; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0010470 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0010470
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionDNA helicase
Genome locationchr06:9919730..9925074
RNA-Seq ExpressionPay0010470
SyntenyPay0010470
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0140657 - ATP-dependent activity (molecular function)
InterPro domainsIPR001650 - Helicase, C-terminal
IPR011545 - DEAD/DEAH box helicase domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR032284 - ATP-dependent DNA helicase RecQ, zinc-binding domain
IPR036388 - Winged helix-like DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57610.2 hypothetical protein Csa_009478 [Cucumis sativus]1.6e-10755.02Show/hide
Query:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS
        EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY                             QAN+SAAYLSANM WS+QQEIF DLSS
Subjt:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS

Query:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------
        DC+KYKLLYVTPEKVAK                                            L QK  K                                
Subjt:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------

Query:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN
                 ++ P TK                   + + LS            ECGHKAAFYHGSMDPAQRSFI KQWSKDEINII ATVAFGMGINKP+
Subjt:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN

Query:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL
        VRFVIH+SLPKSIEGY+Q                       IRVKHMISQGATEQSPLVSGYN TNLGSS RIL+TNTENLLRMVSYCENDVDCRRLLQL
Subjt:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL

Query:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV
        VHF EKFDPGNCKKTCDNCLKSTN IEKDV+D++KQLV
Subjt:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV

XP_008456059.1 PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X2 [Cucumis melo]3.9e-11158.07Show/hide
Query:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS
        EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY                             QAN+SAAYLSANM WS+QQEIF DLSS
Subjt:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS

Query:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------
        DCTKYKLLYVTPEKVAK                                            L QK  K                                
Subjt:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------

Query:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN
                 ++ P TK                   + + LS            ECGHKAAFYHGSMDPAQRSFI KQWSKDEINII ATVAFGMGINKP+
Subjt:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN

Query:  VRFVIHNSLPKSIEGYYQIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQLVHF-EKFDPGNCKKTCDNCLKST
        VRFVIH+SLPKSIEGY+QIRVKHMISQGATEQSPLVSGYN TNLGSS RIL+TNTENLLRMVSYCENDVDCRRLLQLVHF EKFDPGNCKKTCDNCLKS 
Subjt:  VRFVIHNSLPKSIEGYYQIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQLVHF-EKFDPGNCKKTCDNCLKST

Query:  NFIEKDVSDVTKQLV
        N IEKDV+D+ KQLV
Subjt:  NFIEKDVSDVTKQLV

XP_011651280.1 ATP-dependent DNA helicase Q-like 4A isoform X1 [Cucumis sativus]1.6e-10755.02Show/hide
Query:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS
        EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY                             QAN+SAAYLSANM WS+QQEIF DLSS
Subjt:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS

Query:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------
        DC+KYKLLYVTPEKVAK                                            L QK  K                                
Subjt:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------

Query:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN
                 ++ P TK                   + + LS            ECGHKAAFYHGSMDPAQRSFI KQWSKDEINII ATVAFGMGINKP+
Subjt:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN

Query:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL
        VRFVIH+SLPKSIEGY+Q                       IRVKHMISQGATEQSPLVSGYN TNLGSS RIL+TNTENLLRMVSYCENDVDCRRLLQL
Subjt:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL

Query:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV
        VHF EKFDPGNCKKTCDNCLKSTN IEKDV+D++KQLV
Subjt:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV

XP_031739099.1 ATP-dependent DNA helicase Q-like 4A isoform X2 [Cucumis sativus]1.6e-10755.02Show/hide
Query:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS
        EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY                             QAN+SAAYLSANM WS+QQEIF DLSS
Subjt:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS

Query:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------
        DC+KYKLLYVTPEKVAK                                            L QK  K                                
Subjt:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------

Query:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN
                 ++ P TK                   + + LS            ECGHKAAFYHGSMDPAQRSFI KQWSKDEINII ATVAFGMGINKP+
Subjt:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN

Query:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL
        VRFVIH+SLPKSIEGY+Q                       IRVKHMISQGATEQSPLVSGYN TNLGSS RIL+TNTENLLRMVSYCENDVDCRRLLQL
Subjt:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL

Query:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV
        VHF EKFDPGNCKKTCDNCLKSTN IEKDV+D++KQLV
Subjt:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV

XP_031739100.1 ATP-dependent DNA helicase Q-like 4A isoform X3 [Cucumis sativus]1.6e-10755.02Show/hide
Query:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS
        EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY                             QAN+SAAYLSANM WS+QQEIF DLSS
Subjt:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS

Query:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------
        DC+KYKLLYVTPEKVAK                                            L QK  K                                
Subjt:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------

Query:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN
                 ++ P TK                   + + LS            ECGHKAAFYHGSMDPAQRSFI KQWSKDEINII ATVAFGMGINKP+
Subjt:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN

Query:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL
        VRFVIH+SLPKSIEGY+Q                       IRVKHMISQGATEQSPLVSGYN TNLGSS RIL+TNTENLLRMVSYCENDVDCRRLLQL
Subjt:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL

Query:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV
        VHF EKFDPGNCKKTCDNCLKSTN IEKDV+D++KQLV
Subjt:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV

TrEMBL top hitse value%identityAlignment
A0A0A0L762 DNA helicase7.5e-10855.02Show/hide
Query:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS
        EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY                             QAN+SAAYLSANM WS+QQEIF DLSS
Subjt:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS

Query:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------
        DC+KYKLLYVTPEKVAK                                            L QK  K                                
Subjt:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------

Query:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN
                 ++ P TK                   + + LS            ECGHKAAFYHGSMDPAQRSFI KQWSKDEINII ATVAFGMGINKP+
Subjt:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN

Query:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL
        VRFVIH+SLPKSIEGY+Q                       IRVKHMISQGATEQSPLVSGYN TNLGSS RIL+TNTENLLRMVSYCENDVDCRRLLQL
Subjt:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL

Query:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV
        VHF EKFDPGNCKKTCDNCLKSTN IEKDV+D++KQLV
Subjt:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV

A0A1S3C1X6 DNA helicase1.9e-11158.07Show/hide
Query:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS
        EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY                             QAN+SAAYLSANM WS+QQEIF DLSS
Subjt:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS

Query:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------
        DCTKYKLLYVTPEKVAK                                            L QK  K                                
Subjt:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------

Query:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN
                 ++ P TK                   + + LS            ECGHKAAFYHGSMDPAQRSFI KQWSKDEINII ATVAFGMGINKP+
Subjt:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN

Query:  VRFVIHNSLPKSIEGYYQIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQLVHF-EKFDPGNCKKTCDNCLKST
        VRFVIH+SLPKSIEGY+QIRVKHMISQGATEQSPLVSGYN TNLGSS RIL+TNTENLLRMVSYCENDVDCRRLLQLVHF EKFDPGNCKKTCDNCLKS 
Subjt:  VRFVIHNSLPKSIEGYYQIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQLVHF-EKFDPGNCKKTCDNCLKST

Query:  NFIEKDVSDVTKQLV
        N IEKDV+D+ KQLV
Subjt:  NFIEKDVSDVTKQLV

A0A1S3C2C0 DNA helicase1.7e-10755.02Show/hide
Query:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS
        EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY                             QAN+SAAYLSANM WS+QQEIF DLSS
Subjt:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS

Query:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------
        DCTKYKLLYVTPEKVAK                                            L QK  K                                
Subjt:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------

Query:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN
                 ++ P TK                   + + LS            ECGHKAAFYHGSMDPAQRSFI KQWSKDEINII ATVAFGMGINKP+
Subjt:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN

Query:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL
        VRFVIH+SLPKSIEGY+Q                       IRVKHMISQGATEQSPLVSGYN TNLGSS RIL+TNTENLLRMVSYCENDVDCRRLLQL
Subjt:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL

Query:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV
        VHF EKFDPGNCKKTCDNCLKS N IEKDV+D+ KQLV
Subjt:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV

A0A1S3C2G2 DNA helicase1.7e-10755.02Show/hide
Query:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS
        EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY                             QAN+SAAYLSANM WS+QQEIF DLSS
Subjt:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS

Query:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------
        DCTKYKLLYVTPEKVAK                                            L QK  K                                
Subjt:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------

Query:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN
                 ++ P TK                   + + LS            ECGHKAAFYHGSMDPAQRSFI KQWSKDEINII ATVAFGMGINKP+
Subjt:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN

Query:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL
        VRFVIH+SLPKSIEGY+Q                       IRVKHMISQGATEQSPLVSGYN TNLGSS RIL+TNTENLLRMVSYCENDVDCRRLLQL
Subjt:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL

Query:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV
        VHF EKFDPGNCKKTCDNCLKS N IEKDV+D+ KQLV
Subjt:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV

A0A1S3C3L3 DNA helicase1.7e-10755.02Show/hide
Query:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS
        EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY                             QAN+SAAYLSANM WS+QQEIF DLSS
Subjt:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS

Query:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------
        DCTKYKLLYVTPEKVAK                                            L QK  K                                
Subjt:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQKLAK--------------------------------

Query:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN
                 ++ P TK                   + + LS            ECGHKAAFYHGSMDPAQRSFI KQWSKDEINII ATVAFGMGINKP+
Subjt:  ---------ALCPTTK-------------------MTWILSVASI--------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN

Query:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL
        VRFVIH+SLPKSIEGY+Q                       IRVKHMISQGATEQSPLVSGYN TNLGSS RIL+TNTENLLRMVSYCENDVDCRRLLQL
Subjt:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL

Query:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV
        VHF EKFDPGNCKKTCDNCLKS N IEKDV+D+ KQLV
Subjt:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV

SwissProt top hitse value%identityAlignment
O88700 Bloom syndrome protein homolog1.2e-3028.27Show/hide
Query:  KVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQA-----------------------------NMSAAYLSANMAWSQQQEIFTDLSSDCTKY
        K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQ                              ++ A YL+ +   S+   I+  LS      
Subjt:  KVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQA-----------------------------NMSAAYLSANMAWSQQQEIFTDLSSDCTKY

Query:  KLLYVTPEKVAKLNQKLA-----------------KALC-------------------------PTTKMT------------------------------
        KLLYVTPEKV   N+ ++                 +A C                         P   +T                              
Subjt:  KLLYVTPEKVAKLNQKLA-----------------KALC-------------------------PTTKMT------------------------------

Query:  --------------------W-----------ILSVASIEC----------GHKAAFYHGSMDPAQRSFILKQW-SKDEINIISATVAFGMGINKPNVRF
                            W           I  ++  EC          G  A  YH  +  + R  +  +W ++D   +I AT+AFGMGI+KP+VRF
Subjt:  --------------------W-----------ILSVASIEC----------GHKAAFYHGSMDPAQRSFILKQW-SKDEINIISATVAFGMGINKPNVRF

Query:  VIHNSLPKSIEGYYQIRVKHMISQGATEQSPLVSGYNCTNLGSSRRIL-----------KTNTENLLRMVSYCENDVDCRRLLQLVHF--EKFDPGNCKK
        VIH SLPKS+EGYYQ   +   +    E S  V  Y   ++   +R++           +T+  NL  MV YCEN  +CRR+  L +F  + F+P  CKK
Subjt:  VIHNSLPKSIEGYYQIRVKHMISQGATEQSPLVSGYNCTNLGSSRRIL-----------KTNTENLLRMVSYCENDVDCRRLLQLVHF--EKFDPGNCKK

Query:  ----TCDNCLKSTNFIEKDVSDVTKQLV
            +CDNC K+ ++  KDV+D  K ++
Subjt:  ----TCDNCLKSTNFIEKDVSDVTKQLV

P54132 Bloom syndrome protein4.6e-3027.29Show/hide
Query:  KVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQ-----------------------------ANMSAAYLSANMAWSQQQEIFTDLSSDCTKY
        K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQ                              ++ A YL+ +   S+   I+  LS      
Subjt:  KVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQ-----------------------------ANMSAAYLSANMAWSQQQEIFTDLSSDCTKY

