; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0010591 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0010591
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:24252690..24254123
RNA-Seq ExpressionPay0010591
SyntenyPay0010591
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036942.1 uncharacterized protein E6C27_scaffold86G00180 [Cucumis melo var. makuwa]2.3e-23285.95Show/hide
Query:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI
        ME+KDKDMDKMRQEINNLGEQVSKILELLSMGKGK VVDTAQSSNPIQDTDDPIYPPGFTPYH+NVPQSQTTQHYVPTNPLYV              AKI
Subjt:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR
        QDM QNENTPAKQKLDVLEERLRAIE  DVYG IDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMA HINNDKLLVHCFQDS T PASR
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR

Query:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV
        WYIQLDNAHIH+WKDL DAFLKQYKHNIDMAP+RLDLQR+EKKSSESFKEYAQRWRDM  EVQPPL DKEMTSMFMNTL+APFYERMIGNASTNFSDIIV
Subjt:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAM--------SLISLIIAM----YQPI-TVSETPKLFNSNSPRPFVQG
        IGERIEYGIKHGRLA+A TEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIF          S IS +  +    Y P  TVSETPK  NSNSPRPFVQG
Subjt:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAM--------SLISLIIAM----YQPI-TVSETPKLFNSNSPRPFVQG

Query:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNVQS
        Q SKTNSDTWRFD IP+TYTELLPQLIQNRQLA IP+IPIQPPYPKWYDSN RCDYH GGVGHSTENCLALKRNVQS
Subjt:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNVQS

KAA0036957.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]2.0e-22885.12Show/hide
Query:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI
        ME+KDKDMDKMRQEINNLGEQVSKILELLSMGKGK VVDTAQSSNPIQDTDDPIYPPGFTPYH+NVPQSQTTQHYVPTNPLYV              AKI
Subjt:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR
        QDM QNENTPAKQKLDVLEERLRAIE  DVYG IDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMY RKMA HINNDKLLVHCFQDS T PASR
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR

Query:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV
        WYIQLDNAHIH+WKDL DAFLKQYKHNIDMAP+ LDLQRMEKKSSESFKEYAQRWRDMA EVQPPL DKEMTSMFMNTL+APFYERMIGNASTNFSDIIV
Subjt:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAM--------SLISLIIAM----YQPI-TVSETPKLFNSNSPRPFVQG
        IGERIEYGIKHGRLA+A TEYG IKKGTISKKKEGEVHAIGFPNSGKHKSIF          S IS +  +    Y P  TVSETPK  NSNSPRPFVQG
Subjt:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAM--------SLISLIIAM----YQPI-TVSETPKLFNSNSPRPFVQG

Query:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNVQS
        Q SKTNSDTWRFD IP+TYTE+LPQLIQNRQLA IP+IPIQPPY KWYDSN RCDYH GGVGHS ENCLALKRNVQS
Subjt:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNVQS

KAA0044913.1 uncharacterized protein E6C27_scaffold74G002080 [Cucumis melo var. makuwa]6.0e-22087.72Show/hide
Query:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI
        ME+KDKDMDKMRQEINNLGEQVSKILELLSMGKGKV VDTAQSSNPIQDTDD IYPPGFTPYHMNVPQSQTTQHYVPTNPLYV              AKI
Subjt:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR
        QDMGQNENTPAKQKLDVLEERLRAIEG DVYG IDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDS TGPASR
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR

Query:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV
        WYIQLDNAHIHIWKDL DAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDM VEVQPPLIDKEMTSMFMNTL+APFYERMIGNASTNFS+IIV
Subjt:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAM--------SLISLIIAM----YQPI-TVSETPKLFNSNSPRPFVQG
        IGERIEYGIKHGRLA+AKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIF          S IS +  +    Y P  TVSE PKLFNSNSPRPFVQG
Subjt:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAM--------SLISLIIAM----YQPI-TVSETPKLFNSNSPRPFVQG

Query:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWY
        Q SKTNSDTWRFD IP+TYTELLPQLIQNRQLAPIP+IPIQPPYPK +
Subjt:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWY

