| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0048442.1 pol protein [Cucumis melo var. makuwa] | 1.1e-219 | 54.36 | Show/hide |
Query: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
MLQAALAPFLAAQQNQAAPVQAQ V P AP EAQPVP QLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA
Subjt: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
Query: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
TAERMLGGDV+KITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAE DMLSRFAPD++RDEAARTEKFVRGLRLDLQGIVRALRP
Subjt: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
Query: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
THADALRIALDLSL ER DSSKAA RG+ALGQKRKVETQPDV QRTLRS GVFQRHRRELAAAGRTLRELPACTTCGR
Subjt: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
Query: -----------------------GRVFATTRQEAERAGTVVT----------------------------------------------------------
GRVFATTRQEAERAGTVVT
Subjt: -----------------------GRVFATTRQEAERAGTVVT----------------------------------------------------------
Query: -----DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ-----------------------VVREYPDVFPNELPGLPPPREVDFAIELER
DCFGKEVVFNPPS ASFKFRGAGMVCIPKVIS MKASKLLSQ VVREYPDVFP+ELPGLP PREVDFAIELE
Subjt: -----DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ-----------------------VVREYPDVFPNELPGLPPPREVDFAIELER
Query: DTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF------------------------------------------------------
TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLF
Subjt: DTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------------------------LKQKLVTAPVLTVPDGSGSF
LKQKLVTAPVLTVPDGSG+F
Subjt: --------------------------------------------------------------------------------LKQKLVTAPVLTVPDGSGSF
Query: VIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
VIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMR
Subjt: VIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
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| KAA0053574.1 pol protein [Cucumis melo var. makuwa] | 3.4e-224 | 59.07 | Show/hide |
Query: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
MLQAALAPFLAAQQNQAA VQAQTV+P AP +QPVP QLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA
Subjt: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
Query: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
TAERMLGGDVSKITWEQFK+NFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAE DMLSRFAPDVVRDEAARTEKF+R LRLDLQGIVRALRP
Subjt: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
Query: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
THADALRIALDLSL+ER DSSKA RG ALGQKRKVETQPDVI QRTLRS GVFQRHRRELAAAGRTLR LPACTTCGR
Subjt: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
Query: -----------------------GRVFATTRQEAERAGTVVT------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ----
G FATTRQEAERAGTVVT DCFGKEVVFN PSG SFKFRGAG+VC+PKVIS MKASKLLSQ
Subjt: -----------------------GRVFATTRQEAERAGTVVT------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ----
Query: -------------------VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-----
VVREYPDVFPNEL GLPPPRE+DFAIELE TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLF
Subjt: -------------------VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-----
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------------------------------------------------------------------------------------LKQKLVTAP
LKQKLVTAP
Subjt: -------------------------------------------------------------------------------------------LKQKLVTAP
Query: VLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
VLTVPDGSGSF IYSDASKKGLGCV+MQQGKVVAYA RQLK+HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFT+KELNMR
Subjt: VLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
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| KAA0066365.1 pol protein [Cucumis melo var. makuwa] | 4.7e-221 | 53.9 | Show/hide |
Query: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
MLQAALAPFLAAQQNQAAPVQAQ V P AP EAQPVP QLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA
Subjt: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
Query: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAE DMLSRFAPD+VRDEAARTEKFVRGLRLDLQGIVRALRP
Subjt: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
Query: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
THADALRIALDLSL ER DSSKAA RG+ALGQKRKVETQPDV QRTLRS GVFQRHRRELAAAG+TLRELPACTTCGR
Subjt: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
Query: -----------------------GRVFATTRQEAERAGTVVT----------------------------------------------------------
GRVFATTRQEAERAGTVVT
Subjt: -----------------------GRVFATTRQEAERAGTVVT----------------------------------------------------------
Query: ----------------------------------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ------------------
DCFGKEVVFNPPSGASFKFRGAGMVCIPKVIS MKASKLLSQ
Subjt: ----------------------------------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ------------------
Query: -----VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-------------------
VVREYPDVFP+ELPGLPPPREVDFAIELE DTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLF
Subjt: -----VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------------------------------------------------------------------LKQKL
LKQKL
Subjt: -----------------------------------------------------------------------------------------------LKQKL
Query: VTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
VTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMR
Subjt: VTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
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| KAA0067484.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.0e-220 | 54.67 | Show/hide |
Query: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
MLQAALAPFLAAQQNQAAPVQAQ V P AP EAQPVP QLSAEAKHLRDFRKYN KTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA
Subjt: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
Query: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAE DMLSRFAPD+VRDE+ARTEKFVRGLRLDLQGIVRALRP
Subjt: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
Query: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
THADALRIALDLSL ER DSSKAA RG+ALGQKRKVETQPDV+ QRTLRS GVFQRHRRELAAAGRTLRELPACTTCGR
Subjt: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
Query: -----------------------GRVFATTRQEAERAGTVVT----------------------------------------------------------
GRVFATTRQEAERAGTVVT
Subjt: -----------------------GRVFATTRQEAERAGTVVT----------------------------------------------------------
Query: ----------------------------------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ------------------
DCFGKEVVFNPPSGASFKFRGAGMVCIPK IS MKASKLLSQ
Subjt: ----------------------------------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ------------------
Query: -----VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-------------------
VVREYPDVFP+ELPGLPPPREVDFAIELE TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLF
Subjt: -----VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------LKQKLVTAPVLTVPDGSGSFVIYSD
LKQKLVTAPVLTVPDGSG+FVIYSD
Subjt: ---------------------------------------------------------------------------LKQKLVTAPVLTVPDGSGSFVIYSD
Query: ASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
ASKKGLGCVLMQQGKVVAYASRQLK HEQNYP HDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMR
Subjt: ASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
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| TYK19164.1 pol protein [Cucumis melo var. makuwa] | 3.4e-224 | 59.07 | Show/hide |
Query: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
MLQAALAPFLAAQQNQAA VQAQTV+P AP +QPVP QLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA
Subjt: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
Query: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
TAERMLGGDVSKITWEQFK+NFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAE DMLSRFAPDVVRDEAARTEKF+R LRLDLQGIVRALRP
Subjt: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
Query: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
THADALRIALDLSL+ER DSSKA RG ALGQKRKVETQPDVI QRTLRS GVFQRHRRELAAAGRTLR LPACTTCGR
Subjt: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
Query: -----------------------GRVFATTRQEAERAGTVVT------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ----
G FATTRQEAERAGTVVT DCFGKEVVFN PSG SFKFRGAG+VC+PKVIS MKASKLLSQ
Subjt: -----------------------GRVFATTRQEAERAGTVVT------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ----
Query: -------------------VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-----
VVREYPDVFPNEL GLPPPRE+DFAIELE TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLF
Subjt: -------------------VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-----
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------------------------------------------------------------------------------------LKQKLVTAP
LKQKLVTAP
Subjt: -------------------------------------------------------------------------------------------LKQKLVTAP
Query: VLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
VLTVPDGSGSF IYSDASKKGLGCV+MQQGKVVAYA RQLK+HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFT+KELNMR
Subjt: VLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TY28 Reverse transcriptase | 5.6e-220 | 54.36 | Show/hide |
Query: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
MLQAALAPFLAAQQNQAAPVQAQ V P AP EAQPVP QLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA
Subjt: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
Query: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
TAERMLGGDV+KITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAE DMLSRFAPD++RDEAARTEKFVRGLRLDLQGIVRALRP
Subjt: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
Query: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
THADALRIALDLSL ER DSSKAA RG+ALGQKRKVETQPDV QRTLRS GVFQRHRRELAAAGRTLRELPACTTCGR
Subjt: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
Query: -----------------------GRVFATTRQEAERAGTVVT----------------------------------------------------------
GRVFATTRQEAERAGTVVT
Subjt: -----------------------GRVFATTRQEAERAGTVVT----------------------------------------------------------