Query:  KLLYVTPEKVAKLNQKLA-----------------KALC-------------------------PTTKMT------------------------------
        KLLYVTPEK+   N+ ++                 +A C                         P   +T                              
Subjt:  KLLYVTPEKVAKLNQKLA-----------------KALC-------------------------PTTKMT------------------------------

Query:  --------------------W-----------ILSVASIEC----------GHKAAFYHGSMDPAQRSFILKQW-SKDEINIISATVAFGMGINKPNVRF
                            W           I  ++  EC          G  A  YH  +  + R  + ++W ++D   +I AT+AFGMGI+KP+VRF
Subjt:  --------------------W-----------ILSVASIEC----------GHKAAFYHGSMDPAQRSFILKQW-SKDEINIISATVAFGMGINKPNVRF

Query:  VIHNSLPKSIEGYYQI--------RVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQLVHFEK--FDPGNCKK---
        VIH SLPKS+EGYYQ          + H +          +          +    +T+  NL  MV YCEN  +CRR+  L +F +  F+P  CKK   
Subjt:  VIHNSLPKSIEGYYQI--------RVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQLVHFEK--FDPGNCKK---

Query:  -TCDNCLKSTNFIEKDVSDVTKQLV
         +CDNC K+ ++  +DV+D  K +V
Subjt:  -TCDNCLKSTNFIEKDVSDVTKQLV

Q8L840 ATP-dependent DNA helicase Q-like 4A4.3e-8445.21Show/hide
Query:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS
        E NNKKVFGNHSFRPNQRE+INATMSG DVFVLMPTGGGKSLTY                             QAN+ AA LSA M W++Q +IF +L+S
Subjt:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS

Query:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQK-----------------------------------
        + +KYKLLYVTPEKVAK                                            L QK                                   
Subjt:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQK-----------------------------------

Query:  ------LAKALCPTTKMTW-----------------ILSVASIEC----------GHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN
              L  ++ P TK                    I  ++ ++C          GHKAAFYHGSM+P QR+FI  QWSKDEINII ATVAFGMGINKP+
Subjt:  ------LAKALCPTTKMTW-----------------ILSVASIEC----------GHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN

Query:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL
        VRFVIH+SLPKSIEGY+Q                       IRVKHMISQG  +QSP+ +GYN   + SS R+L+TNTENLLRMV YCEN+V+CRR LQL
Subjt:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL

Query:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV
        VH  EKFD  NCKKTCDNC  S + I+KDV+ +T+QLV
Subjt:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV

Q9DEY9 Bloom syndrome protein homolog4.2e-3128.27Show/hide
Query:  KVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQ-----------------------------ANMSAAYLSANMAWSQQQEIFTDLSSDCTKY
        K FG H FR NQ E INA + G D F+LMPTGGGKSL YQ                              ++ A YL+ +   ++   I+  LS      
Subjt:  KVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQ-----------------------------ANMSAAYLSANMAWSQQQEIFTDLSSDCTKY

Query:  KLLYVTPEKV------------------------------------------------------------AKLNQKLAKALCPTTKMT------------
        KLLYVTPEKV                                                            A  N ++ K +    KMT            
Subjt:  KLLYVTPEKV------------------------------------------------------------AKLNQKLAKALCPTTKMT------------

Query:  --------------------W-----------ILSVASIEC----------GHKAAFYHGSMDPAQRSFILKQW-SKDEINIISATVAFGMGINKPNVRF
                            W           I  ++  EC          G  A  YH  +  + R ++  +W ++D+  +I AT+AFGMGI+KP+VR+
Subjt:  --------------------W-----------ILSVASIEC----------GHKAAFYHGSMDPAQRSFILKQW-SKDEINIISATVAFGMGINKPNVRF