KAA0046903.1 Gag-pro-like protein [Cucumis melo var. makuwa]5.2e-21683.77Show/hide
Query:  MDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKIQDMGQNE
        M+KM QEINNLGEQVSKILELLS+ KGKVVVDT QSSNPIQDTDD IYPPGFTPYHMNV QSQTTQHYVPTN LYV              AKIQDMGQNE
Subjt:  MDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKIQDMGQNE

Query:  NTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASRWYIQLDN
        NTPAKQKLDVLEERLRAIEG DVYG ID TQLCLVP LIIPAKFKVP+FDKYDGSTCP SHLIMYCRKMA HINNDKLLVHCFQ+S TGPASRWYIQLDN
Subjt:  NTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASRWYIQLDN

Query:  AHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIVIGERIEY
        AHIH+WKDL DAFLKQYKHNIDMAP+RLDLQRMEKKSSESFKEYAQRWRDM VEVQPPL DKEMTSMFMNTL+APFYERMIGNASTNFSDIIVIGERIEY
Subjt:  AHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAMSLISLIIAMYQPI-TVSETPKLFNSNSPRPFVQGQSSKTNSDTWRFDSIPLTY
        GIKHGRLA+A TEYGGIKKGTISK KEGEVHAIGFPNS                  Y P  TVSETPK  NSNSPRPFVQGQ SKTNSDTWRFD I +TY
Subjt:  GIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAMSLISLIIAMYQPI-TVSETPKLFNSNSPRPFVQGQSSKTNSDTWRFDSIPLTY

Query:  TELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNV
        TELLPQLI+NRQLAPIP+IPIQP YPKWY+SN RCDYH GGVGHSTENCLALKR V
Subjt:  TELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNV

KAA0060421.1 uncharacterized protein E6C27_scaffold22G002400 [Cucumis melo var. makuwa]1.2e-23185.12Show/hide
Query:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI
        ME+KDKDMDKMRQEINN+GEQVSKILELLSMGKGKV VDT QSSNPIQDTDDPIYPP FTPYHMNVPQSQTTQHY+PT+PLYV              AKI
Subjt:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR
        QDMGQNENT AKQKLDVLEERLRAIEG DVYG IDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMA HINNDKLLVHCFQDS TGPASR
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR

Query:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV
        WYIQLDNAHIH+WKDL DAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRW+DM  EVQPPL DKEMTSMFMNTL+APFYERMIGNASTNFSDIIV
Subjt:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFA-----------MSLISLI-IAMYQPI-TVSETPKLFNSNSPRPFVQG
        IGERIEYGIKHGRLA+  TEYGGIKKGTISKKKEGE+HAIGFPNSGKHKSIF            +S +S I    Y P  TVSETPK  NSNSPRPFVQG
Subjt:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFA-----------MSLISLI-IAMYQPI-TVSETPKLFNSNSPRPFVQG

Query:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNVQS
        Q SK NSDTWRFD IP+TYTELLPQLIQNRQLAPIP+IPIQPPYPKWYDSN RCDYH GGVGHSTENC ALKRNVQS
Subjt:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNVQS

TrEMBL top hitse value%identityAlignment
A0A5A7T0H8 Uncharacterized protein1.1e-23285.95Show/hide
Query:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI
        ME+KDKDMDKMRQEINNLGEQVSKILELLSMGKGK VVDTAQSSNPIQDTDDPIYPPGFTPYH+NVPQSQTTQHYVPTNPLYV              AKI
Subjt:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR
        QDM QNENTPAKQKLDVLEERLRAIE  DVYG IDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMA HINNDKLLVHCFQDS T PASR
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR

Query:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV
        WYIQLDNAHIH+WKDL DAFLKQYKHNIDMAP+RLDLQR+EKKSSESFKEYAQRWRDM  EVQPPL DKEMTSMFMNTL+APFYERMIGNASTNFSDIIV
Subjt:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAM--------SLISLIIAM----YQPI-TVSETPKLFNSNSPRPFVQG
        IGERIEYGIKHGRLA+A TEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIF          S IS +  +    Y P  TVSETPK  NSNSPRPFVQG
Subjt:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAM--------SLISLIIAM----YQPI-TVSETPKLFNSNSPRPFVQG

Query:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNVQS
        Q SKTNSDTWRFD IP+TYTELLPQLIQNRQLA IP+IPIQPPYPKWYDSN RCDYH GGVGHSTENCLALKRNVQS
Subjt:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNVQS

A0A5A7T5W6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein9.9e-22985.12Show/hide
Query:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI
        ME+KDKDMDKMRQEINNLGEQVSKILELLSMGKGK VVDTAQSSNPIQDTDDPIYPPGFTPYH+NVPQSQTTQHYVPTNPLYV              AKI
Subjt:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR
        QDM QNENTPAKQKLDVLEERLRAIE  DVYG IDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMY RKMA HINNDKLLVHCFQDS T PASR
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR

Query:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV
        WYIQLDNAHIH+WKDL DAFLKQYKHNIDMAP+ LDLQRMEKKSSESFKEYAQRWRDMA EVQPPL DKEMTSMFMNTL+APFYERMIGNASTNFSDIIV
Subjt:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAM--------SLISLIIAM----YQPI-TVSETPKLFNSNSPRPFVQG
        IGERIEYGIKHGRLA+A TEYG IKKGTISKKKEGEVHAIGFPNSGKHKSIF          S IS +  +    Y P  TVSETPK  NSNSPRPFVQG
Subjt:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAM--------SLISLIIAM----YQPI-TVSETPKLFNSNSPRPFVQG

Query:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNVQS
        Q SKTNSDTWRFD IP+TYTE+LPQLIQNRQLA IP+IPIQPPY KWYDSN RCDYH GGVGHS ENCLALKRNVQS
Subjt:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNVQS

A0A5A7V3W7 Retrotrans_gag domain-containing protein5.6e-23285.12Show/hide
Query:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI
        ME+KDKDMDKMRQEINN+GEQVSKILELLSMGKGKV VDT QSSNPIQDTDDPIYPP FTPYHMNVPQSQTTQHY+PT+PLYV              AKI
Subjt:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR
        QDMGQNENT AKQKLDVLEERLRAIEG DVYG IDATQLCLVP LIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMA HINNDKLLVHCFQDS TGPASR
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR

Query:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV
        WYIQLDNAHIH+WKDL DAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRW+DM  EVQPPL DKEMTSMFMNTL+APFYERMIGNASTNFSDIIV
Subjt:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFA-----------MSLISLI-IAMYQPI-TVSETPKLFNSNSPRPFVQG
        IGERIEYGIKHGRLA+  TEYGGIKKGTISKKKEGE+HAIGFPNSGKHKSIF            +S +S I    Y P  TVSETPK  NSNSPRPFVQG
Subjt:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFA-----------MSLISLI-IAMYQPI-TVSETPKLFNSNSPRPFVQG

Query:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNVQS
        Q SK NSDTWRFD IP+TYTELLPQLIQNRQLAPIP+IPIQPPYPKWYDSN RCDYH GGVGHSTENC ALKRNVQS
Subjt:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNVQS

A0A5D3BVZ5 Gag-pro-like protein2.5e-21683.77Show/hide
Query:  MDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKIQDMGQNE
        M+KM QEINNLGEQVSKILELLS+ KGKVVVDT QSSNPIQDTDD IYPPGFTPYHMNV QSQTTQHYVPTN LYV              AKIQDMGQNE
Subjt:  MDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKIQDMGQNE

Query:  NTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASRWYIQLDN
        NTPAKQKLDVLEERLRAIEG DVYG ID TQLCLVP LIIPAKFKVP+FDKYDGSTCP SHLIMYCRKMA HINNDKLLVHCFQ+S TGPASRWYIQLDN
Subjt:  NTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASRWYIQLDN

Query:  AHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIVIGERIEY
        AHIH+WKDL DAFLKQYKHNIDMAP+RLDLQRMEKKSSESFKEYAQRWRDM VEVQPPL DKEMTSMFMNTL+APFYERMIGNASTNFSDIIVIGERIEY
Subjt:  AHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIVIGERIEY

Query:  GIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAMSLISLIIAMYQPI-TVSETPKLFNSNSPRPFVQGQSSKTNSDTWRFDSIPLTY
        GIKHGRLA+A TEYGGIKKGTISK KEGEVHAIGFPNS                  Y P  TVSETPK  NSNSPRPFVQGQ SKTNSDTWRFD I +TY
Subjt:  GIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAMSLISLIIAMYQPI-TVSETPKLFNSNSPRPFVQGQSSKTNSDTWRFDSIPLTY