Query: -----DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ-----------------------VVREYPDVFPNELPGLPPPREVDFAIELER
DCFGKEVVFNPPS ASFKFRGAGMVCIPKVIS MKASKLLSQ VVREYPDVFP+ELPGLP PREVDFAIELE
Subjt: -----DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ-----------------------VVREYPDVFPNELPGLPPPREVDFAIELER
Query: DTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF------------------------------------------------------
TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLF
Subjt: DTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------------------------LKQKLVTAPVLTVPDGSGSF
LKQKLVTAPVLTVPDGSG+F
Subjt: --------------------------------------------------------------------------------LKQKLVTAPVLTVPDGSGSF
Query: VIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
VIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMR
Subjt: VIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
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| A0A5A7UED4 Pol protein | 1.7e-224 | 59.07 | Show/hide |
Query: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
MLQAALAPFLAAQQNQAA VQAQTV+P AP +QPVP QLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA
Subjt: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
Query: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
TAERMLGGDVSKITWEQFK+NFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAE DMLSRFAPDVVRDEAARTEKF+R LRLDLQGIVRALRP
Subjt: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
Query: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
THADALRIALDLSL+ER DSSKA RG ALGQKRKVETQPDVI QRTLRS GVFQRHRRELAAAGRTLR LPACTTCGR
Subjt: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
Query: -----------------------GRVFATTRQEAERAGTVVT------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ----
G FATTRQEAERAGTVVT DCFGKEVVFN PSG SFKFRGAG+VC+PKVIS MKASKLLSQ
Subjt: -----------------------GRVFATTRQEAERAGTVVT------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ----
Query: -------------------VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-----
VVREYPDVFPNEL GLPPPRE+DFAIELE TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLF
Subjt: -------------------VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-----
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------------------------------------------------------------------------------------LKQKLVTAP
LKQKLVTAP
Subjt: -------------------------------------------------------------------------------------------LKQKLVTAP
Query: VLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
VLTVPDGSGSF IYSDASKKGLGCV+MQQGKVVAYA RQLK+HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFT+KELNMR
Subjt: VLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
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| A0A5A7VJF1 Reverse transcriptase | 5.0e-221 | 54.67 | Show/hide |
Query: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
MLQAALAPFLAAQQNQAAPVQAQ V P AP EAQPVP QLSAEAKHLRDFRKYN KTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA
Subjt: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
Query: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAE DMLSRFAPD+VRDE+ARTEKFVRGLRLDLQGIVRALRP
Subjt: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
Query: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
THADALRIALDLSL ER DSSKAA RG+ALGQKRKVETQPDV+ QRTLRS GVFQRHRRELAAAGRTLRELPACTTCGR
Subjt: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
Query: -----------------------GRVFATTRQEAERAGTVVT----------------------------------------------------------
GRVFATTRQEAERAGTVVT
Subjt: -----------------------GRVFATTRQEAERAGTVVT----------------------------------------------------------
Query: ----------------------------------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ------------------
DCFGKEVVFNPPSGASFKFRGAGMVCIPK IS MKASKLLSQ
Subjt: ----------------------------------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ------------------
Query: -----VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-------------------
VVREYPDVFP+ELPGLPPPREVDFAIELE TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLF
Subjt: -----VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------LKQKLVTAPVLTVPDGSGSFVIYSD
LKQKLVTAPVLTVPDGSG+FVIYSD
Subjt: ---------------------------------------------------------------------------LKQKLVTAPVLTVPDGSGSFVIYSD
Query: ASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
ASKKGLGCVLMQQGKVVAYASRQLK HEQNYP HDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMR
Subjt: ASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
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| A0A5A7VKS7 Reverse transcriptase | 2.3e-221 | 53.9 | Show/hide |
Query: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
MLQAALAPFLAAQQNQAAPVQAQ V P AP EAQPVP QLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA
Subjt: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
Query: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAE DMLSRFAPD+VRDEAARTEKFVRGLRLDLQGIVRALRP
Subjt: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
Query: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
THADALRIALDLSL ER DSSKAA RG+ALGQKRKVETQPDV QRTLRS GVFQRHRRELAAAG+TLRELPACTTCGR
