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Pay0010562 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0010562
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTubulin alpha chain
Genome locationchr07:29198417..29216416
RNA-Seq ExpressionPay0010562
SyntenyPay0010562
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576903.1 hypothetical protein SDJN03_24477, partial [Cucurbita argyrosperma subsp. sororia]4.5e-9685.59Show/hide
Query:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN
        MA LQILKST+S PSIS P FGSQS+RFFS+ DS     LLHGRRRSLR  CV RR SFRCAA+D+DKESNGEEPPESLFMKELKKRGITPTSLLEDT+N
Subjt:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN

Query:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPP
        +DFGLGGEM GENRDFSRRSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF LYFF G SF+HDG KTPISPP
Subjt:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPP

Query:  PYVDPYALLEDERISQIAPPVN
        PYVDPYALLEDERISQ+AP VN
Subjt:  PYVDPYALLEDERISQIAPPVN

XP_004150271.1 uncharacterized protein LOC101221726 [Cucumis sativus]3.6e-10693.55Show/hide
Query:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDSLLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG
        MA+LQILKS+LSLPSISH NFGSQSTRF SDFDSLLLHGRRRSLR ACV RRF+FRCAAKD DKE+NGEEPPESLFMKELKKRGITPTSLLEDTN+SDF 
Subjt:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDSLLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG

Query:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDGKTPISPPPYVDP
        LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFF G+SFIHDG+TPISPPPYVDP
Subjt:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDGKTPISPPPYVDP

Query:  YALLEDERISQIAPPVN
        YALLEDERISQIAPPVN
Subjt:  YALLEDERISQIAPPVN

XP_008454422.1 PREDICTED: uncharacterized protein LOC103494832 [Cucumis melo]9.6e-115100Show/hide
Query:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDSLLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG
        MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDSLLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG
Subjt:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDSLLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG

Query:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDGKTPISPPPYVDP
        LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDGKTPISPPPYVDP
Subjt:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDGKTPISPPPYVDP

Query:  YALLEDERISQIAPPVN
        YALLEDERISQIAPPVN
Subjt:  YALLEDERISQIAPPVN

XP_022984914.1 uncharacterized protein LOC111483048 [Cucurbita maxima]2.6e-9685.59Show/hide
Query:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN
        MA LQILKST+S PSIS P FGSQS+RFFS+ DS    +LLHGRRRSLR  CV RR SFRCAA+D+DKESNGEEPPESLFMKELKKRGITPTSLLEDT+N
Subjt:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN

Query:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPP
        +DFGLGGEM GENRDFSRRSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF LYFF G SF+HDG KTPISPP
Subjt:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPP

Query:  PYVDPYALLEDERISQIAPPVN
        PYVDPYALLEDERISQ+AP VN
Subjt:  PYVDPYALLEDERISQIAPPVN

XP_038905067.1 uncharacterized protein LOC120091218 isoform X1 [Benincasa hispida]8.7e-10088.29Show/hide
Query:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN
        MA+LQILKST+S PSIS PNFG QS+RFFSD DS    +LLHGRRRSLR  CVCRR SFRCAA+DADK+SNGEEPPESLFMKELKKRGITPTSLLEDTNN
Subjt:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN

Query:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPP
        SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFF LYFFFG+SF+HDG +T ISPP
Subjt:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPP

Query:  PYVDPYALLEDERISQIAPPVN
         YVDPYALLE+ERISQ APPVN
Subjt:  PYVDPYALLEDERISQIAPPVN

TrEMBL top hitse value%identityAlignment
A0A0A0KY14 Uncharacterized protein1.8e-10693.55Show/hide
Query:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDSLLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG
        MA+LQILKS+LSLPSISH NFGSQSTRF SDFDSLLLHGRRRSLR ACV RRF+FRCAAKD DKE+NGEEPPESLFMKELKKRGITPTSLLEDTN+SDF 
Subjt:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDSLLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG

Query:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDGKTPISPPPYVDP
        LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFF G+SFIHDG+TPISPPPYVDP
Subjt:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDGKTPISPPPYVDP

Query:  YALLEDERISQIAPPVN
        YALLEDERISQIAPPVN
Subjt:  YALLEDERISQIAPPVN

A0A1S3BY38 uncharacterized protein LOC1034948324.6e-115100Show/hide
Query:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDSLLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG
        MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDSLLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG
Subjt:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDSLLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFG

Query:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDGKTPISPPPYVDP
        LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDGKTPISPPPYVDP
Subjt:  LGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDGKTPISPPPYVDP

Query:  YALLEDERISQIAPPVN
        YALLEDERISQIAPPVN
Subjt:  YALLEDERISQIAPPVN

A0A6J1D5D9 uncharacterized protein LOC1110177632.6e-9482.81Show/hide
Query:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN
        MA+LQ+LKS +S  SIS PNFG +S+RF S  DS    +  HGRRRSLR  CVCRR SFRCAA+DADKESNGEEPPESLFMKELKKRG+TPTSLLED+N+
Subjt:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN

Query:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDGKTPISPPP
        +DFGLGGEMTGE RDFS RSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI+ITVSFFF LYFFFG SF+H+G+TPISPPP
Subjt:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDGKTPISPPP

Query:  YVDPYALLEDERISQIAPPVN
        YVDPYALLEDERISQ AP VN
Subjt:  YVDPYALLEDERISQIAPPVN

A0A6J1E457 uncharacterized protein LOC1114306404.8e-9685.14Show/hide
Query:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN
        MA LQILKST+S PSIS P FGSQS+RFFS+ DS     LLHGRRRSLR  CV RR SFRCAA+D+DKESNGEEPPESLFMKELKKRGITPTSLLEDT+N
Subjt:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN

Query:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPP
        +DFGLGGEM GENRDFSRRSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF LYFF G SF+HDG KTPISPP
Subjt:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPP

Query:  PYVDPYALLEDERISQIAPPVN
        PYVDPYALLEDER+SQ+AP VN
Subjt:  PYVDPYALLEDERISQIAPPVN

A0A6J1JBV1 uncharacterized protein LOC1114830481.3e-9685.59Show/hide
Query:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN
        MA LQILKST+S PSIS P FGSQS+RFFS+ DS    +LLHGRRRSLR  CV RR SFRCAA+D+DKESNGEEPPESLFMKELKKRGITPTSLLEDT+N
Subjt:  MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNN

Query:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPP
        +DFGLGGEM GENRDFSRRSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF LYFF G SF+HDG KTPISPP
Subjt:  SDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPP

Query:  PYVDPYALLEDERISQIAPPVN
        PYVDPYALLEDERISQ+AP VN
Subjt:  PYVDPYALLEDERISQIAPPVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G50020.1 unknown protein1.7e-4862.96Show/hide
Query:  AAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTN-NSDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGG
        A    D +S GEEPPESLFMKELK+RG+TPTSLL+D   + D    G+ TG +   S+ +A +   +KSL NQRERS+ LNSEGLEGLIPRA++LLTIGG
Subjt:  AAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTN-NSDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGG

Query:  TFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPPPYVDPYALLEDERISQIAPPVN
        TFFLGFWPLI++T+  F  LY +FG+ FIHDG +TP+SPPPY+DPYALLEDERIS + P +N
Subjt:  TFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPPPYVDPYALLEDERISQIAPPVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCTTCAAATTCTCAAATCAACTCTCTCTCTTCCTTCCATCTCTCACCCGAATTTTGGCTCTCAATCAACCCGCTTCTTCTCTGACTTTGATTCCCTACTCCT
TCATGGACGTCGGAGGAGTTTGCGTGTTGCCTGCGTTTGTAGAAGGTTCAGTTTCCGCTGCGCTGCTAAAGATGCTGATAAGGAAAGCAATGGAGAAGAACCTCCAGAAT
CATTATTCATGAAGGAATTGAAGAAGAGAGGCATAACTCCCACTTCCTTGCTTGAGGATACTAACAACAGTGACTTTGGACTTGGTGGCGAGATGACTGGAGAAAACAGA
GATTTCTCCCGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGTCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCG
TGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCATCATAACTGTTTCGTTCTTTTTTGGTTTATATTTTTTTTTCGGATCCTCTT
TTATTCACGATGGCAAAACGCCGATATCTCCTCCACCGTATGTTGACCCATATGCTCTTTTAGAGGACGAGAGAATTTCACAAATAGCTCCTCCTGTAAATTGA
mRNA sequenceShow/hide mRNA sequence
TTTCATTTTTGTTTTTGCGTCTCATTGTGGAAAAATTAAGATGAAACTATTTCTCCCATTGAATTCCGCTATCTAATTAATCTATGGCTTCTCTTCAAATTCTCAAATCA
ACTCTCTCTCTTCCTTCCATCTCTCACCCGAATTTTGGCTCTCAATCAACCCGCTTCTTCTCTGACTTTGATTCCCTACTCCTTCATGGACGTCGGAGGAGTTTGCGTGT
TGCCTGCGTTTGTAGAAGGTTCAGTTTCCGCTGCGCTGCTAAAGATGCTGATAAGGAAAGCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAATTGAAGAAGA
GAGGCATAACTCCCACTTCCTTGCTTGAGGATACTAACAACAGTGACTTTGGACTTGGTGGCGAGATGACTGGAGAAAACAGAGATTTCTCCCGTAGAAGTGCTGTTTCA
ACTGAAGTTAACAAGAGTCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGG
AACGTTCTTCTTAGGATTCTGGCCGTTGATCATCATAACTGTTTCGTTCTTTTTTGGTTTATATTTTTTTTTCGGATCCTCTTTTATTCACGATGGCAAAACGCCGATAT
CTCCTCCACCGTATGTTGACCCATATGCTCTTTTAGAGGACGAGAGAATTTCACAAATAGCTCCTCCTGTAAATTGACTGCTGCACAATCCTAATTGTTGATAGTTGAAG
CTGTAAAACCTTCGATCATTCACATGTATGAGAAGGGGTAAAAGAGGGAAAAGCTGTTGAAGAAAGGATGTAGGGATGTGGCAAATTTGATTACAAGCCATGGGGACCTT
CGGCAGGGGTTTATGCACGACTTTGGGGATGTTCTGTGGAGGTGTGGAGAATTTGGAGGTTGAGAAAGCGTTTGGGAGGGAGGCACTCTAGAATCAGTCCTTATTGTCTT
GTTTTGTAATTGCTCTGTTTTTCTTGTTTTAGAGATATGGTAATAAATATTATTGTCCTTTGGGTTGTTTTTTTTATTATTGAATATGAAAGATCAAGTAGATATCCAAC
TCCCTCTATTTTGGTCCATGTTGGATATTTTGGTGTGTGCAGGGTGGGATTAAGGATGCCTAACGAATTGGGGTATCAAAGTCATATCTTCCAGTTTTCATTTTTGGAAG
AATGAGAAAAAAAAAAGGCGTTGAAGAAATTGACGAGACGGAAGCTAGTTGGAATGAATCCCATGAGGAGATAAAAGGGGATGGAAGGAAATGGTGTTTGGATGTGCCAT
AACTTCAATCGGACACGCCTCCATCTCCCAAAAGATTTCCCAAGTTCCAAATTCTCTAGACCTCCATAGAACATCCAAAAACACTACCACATAAACCTCCACCAAAAATT
GTCGCTACTACGACGTGTAACCGAAATTGCCATATGTACCTGCAGCCCTTCTTCAACCGCTTTCTCCTTTTTACCCTTCTCTCATGTGTGCCAATGATTGGCTAAAGGTC
TTACACTAGACCTACAACAAAAATTAACTCTTAGGCCTTGTTTTGAGCTTAGAGAAGAGTGGAATGGAGTTTACTGAAATAATCCACCTATTTTTTGGGACTAAATTTAG
TTCTAGTTAGGGATTGTGATTAGGATTTTAGGATTTAAGATACCCACCTATCCTTACTATTCTTCAACCCTTAAGAAGTGTATTTGTTTTAAGGTTGAGTAGTTTGTCGA
TCAACTTTTGAAAATCACCGCCAACCAACCTCCAGTTGCCATTAATCAAC
Protein sequenceShow/hide protein sequence
MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDSLLLHGRRRSLRVACVCRRFSFRCAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTGENR
DFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDGKTPISPPPYVDPYALLEDERISQIAPPVN