Query:  TELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNV
        TELLPQLI+NRQLAPIP+IPIQP YPKWY+SN RCDYH GGVGHSTENCLALKR V
Subjt:  TELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTENCLALKRNV

A0A5D3CXD6 Retrotrans_gag domain-containing protein2.9e-22087.72Show/hide
Query:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI
        ME+KDKDMDKMRQEINNLGEQVSKILELLSMGKGKV VDTAQSSNPIQDTDD IYPPGFTPYHMNVPQSQTTQHYVPTNPLYV              AKI
Subjt:  MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYV--------------AKI

Query:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR
        QDMGQNENTPAKQKLDVLEERLRAIEG DVYG IDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDS TGPASR
Subjt:  QDMGQNENTPAKQKLDVLEERLRAIEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASR

Query:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV
        WYIQLDNAHIHIWKDL DAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDM VEVQPPLIDKEMTSMFMNTL+APFYERMIGNASTNFS+IIV
Subjt:  WYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNRLDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIV

Query:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAM--------SLISLIIAM----YQPI-TVSETPKLFNSNSPRPFVQG
        IGERIEYGIKHGRLA+AKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIF          S IS +  +    Y P  TVSE PKLFNSNSPRPFVQG
Subjt:  IGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPNSGKHKSIFAM--------SLISLIIAM----YQPI-TVSETPKLFNSNSPRPFVQG