Query:  VIHNSLPKSIEGYYQIRVKHMISQGATEQSPLVSGYNCTNLGSSRRIL-----------KTNTENLLRMVSYCENDVDCRRLLQLVHF--EKFDPGNCKK
        VIH SLPKS+EGYYQ         G T    L   Y+  ++   RR++           +T+  NL  MV YCEN V+CRR+  L +F    F+P  CK+
Subjt:  VIHNSLPKSIEGYYQIRVKHMISQGATEQSPLVSGYNCTNLGSSRRIL-----------KTNTENLLRMVSYCENDVDCRRLLQLVHF--EKFDPGNCKK

Query:  ----TCDNCLKSTNFIEKDVSDVTKQLV
             CDNCL   N+  +DV+D    +V
Subjt:  ----TCDNCLKSTNFIEKDVSDVTKQLV

Q9FT70 ATP-dependent DNA helicase Q-like 4B3.4e-8144.98Show/hide
Query:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS
        E  NK VFGNHSFRPNQRE+INATMSG DVFVLMPTGGGKSLTY                             Q N+SAA LSA M W++Q EI  +LSS
Subjt:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS

Query:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQK------LAKALCPTTKM------------------
        + +KYKLLYVTPEKVAK                                            L QK      LA     TT +                  
Subjt:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQK------LAKALCPTTKM------------------

Query:  ------TW----------------------------ILSVASIEC----------GHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN
               W                            I  ++ ++C          GHKAAFYHGSMDP +R+F+ KQWSKDEINII ATVAFGMGINKP+
Subjt:  ------TW----------------------------ILSVASIEC----------GHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN

Query:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL
        VRFVIH+SLPKSIEGY+Q                       IRVKHMISQG   Q  +  GYNC    SS R+L+TNTENLLRMVSYCEN+VDCRR LQL
Subjt:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL

Query:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV
        VH  EKFD  NCK TCDNC  S   I+KDV+ + +QLV
Subjt:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV

Arabidopsis top hitse value%identityAlignment
AT1G10930.1 DNA helicase (RECQl4A)3.0e-8545.21Show/hide
Query:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS
        E NNKKVFGNHSFRPNQRE+INATMSG DVFVLMPTGGGKSLTY                             QAN+ AA LSA M W++Q +IF +L+S
Subjt:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS

Query:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQK-----------------------------------
        + +KYKLLYVTPEKVAK                                            L QK                                   
Subjt:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQK-----------------------------------

Query:  ------LAKALCPTTKMTW-----------------ILSVASIEC----------GHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN
              L  ++ P TK                    I  ++ ++C          GHKAAFYHGSM+P QR+FI  QWSKDEINII ATVAFGMGINKP+
Subjt:  ------LAKALCPTTKMTW-----------------ILSVASIEC----------GHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN

Query:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL
        VRFVIH+SLPKSIEGY+Q                       IRVKHMISQG  +QSP+ +GYN   + SS R+L+TNTENLLRMV YCEN+V+CRR LQL
Subjt:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL

Query:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV
        VH  EKFD  NCKKTCDNC  S + I+KDV+ +T+QLV
Subjt:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV

AT1G31360.1 RECQ helicase L21.2e-2525.73Show/hide
Query:  VFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQ-----------------------------ANMSAAYLSANMAWSQQQEIFTDLSSDCTKYK
        VFG   +R NQ+E+INA M+G DV V+M  GGGKSL YQ                               +SA  L++      ++ ++  L       K
Subjt:  VFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQ-----------------------------ANMSAAYLSANMAWSQQQEIFTDLSSDCTKYK

Query:  LLYVTPEKVAK---------------------------------------LNQKLAKALCPTTKMTWILSVAS---------------------------
        +LYVTPEKV+K                                        N  + K   P   M  + + A+                           
Subjt:  LLYVTPEKVAK---------------------------------------LNQKLAKALCPTTKMTWILSVAS---------------------------

Query:  ----------------------------------------IEC----------GHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPNVR
                                                 EC          G  A +YH  MD   R  +  +WSK+++ +I  TVAFGMGINKP+VR
Subjt:  ----------------------------------------IEC----------GHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPNVR

Query:  FVIHNSLPKSIEGYYQIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQLVHFEKFDPGNCKKTCDNCLKSTNFI
        FVIH+SL KS+E YYQ   +       +E        +     S      +  +NL  +V YC++   CRR     HF +    +C   CDNC  S+   
Subjt:  FVIHNSLPKSIEGYYQIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQLVHFEKFDPGNCKKTCDNCLKSTNFI

