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Pay0010472 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0010472
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRibosomal L18p/L5e family protein
Genome locationchr03:11737078..11738025
RNA-Seq ExpressionPay0010472
SyntenyPay0010472
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008097 - 5S rRNA binding (molecular function)
InterPro domainsIPR005484 - Ribosomal protein L18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646622.1 hypothetical protein Csa_005380 [Cucumis sativus]8.1e-5897.54Show/hide
Query:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
        MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVG KLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
Subjt:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM

Query:  VLPLFDSVQRSGIAVDGVEKLG
        VLPLFDSVQRSG+AVDG EKLG
Subjt:  VLPLFDSVQRSGIAVDGVEKLG
XP_004140885.1 uncharacterized protein LOC101204363 [Cucumis sativus]2.5e-5996.83Show/hide
Query:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
        MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVG KLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
Subjt:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM

Query:  VLPLFDSVQRSGIAVDGVEKLGKGSI
        VLPLFDSVQRSG+AVDG EKLG GSI
Subjt:  VLPLFDSVQRSGIAVDGVEKLGKGSI
XP_016900104.1 PREDICTED: uncharacterized protein LOC103488672 [Cucumis melo]2.1e-61100Show/hide
Query:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
        MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
Subjt:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM

Query:  VLPLFDSVQRSGIAVDGVEKLGKGSI
        VLPLFDSVQRSGIAVDGVEKLGKGSI
Subjt:  VLPLFDSVQRSGIAVDGVEKLGKGSI
XP_038884098.1 uncharacterized protein LOC120075027 isoform X5 [Benincasa hispida]4.0e-5792.8Show/hide
Query:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
        MSI+QNHLLRLVLSCRKITAQVTNPATSSI+AMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVG KLGHRLKEIGVSDVRIDLAEE SRP+YYRKM
Subjt:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM

Query:  VLPLFDSVQRSGIAVDGVEKLGKGS
        VLPLFDSVQRSG+AVDG EKLG G+
Subjt:  VLPLFDSVQRSGIAVDGVEKLGKGS
XP_038884099.1 uncharacterized protein LOC120075027 isoform X6 [Benincasa hispida]4.0e-5792.8Show/hide
Query:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
        MSI+QNHLLRLVLSCRKITAQVTNPATSSI+AMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVG KLGHRLKEIGVSDVRIDLAEE SRP+YYRKM
Subjt:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM

Query:  VLPLFDSVQRSGIAVDGVEKLGKGS
        VLPLFDSVQRSG+AVDG EKLG G+
Subjt:  VLPLFDSVQRSGIAVDGVEKLGKGS
TrEMBL top hitse value%identityAlignment
A0A0A0KE39 Uncharacterized protein1.2e-5996.83Show/hide
Query:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
        MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVG KLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
Subjt:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM

Query:  VLPLFDSVQRSGIAVDGVEKLGKGSI
        VLPLFDSVQRSG+AVDG EKLG GSI
Subjt:  VLPLFDSVQRSGIAVDGVEKLGKGSI
A0A1S4DVU4 uncharacterized protein LOC1034886721.0e-61100Show/hide
Query:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
        MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
Subjt:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM

Query:  VLPLFDSVQRSGIAVDGVEKLGKGSI
        VLPLFDSVQRSGIAVDGVEKLGKGSI
Subjt:  VLPLFDSVQRSGIAVDGVEKLGKGSI
A0A5D3BWW4 Uncharacterized protein1.0e-61100Show/hide
Query:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
        MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
Subjt:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM

Query:  VLPLFDSVQRSGIAVDGVEKLGKGSI
        VLPLFDSVQRSGIAVDGVEKLGKGSI
Subjt:  VLPLFDSVQRSGIAVDGVEKLGKGSI
A0A6J1EVG7 uncharacterized protein LOC1114363401.0e-5388.1Show/hide
Query:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
        MSINQNHLLRLVLSCRKITAQVTNP TS+IIAMASSSEQEFVAY RSKLHRFPRSNNFWDSK+ASRVG KLGHRLKEIGVSDVRIDLAEELSRP+ YR  
Subjt:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM

Query:  VLPLFDSVQRSGIAVDGVEKLGKGSI
        VLPLFDSV+RSG+AV+G EKLG G+I
Subjt:  VLPLFDSVQRSGIAVDGVEKLGKGSI
A0A6J1JZ79 uncharacterized protein LOC1114887453.1e-5588.89Show/hide
Query:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM
        MSINQNHLLRLVLSCRKITAQVTNP TS+IIAMASSSEQEFVAYY SKLHRFPRSNNFWDSK+ASRVG KLGHRLKEIGVSDVRIDLAEELSRP+YYR  
Subjt:  MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKM

Query:  VLPLFDSVQRSGIAVDGVEKLGKGSI
        VLPLFDSV+RSG+AV+G EKLG G+I
Subjt:  VLPLFDSVQRSGIAVDGVEKLGKGSI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G43310.1 Ribosomal L18p/L5e family protein4.3e-4168.29Show/hide
Query:  NQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLP
        +++HLL+LVLSCRKITAQVT P +S+IIAMASSSEQEF+A  R+ L+RFP SN+FWDSK ASRVG KLG RL+E+GV  V ID  EE+SRPI++RK VLP
Subjt:  NQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLP

Query:  LFDSVQRSGIAVDGVEKLGKGSI
        LFDSV+R+GI VDG E+L   S+
Subjt:  LFDSVQRSGIAVDGVEKLGKGSI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATTAACCAAAACCACCTCCTCCGCCTTGTTCTTTCCTGCCGGAAAATCACCGCCCAGGTCACCAATCCAGCCACCTCCTCCATCATCGCCATGGCTTCTTCCTC
CGAGCAGGAATTCGTCGCCTATTACCGCTCCAAACTCCACCGCTTTCCTCGATCCAACAATTTCTGGGATTCCAAAGTCGCCTCTCGCGTCGGCATAAAGCTTGGCCACC
GTTTGAAGGAGATCGGCGTCTCCGATGTTCGGATTGATCTCGCTGAAGAACTCTCCCGCCCTATTTACTACCGGAAGATGGTTCTGCCGCTCTTCGATTCTGTTCAGCGC
TCCGGCATCGCCGTTGATGGGGTTGAGAAGCTTGGAAAAGGTTCGATCTAG
mRNA sequenceShow/hide mRNA sequence
TAAAAGCTTAAAAGAGGTTGGGAAAATTAGATTTTTCTAAAAAGGTTAGTTTTGGAAATAAAAAAAGGTTAAAAATAAAAAATTCTCCAATATAAAATTATGATTTCCAA
ATTGTTCAAACAAAGTTCAATGGGAGAAGATAATAGAAGGCGATTTTGAAGCCCTAATAAATACGCCCAGTTCCTCATCATGTCCATTAACCAAAACCACCTCCTCCGCC
TTGTTCTTTCCTGCCGGAAAATCACCGCCCAGGTCACCAATCCAGCCACCTCCTCCATCATCGCCATGGCTTCTTCCTCCGAGCAGGAATTCGTCGCCTATTACCGCTCC
AAACTCCACCGCTTTCCTCGATCCAACAATTTCTGGGATTCCAAAGTCGCCTCTCGCGTCGGCATAAAGCTTGGCCACCGTTTGAAGGAGATCGGCGTCTCCGATGTTCG
GATTGATCTCGCTGAAGAACTCTCCCGCCCTATTTACTACCGGAAGATGGTTCTGCCGCTCTTCGATTCTGTTCAGCGCTCCGGCATCGCCGTTGATGGGGTTGAGAAGC
TTGGAAAAGGTTCGATCTAGCCTCGACTCTTATTTTTTCCGATCGGAGCTTGTACGTTTCGCGATTGAGATTGAATTTAGGGCACATATAATTGCTTATCCTCCATGTCG
ATTTATCATACCAATTTTGACTCATTTTCGATCTTTCTTTTGGATTCAAATTGTAATAATATAAATTGTTTTCATAATTAGTGAAAGAAATAGAGAAGAGACCAATTTCC
CCTTTGGAATTTTGGCCATTTTGTCCTTGGCAGTGTTGAACTGCCTACAGATTATACTTGGCTGAAAAAAAAGGTAGCTATTGTAATTAGACAATATTTTTTTAAATAAC
TCCTAACGTCGATGAATGTATCAAAACAAAACATTGAAGTTTAATTTGATTCAATTATTAATTTGGGA
Protein sequenceShow/hide protein sequence
MSINQNHLLRLVLSCRKITAQVTNPATSSIIAMASSSEQEFVAYYRSKLHRFPRSNNFWDSKVASRVGIKLGHRLKEIGVSDVRIDLAEELSRPIYYRKMVLPLFDSVQR
SGIAVDGVEKLGKGSI