Query:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWY
        Q SKTNSDTWRFD IP+TYTELLPQLIQNRQLAPIP+IPIQPPYPK +
Subjt:  QSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACAAAGATAAGGACATGGACAAAATGAGACAAGAGATTAATAATCTTGGGGAACAAGTTTCAAAAATACTAGAATTGCTTTCAATGGGGAAAGGAAAAGTCGT
TGTAGATACAGCACAATCAAGCAATCCAATTCAAGACACAGATGATCCCATTTATCCTCCAGGATTCACTCCATACCACATGAATGTTCCGCAGTCTCAAACCACTCAAC
ACTATGTTCCTACGAATCCGCTGTATGTTGCTAAAATTCAAGACATGGGACAAAACGAGAACACTCCGGCTAAGCAAAAGTTAGATGTTTTGGAAGAAAGGTTACGAGCA
ATTGAAGGAGCTGATGTCTATGGAAAGATAGATGCAACACAATTGTGCTTGGTGCCAGACTTGATCATTCCAGCAAAGTTTAAAGTTCCTGAATTCGATAAATATGATGG
ATCAACGTGTCCAAGGAGTCATCTTATAATGTACTGCAGAAAGATGGCGGCGCATATTAATAATGATAAATTGTTAGTCCATTGCTTCCAGGATAGCTGGACTGGTCCAG
CTAGTCGATGGTATATTCAATTAGATAATGCACACATTCACATTTGGAAGGACTTAACTGATGCATTTCTAAAGCAATACAAACACAACATTGATATGGCTCCAAACCGT
TTAGACTTGCAACGGATGGAGAAGAAGAGTTCAGAAAGCTTCAAAGAATATGCTCAACGATGGAGAGATATGGCTGTCGAGGTTCAACCACCGTTAATAGACAAAGAAAT
GACATCTATGTTTATGAATACCTTGCAGGCTCCATTCTATGAGCGAATGATTGGTAATGCATCAACAAATTTTTCTGATATTATTGTTATTGGCGAAAGAATTGAATATG
GGATAAAACACGGGAGGTTAGCAAAGGCTAAAACTGAATATGGTGGAATAAAGAAAGGAACAATATCCAAGAAGAAAGAAGGAGAGGTTCATGCAATTGGTTTTCCTAAT
TCAGGGAAGCACAAATCAATTTTTGCAATGTCTCTCATATCCCTTATAATAGCTATGTACCAACCCATTACCGTTTCTGAAACTCCAAAACTCTTTAACTCAAATTCTCC
TCGACCATTTGTACAGGGTCAAAGTAGCAAAACCAATTCAGATACATGGCGATTTGATTCGATTCCCTTGACTTATACAGAGCTTTTACCTCAACTAATTCAAAATCGAC
AGTTAGCTCCTATTCCAGTGATTCCTATACAACCTCCTTATCCAAAATGGTATGATTCAAATACTCGATGTGATTATCACACGGGAGGAGTGGGACACTCAACTGAAAAT
TGTTTGGCTTTGAAAAGAAATGTGCAATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACAAAGATAAGGACATGGACAAAATGAGACAAGAGATTAATAATCTTGGGGAACAAGTTTCAAAAATACTAGAATTGCTTTCAATGGGGAAAGGAAAAGTCGT
TGTAGATACAGCACAATCAAGCAATCCAATTCAAGACACAGATGATCCCATTTATCCTCCAGGATTCACTCCATACCACATGAATGTTCCGCAGTCTCAAACCACTCAAC
ACTATGTTCCTACGAATCCGCTGTATGTTGCTAAAATTCAAGACATGGGACAAAACGAGAACACTCCGGCTAAGCAAAAGTTAGATGTTTTGGAAGAAAGGTTACGAGCA
ATTGAAGGAGCTGATGTCTATGGAAAGATAGATGCAACACAATTGTGCTTGGTGCCAGACTTGATCATTCCAGCAAAGTTTAAAGTTCCTGAATTCGATAAATATGATGG
ATCAACGTGTCCAAGGAGTCATCTTATAATGTACTGCAGAAAGATGGCGGCGCATATTAATAATGATAAATTGTTAGTCCATTGCTTCCAGGATAGCTGGACTGGTCCAG
CTAGTCGATGGTATATTCAATTAGATAATGCACACATTCACATTTGGAAGGACTTAACTGATGCATTTCTAAAGCAATACAAACACAACATTGATATGGCTCCAAACCGT
TTAGACTTGCAACGGATGGAGAAGAAGAGTTCAGAAAGCTTCAAAGAATATGCTCAACGATGGAGAGATATGGCTGTCGAGGTTCAACCACCGTTAATAGACAAAGAAAT
GACATCTATGTTTATGAATACCTTGCAGGCTCCATTCTATGAGCGAATGATTGGTAATGCATCAACAAATTTTTCTGATATTATTGTTATTGGCGAAAGAATTGAATATG
GGATAAAACACGGGAGGTTAGCAAAGGCTAAAACTGAATATGGTGGAATAAAGAAAGGAACAATATCCAAGAAGAAAGAAGGAGAGGTTCATGCAATTGGTTTTCCTAAT
TCAGGGAAGCACAAATCAATTTTTGCAATGTCTCTCATATCCCTTATAATAGCTATGTACCAACCCATTACCGTTTCTGAAACTCCAAAACTCTTTAACTCAAATTCTCC
TCGACCATTTGTACAGGGTCAAAGTAGCAAAACCAATTCAGATACATGGCGATTTGATTCGATTCCCTTGACTTATACAGAGCTTTTACCTCAACTAATTCAAAATCGAC
AGTTAGCTCCTATTCCAGTGATTCCTATACAACCTCCTTATCCAAAATGGTATGATTCAAATACTCGATGTGATTATCACACGGGAGGAGTGGGACACTCAACTGAAAAT
TGTTTGGCTTTGAAAAGAAATGTGCAATCTTAA
Protein sequenceShow/hide protein sequence
MEDKDKDMDKMRQEINNLGEQVSKILELLSMGKGKVVVDTAQSSNPIQDTDDPIYPPGFTPYHMNVPQSQTTQHYVPTNPLYVAKIQDMGQNENTPAKQKLDVLEERLRA
IEGADVYGKIDATQLCLVPDLIIPAKFKVPEFDKYDGSTCPRSHLIMYCRKMAAHINNDKLLVHCFQDSWTGPASRWYIQLDNAHIHIWKDLTDAFLKQYKHNIDMAPNR
LDLQRMEKKSSESFKEYAQRWRDMAVEVQPPLIDKEMTSMFMNTLQAPFYERMIGNASTNFSDIIVIGERIEYGIKHGRLAKAKTEYGGIKKGTISKKKEGEVHAIGFPN
SGKHKSIFAMSLISLIIAMYQPITVSETPKLFNSNSPRPFVQGQSSKTNSDTWRFDSIPLTYTELLPQLIQNRQLAPIPVIPIQPPYPKWYDSNTRCDYHTGGVGHSTEN
CLALKRNVQS