjt: VGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELA
Query: FEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLS
F R G E+ + CLLGGKSG GAGI+LS+L++ EGK+CWDL+I+GLV+S
Subjt: FEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLS
Query: SEGNLLNALGAAIKA----------NGSTRVR------------------MGGTEVIATMK---TLWIF-------CPMRSLWTLG---RGYHPAHGKGG
S+GNLL+ALGAAIKA N S V VI T+ T +I M S ++ G+ K
Subjt: SEGNLLNALGAAIKA----------NGSTRVR------------------MGGTEVIATMK---TLWIF-------CPMRSLWTLG---RGYHPAHGKGG
Query: GVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
G G+DPS+I +MISV K+V+E L++KL+SEI AEA EDE
Subjt: GVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
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| AT3G07750.2 3'-5'-exoribonuclease family protein | 3.9e-48 | 41.18 | Show/hide |
Query: VGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELA
+GLS E+ FI+ GI+QDLRTDGR RLTYRPI +ET VI QANGS RVRIGG +V IA+VK +++GRP+ +Q DKGKV++ +DCSPTAE
Subjt: VGLSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELA
Query: FEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLS
F R G E+ + CLLGGKSG GAGI+LS+L++ EGK+CWDL+I+GLV+S
Subjt: FEVRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLS
Query: SEGNLLNALGAAIKA----------NGSTRVR------------------MGGTEVIATMK---TLWIF-------CPMRSLWTLG---RGYHPAHGKGG
S+GNLL+ALGAAIKA N S V VI T+ T +I M S ++ G+ K
Subjt: SEGNLLNALGAAIKA----------NGSTRVR------------------MGGTEVIATMK---TLWIF-------CPMRSLWTLG---RGYHPAHGKGG
Query: GVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
G G+DPS+I +MISV K+V+E L++KL+SEI AEA EDE
Subjt: GVGVDPSIIFEMISVGKNVSEELLNKLNSEIVVAEADEDE
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| AT3G60500.1 3'-5'-exoribonuclease family protein | 8.2e-06 | 23.94 | Show/hide |
Query: LSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELAFE
L+ E F++ + +LR DGRG YR ++I+ + GS+ V++G V+ P KD RPN +G +SI + SP A+ +FE
Subjt: LSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELAFE
Query: VRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLSSE
G A +E+ I GL +D +L V+ GK+ W + I+ +L +
Subjt: VRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLSSE
Query: GNLLNALGAAIKA
GNL++A A A
Subjt: GNLLNALGAAIKA
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| AT3G60500.2 3'-5'-exoribonuclease family protein | 8.2e-06 | 23.94 | Show/hide |
Query: LSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELAFE
L+ E F++ + +LR DGRG YR ++I+ + GS+ V++G V+ P KD RPN +G +SI + SP A+ +FE
Subjt: LSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELAFE
Query: VRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLSSE
G A +E+ I GL +D +L V+ GK+ W + I+ +L +
Subjt: VRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLSSE
Query: GNLLNALGAAIKA
GNL++A A A
Subjt: GNLLNALGAAIKA
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| AT3G60500.3 3'-5'-exoribonuclease family protein | 8.2e-06 | 23.94 | Show/hide |
Query: LSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELAFE
L+ E F++ + +LR DGRG YR ++I+ + GS+ V++G V+ P KD RPN +G +SI + SP A+ +FE
Subjt: LSTEEKLFIQVGISQDLRTDGRGRLTYRPISIETDVISQANGSTRVRIGGIEVIIATVKGHAPNSPAKDSKLGRPNPIQHDKGKVSISVDCSPTAELAFE
Query: VRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLSSE
G A +E+ I GL +D +L V+ GK+ W + I+ +L +
Subjt: VRLCGSFAPYGLYGLRCMVEKLLHSCPFPERVDSCVWLVFVLFYGFIEVKETIGFLGGWCLLGGKSGLALGAGIDLSTLIVVEGKLCWDLHIEGLVLSSE
Query: GNLLNALGAAIKA
GNL++A A A
Subjt: GNLLNALGAAIKA
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