Query:  EKDVSDVTKQLV
        E DVSD++K +V
Subjt:  EKDVSDVTKQLV

AT1G31360.2 RECQ helicase L21.5e-2338.51Show/hide
Query:  ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPNVRFVIHNSLPKSIEGYYQIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKT
        E G  A +YH  MD   R  +  +WSK+++ +I  TVAFGMGINKP+VRFVIH+SL KS+E YYQ   +       +E        +     S      +
Subjt:  ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPNVRFVIHNSLPKSIEGYYQIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKT

Query:  NTENLLRMVSYCENDVDCRRLLQLVHFEKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV
          +NL  +V YC++   CRR     HF +    +C   CDNC  S+   E DVSD++K +V
Subjt:  NTENLLRMVSYCENDVDCRRLLQLVHFEKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV

AT1G60930.1 RECQ helicase L4B2.4e-8244.98Show/hide
Query:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS
        E  NK VFGNHSFRPNQRE+INATMSG DVFVLMPTGGGKSLTY                             Q N+SAA LSA M W++Q EI  +LSS
Subjt:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTY-----------------------------QANMSAAYLSANMAWSQQQEIFTDLSS

Query:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQK------LAKALCPTTKM------------------
        + +KYKLLYVTPEKVAK                                            L QK      LA     TT +                  
Subjt:  DCTKYKLLYVTPEKVAK--------------------------------------------LNQK------LAKALCPTTKM------------------

Query:  ------TW----------------------------ILSVASIEC----------GHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN
               W                            I  ++ ++C          GHKAAFYHGSMDP +R+F+ KQWSKDEINII ATVAFGMGINKP+
Subjt:  ------TW----------------------------ILSVASIEC----------GHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPN

Query:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL
        VRFVIH+SLPKSIEGY+Q                       IRVKHMISQG   Q  +  GYNC    SS R+L+TNTENLLRMVSYCEN+VDCRR LQL
Subjt:  VRFVIHNSLPKSIEGYYQ-----------------------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQL

Query:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV
        VH  EKFD  NCK TCDNC  S   I+KDV+ + +QLV
Subjt:  VHF-EKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLV

AT3G05740.1 RECQ helicase l11.3e-1930.24Show/hide
Query:  KYKLLYVTPEKVAKLNQKLAKALCPTTKMTWILSVASI---------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPNVRFVIH
        KY+++  T E + +L + L       + + + LS +           +C  K  +YH  +   QR  + ++W   E+ I+ AT+AFGMGI+K +VRFVIH
Subjt:  KYKLLYVTPEKVAKLNQKLAKALCPTTKMTWILSVASI---------ECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPNVRFVIH

Query:  NSLPKSIEGYYQ---------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQLVHF-EKFDPGNCKKT---CD
        N+L K++E YYQ         ++ + +      + S +V        G +    K+      +M  YCE   +CRR + L +F E FD   CK +   CD
Subjt:  NSLPKSIEGYYQ---------IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKTNTENLLRMVSYCENDVDCRRLLQLVHF-EKFDPGNCKKT---CD