Subjt: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
Query: -----------------------GRVFATTRQEAERAGTVVT----------------------------------------------------------
GRVFATTRQEAERAGTVVT
Subjt: -----------------------GRVFATTRQEAERAGTVVT----------------------------------------------------------
Query: ----------------------------------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ------------------
DCFGKEVVFNPPSGASFKFRGAGMVCIPKVIS MKASKLLSQ
Subjt: ----------------------------------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ------------------
Query: -----VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-------------------
VVREYPDVFP+ELPGLPPPREVDFAIELE DTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLF
Subjt: -----VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------------------------------------------------------------------LKQKL
LKQKL
Subjt: -----------------------------------------------------------------------------------------------LKQKL
Query: VTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
VTAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFTQKELNMR
Subjt: VTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
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| A0A5D3D6H0 Pol protein | 1.7e-224 | 59.07 | Show/hide |
Query: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
MLQAALAPFLAAQQNQAA VQAQTV+P AP +QPVP QLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA
Subjt: MLQAALAPFLAAQQNQAAPVQAQTVVPLAPAEAQPVPFQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCA-------
Query: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
TAERMLGGDVSKITWEQFK+NFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAE DMLSRFAPDVVRDEAARTEKF+R LRLDLQGIVRALRP
Subjt: ------TAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQEFLNLEQGDMTVEQYDAELDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRP
Query: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
THADALRIALDLSL+ER DSSKA RG ALGQKRKVETQPDVI QRTLRS GVFQRHRRELAAAGRTLR LPACTTCGR
Subjt: GTHADALRIALDLSLHERVDSSKAASRGTALGQKRKVETQPDVISQRTLRSEGVFQRHRRELAAAGRTLRELPACTTCGR--------------------
Query: -----------------------GRVFATTRQEAERAGTVVT------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ----
G FATTRQEAERAGTVVT DCFGKEVVFN PSG SFKFRGAG+VC+PKVIS MKASKLLSQ
Subjt: -----------------------GRVFATTRQEAERAGTVVT------------DCFGKEVVFNPPSGASFKFRGAGMVCIPKVISTMKASKLLSQ----
Query: -------------------VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-----
VVREYPDVFPNEL GLPPPRE+DFAIELE TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLF
Subjt: -------------------VVREYPDVFPNELPGLPPPREVDFAIELERDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLF-----
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------------------------------------------------------------------------------------LKQKLVTAP
LKQKLVTAP
Subjt: -------------------------------------------------------------------------------------------LKQKLVTAP
Query: VLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
VLTVPDGSGSF IYSDASKKGLGCV+MQQGKVVAYA RQLK+HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTD KSLKYFFT+KELNMR
Subjt: VLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKELNMR
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 9.4e-15 | 40.78 | Show/hide |
Query: LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKEL
LK + P+L VPD + F + +DAS LG VL Q G ++Y SR L HE NY T + EL A+V+A K +RHYL G +I +D + L + + K+
Subjt: LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKEL
Query: NMR
N +
Subjt: NMR
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| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 1.8e-10 | 39.22 | Show/hide |
Query: LFLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK----VVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYF
+ LK +L+ +L PD S F I +DASK+ G VL Q VAYASR E N T + ELAA+ +A+ +R Y+YG+ + TD + L Y
Subjt: LFLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK----VVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYF
Query: FT
F+
Subjt: FT
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 2.8e-11 | 38.95 | Show/hide |
Query: VLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEK-IQIYTDPKSLKYFFTQKELNMR
+L PD F + +DAS G+G VL Q+G+ + SR LK EQNY T++ EL A+V+AL +++LYG + I I+TD + L + + N +
Subjt: VLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEK-IQIYTDPKSLKYFFTQKELNMR
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 3.6e-14 | 40.4 | Show/hide |
Query: LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKE
LK ++ P+L +PD FV+ +DAS LG VL Q G +++ SR L +HE NY + EL A+V+A K +RHYL G + I +D + L++ KE
Subjt: LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDPKSLKYFFTQKE
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 2.9e-08 | 33.33 | Show/hide |
Query: LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIYTDPKSLKYFF
LK L ++ +L P + F + +DAS +G VL Q + + +AY SR L E+NY T + E+ A++++L R YLYG I++YTD + L +
Subjt: LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIYTDPKSLKYFF
Query: TQKELNMR
+ N +
Subjt: TQKELNMR
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