; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0010594 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0010594
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionIntegrase
Genome locationchr04:12106456..12107343
RNA-Seq ExpressionPay0010594
SyntenyPay0010594
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003729 - mRNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051601.1 integrase [Cucumis melo var. makuwa]4.2e-9281.97Show/hide
Query:  MGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA----------------AAWDIL
        M SNGNMLQPQLPRFS KNFNQWSIQMKVLYGSQELWDI                     LRENRKKDKKALFFIYQA                AAWDIL
Subjt:  MGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA----------------AAWDIL

Query:  RSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLSTLSINSLMGSLQSHE
        RSTYQGEDKVKM RLQALRSEFD IKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPR FEHIVVAIEESKDLSTLSINSLMGSLQSHE
Subjt:  RSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLSTLSINSLMGSLQSHE

Query:  LRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR
        LRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR
Subjt:  LRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR

KAA0051603.1 integrase [Cucumis melo var. makuwa]2.6e-9481.25Show/hide
Query:  VSELRLDMGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA---------------
        ++ELRLDM SNGNMLQPQLPRFS KNFNQWSIQMKVLYGSQELWDI                     LRENRKKDKKALFFIYQA               
Subjt:  VSELRLDMGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA---------------

Query:  -AAWDILRSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLSTLSINSLM
         AAWDILRSTYQGEDKVKM RLQALRSEFD IKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPR FEHIVVAIEESKDLSTLSINSLM
Subjt:  -AAWDILRSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLSTLSINSLM

Query:  GSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR
        GSLQSHELRLKQFD NPEEAFQMQTSFRGGSRGRRGGHGR
Subjt:  GSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR

KAA0060690.1 integrase [Cucumis melo var. makuwa]7.2e-10082.66Show/hide
Query:  GLLRFQQVVSELRLDMGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA-------
        GLLRFQQVVSEL+LDM SNGNMLQPQLPRFS KNFNQWSIQMKVLYGSQELWDI                     LRENRKKDKKALFFIYQA       
Subjt:  GLLRFQQVVSELRLDMGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA-------

Query:  ---------AAWDILRSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLS
                 AAWDILRSTYQGEDKVKM RLQALRSEFD IKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPR FEHIVVAIEESKDLS
Subjt:  ---------AAWDILRSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLS

Query:  TLSINSLMGSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR
        TLSINSLMGSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR
Subjt:  TLSINSLMGSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR

TYK16225.1 integrase [Cucumis melo var. makuwa]1.5e-10080.93Show/hide
Query:  SSSLRNIIQGLLRFQQVVSELRLDMGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIY
        S S    +QGLLRFQQVVSELRLDM SNGNMLQPQLPRFS KNFNQWSIQMKVLYGSQELWDI                     LRENRKKDKKALFFIY
Subjt:  SSSLRNIIQGLLRFQQVVSELRLDMGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIY

Query:  QA----------------AAWDILRSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVV
        QA                AAWDILRSTYQGEDKVKM RLQALRSEFD IKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPR FEHIVV
Subjt:  QA----------------AAWDILRSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVV

Query:  AIEESKDLSTLSINSLMGSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR
        AIEESKDLSTLSINSLMGSLQSHELRLKQFD NPEEAFQMQTSFRGGSRGRRGGHGR
Subjt:  AIEESKDLSTLSINSLMGSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR

TYK30104.1 integrase [Cucumis melo var. makuwa]7.2e-9281.97Show/hide
Query:  MGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA----------------AAWDIL
        M SNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI                     LRENRKKDKKALFFIYQA                AAWDIL
Subjt:  MGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA----------------AAWDIL

Query:  RSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLSTLSINSLMGSLQSHE
        RSTYQGEDKVKM RLQALRSEFD IKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPR FEHIVVAIEESKDLSTLSINSLMGSLQSHE
Subjt:  RSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLSTLSINSLMGSLQSHE

Query:  LRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR
        LRLKQFD NPEEAFQMQTSFRGGSRGRRGGHGR
Subjt:  LRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR

TrEMBL top hitse value%identityAlignment
A0A5A7U6S3 Integrase1.3e-9481.25Show/hide
Query:  VSELRLDMGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA---------------
        ++ELRLDM SNGNMLQPQLPRFS KNFNQWSIQMKVLYGSQELWDI                     LRENRKKDKKALFFIYQA               
Subjt:  VSELRLDMGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA---------------

Query:  -AAWDILRSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLSTLSINSLM
         AAWDILRSTYQGEDKVKM RLQALRSEFD IKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPR FEHIVVAIEESKDLSTLSINSLM
Subjt:  -AAWDILRSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLSTLSINSLM

Query:  GSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR
        GSLQSHELRLKQFD NPEEAFQMQTSFRGGSRGRRGGHGR
Subjt:  GSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR

A0A5A7UDJ2 Integrase2.0e-9281.97Show/hide
Query:  MGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA----------------AAWDIL
        M SNGNMLQPQLPRFS KNFNQWSIQMKVLYGSQELWDI                     LRENRKKDKKALFFIYQA                AAWDIL
Subjt:  MGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA----------------AAWDIL

Query:  RSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLSTLSINSLMGSLQSHE
        RSTYQGEDKVKM RLQALRSEFD IKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPR FEHIVVAIEESKDLSTLSINSLMGSLQSHE
Subjt:  RSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLSTLSINSLMGSLQSHE

Query:  LRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR
        LRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR
Subjt:  LRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR

A0A5A7V047 Integrase3.5e-10082.66Show/hide
Query:  GLLRFQQVVSELRLDMGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA-------
        GLLRFQQVVSEL+LDM SNGNMLQPQLPRFS KNFNQWSIQMKVLYGSQELWDI                     LRENRKKDKKALFFIYQA       
Subjt:  GLLRFQQVVSELRLDMGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA-------

Query:  ---------AAWDILRSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLS
                 AAWDILRSTYQGEDKVKM RLQALRSEFD IKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPR FEHIVVAIEESKDLS
Subjt:  ---------AAWDILRSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLS

Query:  TLSINSLMGSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR
        TLSINSLMGSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR
Subjt:  TLSINSLMGSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR

A0A5D3CXM6 Integrase7.0e-10180.93Show/hide
Query:  SSSLRNIIQGLLRFQQVVSELRLDMGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIY
        S S    +QGLLRFQQVVSELRLDM SNGNMLQPQLPRFS KNFNQWSIQMKVLYGSQELWDI                     LRENRKKDKKALFFIY
Subjt:  SSSLRNIIQGLLRFQQVVSELRLDMGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIY

Query:  QA----------------AAWDILRSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVV
        QA                AAWDILRSTYQGEDKVKM RLQALRSEFD IKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPR FEHIVV
Subjt:  QA----------------AAWDILRSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVV

Query:  AIEESKDLSTLSINSLMGSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR
        AIEESKDLSTLSINSLMGSLQSHELRLKQFD NPEEAFQMQTSFRGGSRGRRGGHGR
Subjt:  AIEESKDLSTLSINSLMGSLQSHELRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR

A0A5D3E2J1 Integrase3.5e-9281.97Show/hide
Query:  MGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA----------------AAWDIL
        M SNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI                     LRENRKKDKKALFFIYQA                AAWDIL
Subjt:  MGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQA----------------AAWDIL

Query:  RSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLSTLSINSLMGSLQSHE
        RSTYQGEDKVKM RLQALRSEFD IKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPR FEHIVVAIEESKDLSTLSINSLMGSLQSHE
Subjt:  RSTYQGEDKVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLSTLSINSLMGSLQSHE

Query:  LRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR
        LRLKQFD NPEEAFQMQTSFRGGSRGRRGGHGR
Subjt:  LRLKQFDDNPEEAFQMQTSFRGGSRGRRGGHGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48720.1 unknown protein3.2e-0532.84Show/hide
Query:  QLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQ
        Q+P  ++ N++ WS++MK + G+ ++W+I                     LR++RK+DKKAL  IYQ
Subjt:  QLPRFSRKNFNQWSIQMKVLYGSQELWDI---------------------LRENRKKDKKALFFIYQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGTAAGGTTTCTCATTTGTAAAATAAGAAAGAAAGTAAGAAGTTCAAGTTTAAGAAATATTATTCAAGGTCTATTACGTTTCCAACAAGTGGTATCAGAGCTCCG
GTTAGATATGGGTTCAAATGGTAACATGTTGCAGCCCCAACTTCCAAGGTTCAGCAGAAAGAATTTTAATCAATGGAGTATTCAAATGAAAGTGTTATATGGCTCTCAAG
AATTGTGGGATATTTTAAGAGAAAATCGTAAGAAAGACAAAAAGGCTTTATTCTTCATTTATCAAGCTGCGGCTTGGGATATTCTAAGATCTACCTATCAAGGAGAAGAT
AAGGTAAAGATGAGAAGGTTACAAGCTCTCAGATCCGAATTTGATTTCATTAAAATGAAAGAAACTGAAACTATTGAAGAATTTTTCAATCGTATTCTTGTAATTGTCAA
TAGTTTAAGATCAAATGGTGAAGAAGTGGGCGATCAAAGAGTTGTTGAAAAGATTCTTAGAAGTATGCCAAGAAATTTTGAGCATATCGTCGTTGCAATTGAAGAATCGA
AAGACTTGTCTACGTTGTCTATAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTAAGATTAAAACAATTTGATGATAACCCCGAGGAAGCTTTTCAAATGCAAACT
TCATTTAGAGGCGGTTCACGTGGAAGACGTGGTGGTCATGGAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGTAAGGTTTCTCATTTGTAAAATAAGAAAGAAAGTAAGAAGTTCAAGTTTAAGAAATATTATTCAAGGTCTATTACGTTTCCAACAAGTGGTATCAGAGCTCCG
GTTAGATATGGGTTCAAATGGTAACATGTTGCAGCCCCAACTTCCAAGGTTCAGCAGAAAGAATTTTAATCAATGGAGTATTCAAATGAAAGTGTTATATGGCTCTCAAG
AATTGTGGGATATTTTAAGAGAAAATCGTAAGAAAGACAAAAAGGCTTTATTCTTCATTTATCAAGCTGCGGCTTGGGATATTCTAAGATCTACCTATCAAGGAGAAGAT
AAGGTAAAGATGAGAAGGTTACAAGCTCTCAGATCCGAATTTGATTTCATTAAAATGAAAGAAACTGAAACTATTGAAGAATTTTTCAATCGTATTCTTGTAATTGTCAA
TAGTTTAAGATCAAATGGTGAAGAAGTGGGCGATCAAAGAGTTGTTGAAAAGATTCTTAGAAGTATGCCAAGAAATTTTGAGCATATCGTCGTTGCAATTGAAGAATCGA
AAGACTTGTCTACGTTGTCTATAAATAGCTTGATGGGTTCTCTTCAATCCCATGAGCTAAGATTAAAACAATTTGATGATAACCCCGAGGAAGCTTTTCAAATGCAAACT
TCATTTAGAGGCGGTTCACGTGGAAGACGTGGTGGTCATGGAAGATGA
Protein sequenceShow/hide protein sequence
MCVRFLICKIRKKVRSSSLRNIIQGLLRFQQVVSELRLDMGSNGNMLQPQLPRFSRKNFNQWSIQMKVLYGSQELWDILRENRKKDKKALFFIYQAAAWDILRSTYQGED
KVKMRRLQALRSEFDFIKMKETETIEEFFNRILVIVNSLRSNGEEVGDQRVVEKILRSMPRNFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDDNPEEAFQMQT
SFRGGSRGRRGGHGR