Query:  NCLKS
        NC +S
Subjt:  NCLKS

AT3G05740.1 RECQ helicase l14.3e-0757.78Show/hide
Query:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQ
        E  N  +FGN  FRP Q +   A+M   D FVLMPTGGGKSL YQ
Subjt:  EANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTTCCCAATTGTTGCAAATAGCTCGTGAAGCTAATAACAAAAAAGTGTTCGGTAATCACTCATTTCGTCCAAATCAAAGAGAGGTCATTAATGCTACAATGAG
TGGGTATGATGTCTTTGTTTTAATGCCAACTGGAGGGGGAAAGAGCCTAACCTACCAGGCAAACATGTCGGCTGCTTACCTAAGTGCCAATATGGCGTGGAGTCAACAAC
AAGAAATTTTTACAGACTTGAGTTCTGATTGCACCAAATACAAGCTTCTGTATGTCACGCCAGAAAAAGTTGCTAAGTTAAATCAAAAGCTTGCAAAAGCCCTCTGCCCA
ACCACAAAAATGACCTGGATTCTCAGCGTTGCTTCTATTGAATGTGGACATAAAGCAGCCTTTTATCATGGTAGCATGGATCCCGCCCAACGCTCCTTCATTCTGAAGCA
ATGGAGCAAAGATGAAATTAATATAATTTCCGCTACAGTGGCTTTTGGAATGGGCATCAACAAGCCAAATGTTCGGTTTGTCATTCACAATTCTCTTCCAAAGTCAATTG
AAGGGTACTATCAGATACGAGTCAAGCATATGATTAGCCAAGGAGCCACTGAGCAAAGTCCTCTCGTATCTGGATATAATTGTACCAATCTGGGCAGCTCTAGAAGGATA
CTAAAGACCAACACTGAGAATCTTTTACGAATGGTGAGTTACTGTGAAAATGATGTTGATTGCCGGCGTTTGCTGCAACTTGTCCATTTTGAGAAGTTTGATCCTGGAAA
TTGCAAGAAAACATGTGATAATTGTTTGAAGTCCACAAATTTTATAGAAAAGGATGTCAGTGATGTCACTAAGCAACTGGTCTGGTGCAAAATTTTGCAATGTTCTGTTA
AACTTACTCTATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTTCCCAATTGTTGCAAATAGCTCGTGAAGCTAATAACAAAAAAGTGTTCGGTAATCACTCATTTCGTCCAAATCAAAGAGAGGTCATTAATGCTACAATGAG
TGGGTATGATGTCTTTGTTTTAATGCCAACTGGAGGGGGAAAGAGCCTAACCTACCAGGCAAACATGTCGGCTGCTTACCTAAGTGCCAATATGGCGTGGAGTCAACAAC
AAGAAATTTTTACAGACTTGAGTTCTGATTGCACCAAATACAAGCTTCTGTATGTCACGCCAGAAAAAGTTGCTAAGTTAAATCAAAAGCTTGCAAAAGCCCTCTGCCCA
ACCACAAAAATGACCTGGATTCTCAGCGTTGCTTCTATTGAATGTGGACATAAAGCAGCCTTTTATCATGGTAGCATGGATCCCGCCCAACGCTCCTTCATTCTGAAGCA
ATGGAGCAAAGATGAAATTAATATAATTTCCGCTACAGTGGCTTTTGGAATGGGCATCAACAAGCCAAATGTTCGGTTTGTCATTCACAATTCTCTTCCAAAGTCAATTG
AAGGGTACTATCAGATACGAGTCAAGCATATGATTAGCCAAGGAGCCACTGAGCAAAGTCCTCTCGTATCTGGATATAATTGTACCAATCTGGGCAGCTCTAGAAGGATA
CTAAAGACCAACACTGAGAATCTTTTACGAATGGTGAGTTACTGTGAAAATGATGTTGATTGCCGGCGTTTGCTGCAACTTGTCCATTTTGAGAAGTTTGATCCTGGAAA
TTGCAAGAAAACATGTGATAATTGTTTGAAGTCCACAAATTTTATAGAAAAGGATGTCAGTGATGTCACTAAGCAACTGGTCTGGTGCAAAATTTTGCAATGTTCTGTTA
AACTTACTCTATTATAG
Protein sequenceShow/hide protein sequence
MEASQLLQIAREANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQANMSAAYLSANMAWSQQQEIFTDLSSDCTKYKLLYVTPEKVAKLNQKLAKALCP
TTKMTWILSVASIECGHKAAFYHGSMDPAQRSFILKQWSKDEINIISATVAFGMGINKPNVRFVIHNSLPKSIEGYYQIRVKHMISQGATEQSPLVSGYNCTNLGSSRRI
LKTNTENLLRMVSYCENDVDCRRLLQLVHFEKFDPGNCKKTCDNCLKSTNFIEKDVSDVTKQLVWCKILQCSVKLTLL