CuGenDBv2

Gene ID	Pay0010717
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	CCHC-type domain-containing protein
Genome location	chr07:11912948..11915882
RNA-Seq Expression	Pay0010717
Synteny	Pay0010717
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

WP_217833168.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]

1.3e-62

71.74

Show/hide

Query:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------
        M+NL K+EF ALDING+NYLSWVLDAEIHLDAMNLGETIKEGN TS QEKAKAMIFLRHHLHE LK+EYLTIKD   LW++LK+RY+HQK          
Subjt:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------

Query:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQTFLSLLK
               +FK VSDYNSALFKI SKLLLCGEK+TD  MLE TFSTFH SNML+QQQYRE+GFK+Y ELISCLLV  Q    L+K
Subjt:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQTFLSLLK

XP_022144017.1 uncharacterized protein LOC111013806 [Momordica charantia]

1.1e-66

Show/hide

Query:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------
        M+NLTKLEF+ALDING+NYLSWVLDAEIHLDAMNLGETIKE NTT+SQE AKAMIFLRHHLHEGLK+EYLTIKD   LWQ+LKERY+HQK          
Subjt:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------

Query:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQTFLSLLK
               +FK VSDYNSALFKI SKL LCGEK+TD DMLEKT+STFHVSN+LLQQQYRE+GFKKY ELISCLLV  Q    L+K
Subjt:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQTFLSLLK

XP_028787995.1 uncharacterized protein LOC114743980 [Prosopis alba]

1.3e-62

71.75

Show/hide

Query:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------
        MSNLTKLEF+ALDI G NYLSW+LDAEIHL+A  LG+TIKEGN  S+Q+KAKAMIFLRHHLHEGLKIEYLTIKDP  LW +LKERY+HQK          
Subjt:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------

Query:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQ
               +FK V +YNSA+F+I S+L LCGEK+TDEDMLEKTFSTFH SN+LLQQQYRE+GFKKY ELISCLLV  Q
Subjt:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQ

XP_028801898.1 uncharacterized protein LOC114757071 [Prosopis alba]

1.3e-62

71.74

Show/hide

Query:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------
        MSNLTKLEF+ALDI G NYLSWVLDAEIHL+A  LG+TIK  N  SSQEKAKAMIFLRHHLHEGLK+EYLTIKDP  LW +LKERY+HQK          
Subjt:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------

Query:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQTFLSLLK
               +FK VS+YNSA+F+I S+L LCGEKVTDEDMLEKTFSTFHVSN+LLQQQYRE+GFKKY ELISCLLV  Q    L+K
Subjt:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQTFLSLLK

XP_042410080.1 uncharacterized protein LOC121999463 [Zingiber officinale]

7.7e-63

69.57

Show/hide

Query:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------
        MSNL+KLEF+ALDI+G NYLSW+LDAEIHLDAM LG+TIK+GN  S Q +AKAMIF+RHHLHE LKIEYLTIKDP ELW +LKERYNH K          
Subjt:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------

Query:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQTFLSLLK
               +FK VS+YNSA+F+I SKL LCGEK+TDEDMLEKT+STFH SNMLLQQQYRE+GFKKY ELI+CLLV  Q    L+K
Subjt:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQTFLSLLK

TrEMBL top hits

e value

%identity

Alignment

A0A286QJ35 Gag

7.0e-62

69.49

Show/hide

Query:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------
        MSN+TKLEF+ALDI+G NYLSW+LDAE+HLDAMNLG TIK+GN  S Q++AKA+IFLRHHLHEGLK EYLT+KDP+ LW +LKERY+HQK          
Subjt:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------

Query:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQ
               +FK VS+YNSALFKI S+L LCGEK+T+EDMLEKTF+TFH SN+LLQQQYRER F KY ELISCLLV  Q
Subjt:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQ

A0A438ID00 Retrovirus-related Pol polyprotein from transposon TNT 1-94

7.0e-62

69.49

Show/hide

Query:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------
        MSN+TKLEF+ALDI+G NYLSW+LDAE+HLDAMNLG TIK+GN  S Q++AKA+IFLRHHLHEGLK EYLT+KDP+ LW +LKERY+HQK          
Subjt:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------

Query:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQ
               +FK VS+YNSALFKI S+L LCGEK+T+EDMLEKTF+TFH SN+LLQQQYRER F KY ELISCLLV  Q
Subjt:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQ

A0A6J1CSH6 uncharacterized protein LOC111013806

5.5e-67

Show/hide

Query:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------
        M+NLTKLEF+ALDING+NYLSWVLDAEIHLDAMNLGETIKE NTT+SQE AKAMIFLRHHLHEGLK+EYLTIKD   LWQ+LKERY+HQK          
Subjt:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------

Query:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQTFLSLLK
               +FK VSDYNSALFKI SKL LCGEK+TD DMLEKT+STFHVSN+LLQQQYRE+GFKKY ELISCLLV  Q    L+K
Subjt:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQTFLSLLK

A5AJ43 Uncharacterized protein

2.0e-61

68.93

Show/hide

Query:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------
        MSN+TKLEF+ALDI+G NYLSW+LDAE+HLDAMNLG TIK+GN  S Q++AKA+IFLRHHLHEGLK EY T+KDP+ LW +LKERY+HQK          
Subjt:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------

Query:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQ
               +FK VS+YNSALFKI S+L LCGEK+T+EDMLEKTF+TFH SN+LLQQQYRER F KY ELISCLLV  Q
Subjt:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQ

A5B4M9 Uncharacterized protein

7.0e-62

69.49

Show/hide

Query:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------
        MSN+TKLEF+ALDI+G NYLSW+LDAE+HLDAMNLG TIK+GN  S Q++AKA+IFLRHHLHEGLK EYLT+KDP+ LW +LKERY+HQK          
Subjt:  MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQK----------

Query:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQ
               +FK VS+YNSALFKI S+L LCGEK+T+EDMLEKTF+TFH SN+LLQQQYRER F KY ELISCLLV  Q
Subjt:  -------NFKLVSDYNSALFKICSKLLLCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCAAATCTTACCAAATTAGAATTTCTAGCTCTTGATATCAATGGTGATAATTATTTATCATGGGTGCTTGATGCTGAAATTCATTTGGATGCCATGAATCTTGGAGA
AACGATTAAAGAAGGAAACACGACTTCAAGTCAAGAAAAGGCGAAAGCCATGATTTTCCTTCGACATCATCTTCATGAGGGACTAAAGATTGAATATCTTACGATAAAAG
ATCCCTATGAACTATGGCAAAGTTTAAAAGAAAGGTATAATCATCAAAAAAATTTTAAATTAGTAAGTGATTATAATTCCGCATTATTTAAAATTTGTTCAAAATTATTA
TTATGCGGAGAAAAAGTTACTGATGAAGATATGTTAGAGAAAACCTTTTCAACATTTCATGTCTCGAATATGCTCCTGCAGCAGCAATATCGAGAAAGAGGTTTTAAAAA
GTATTTCGAACTCATATCATGTCTTCTTGTGATGTGGCAGACTTTTTTGAGTCTTCTAAAGAGAAAAATGATGTTAATGAAACTTATTGAGTTTCAAAGATATACGTCAA
AATGGAAACATATTCTCCTGTGGTGGATGCTATTACATTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSNLTKLEFLALDINGDNYLSWVLDAEIHLDAMNLGETIKEGNTTSSQEKAKAMIFLRHHLHEGLKIEYLTIKDPYELWQSLKERYNHQKNFKLVSDYNSALFKICSKLL
LCGEKVTDEDMLEKTFSTFHVSNMLLQQQYRERGFKKYFELISCLLVMWQTFLSLLKRKMMLMKLIEFQRYTSKWKHILLWWMLLH

Pay0010717 (gene) of Melon (Payzawat) v1 genome