| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 5.9e-228 | 57.83 | Show/hide |
Query: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKP--------------------------TTPMKNIDNTANTSDLDAFDTAKEL
M+KN+VAR ISTILDGTNYITWAH MRSFLIGRKLWRIV GDITKP+KP T + N A + DAFD+AKEL
Subjt: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKP--------------------------TTPMKNIDNTANTSDLDAFDTAKEL
Query: WDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPLPSLDAAVQEILFEEKR
WDFL TRFQSIGLAHYYQL+STL++LNQE+GQSVNEYLATLQPIWTQLDQAKI+PDHIRLIKVLMGLRPEYE VRAALLHR+PLPSLDAAVQEILFEEKR
Subjt: WDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPLPSLDAAVQEILFEEKR
Query: LGIVSALPSDP--NGTNI-VTNEVTFWIIVQL-------------------VHLV----------------PLVTHRNPSSP------------------
LGIVS+L SD T++ NE F +L H++ P +H+ SS
Subjt: LGIVSALPSDP--NGTNI-VTNEVTFWIIVQL-------------------VHLV----------------PLVTHRNPSSP------------------
Query: -----LKLVISSNSTALAVTPGTSWLLDSTYCNHMTSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLC-LG
LK VISS STALAVTPGTSWLLDS CNHMTS ISLLSSHIPV SLPPIHS DGN MSISHIGTVNTPTIKLSNTYHVPNLT+NLASVGQLC LG
Subjt: -----LKLVISSNSTALAVTPGTSWLLDSTYCNHMTSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLC-LG
Query: L------------------------------------------------SDGTI-DWYGTEGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLAL
L +D T+ W+ GHASS+KLRSL S G LNNVS+F+T D L+CK+AKQ AL
Subjt: L------------------------------------------------SDGTI-DWYGTEGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLAL
Query: SFPNSASLCDKPFGLIHSDIWGPAPCAT------------------------------------------------------------------------
SFP SASLCDKPFGLIHSDIWGPAPC T
Subjt: SFPNSASLCDKPFGLIHSDIWGPAPCAT------------------------------------------------------------------------
Query: ------------QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLE
QNGRAERKHRHILDSVRAQLLS SCP+ FWGEAALTS VIHNISPFERL+GTPP+YS+LK+FGCACFVLLH HEHTKLE
Subjt: ------------QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLE
Query: PRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSHTTSTLPDLPS
PRARLCCFLGYGT+HKGFRCWDPISQRLRISRHVTFWEH MFSSLSSFHASLSS SFFTDPST LFPTPDSP NT PPL+SELT SHTTS LP+LPS
Subjt: PRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSHTTSTLPDLPS
Query: ISSEESEPTPV
+ EE E PV
Subjt: ISSEESEPTPV
|
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| KAA0037189.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.7e-257 | 71.66 | Show/hide |
Query: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKPTTPMKNIDNTANTSD------------------------------------
MQKNNVARLISTILD GDITKP+KPTTPMKNIDNTANTSD
Subjt: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKPTTPMKNIDNTANTSD------------------------------------
Query: ------LDAFDTAKELWDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPL
LD+FDTAKELWDFL+TRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQ KINPDHIRLIKVLMGLRPEYESVRAALLHR+PL
Subjt: ------LDAFDTAKELWDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPL
Query: PSLDAAVQEILFEEKRLGIVSALPSD----------PNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKLVISSNSTALAVTPGTSWLLDSTYCNHM
PSLDAAVQEILFEEKRLGIVSALPSD PNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKLVISSNSTALAVTPGTSWLLDSTYCNHM
Subjt: PSLDAAVQEILFEEKRLGIVSALPSD----------PNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKLVISSNSTALAVTPGTSWLLDSTYCNHM
Query: TSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQ------LCLGLSDGTI-DWYGTEGHASSDKLRSLASNGHL
TSGISLLSSHIPVHSLPPIHSTDG+HMSISHIGT ++ T ++ T + L S+ + +D TI W+ GHASSDKLRSLASNGHL
Subjt: TSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQ------LCLGLSDGTI-DWYGTEGHASSDKLRSLASNGHL
Query: NNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCAT--------------------------------------------------
NNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCAT
Subjt: NNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCAT--------------------------------------------------
Query: ----QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLEPRARLCCF
QNGRAERKHRHILDSVRAQLLSASCPK FWGEAA+TS VIHNISPFERLHGTPPSYSNLKIFGC CFVLLHPHEHTKLEPRARLCCF
Subjt: ----QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLEPRARLCCF
Query: LGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
LGYGT+HKGFRCWDPISQRLRISRHVTFWEH MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
Subjt: LGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
|
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| KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.5e-228 | 57.95 | Show/hide |
Query: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKP--------------------------TTPMKNIDNTANTSDLDAFDTAKEL
M+KN+VAR ISTILDGTNYITWAH MRSFLIGRKLWRIV GDITKP+KP T + N A + DAFD+AKEL
Subjt: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKP--------------------------TTPMKNIDNTANTSDLDAFDTAKEL
Query: WDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPLPSLDAAVQEILFEEKR
WDFL TRFQSIGLAHYYQL+STL++LNQE+GQSVNEYLATLQPIWTQLDQAKI+PDHIRLIKVLMGLRPEYESVRAALLHR+PLPSLDAAVQEILFEEKR
Subjt: WDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPLPSLDAAVQEILFEEKR
Query: LGIVSALPSDP--NGTNI-VTNEVTFWIIVQL-------------------VHLV----------------PLVTHRNPSSP------------------
LGIVS+L SD T++ NE F +L H++ P +H+ SS
Subjt: LGIVSALPSDP--NGTNI-VTNEVTFWIIVQL-------------------VHLV----------------PLVTHRNPSSP------------------
Query: -----LKLVISSNSTALAVTPGTSWLLDSTYCNHMTSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLC-LG
LK VISS STALAVTPGTSWLLDS CNHMTS ISLLSSHIPV SLPPIHS DGN MSISHIGTVNTPTIKLSNTYHVPNLT+NLASVGQLC LG
Subjt: -----LKLVISSNSTALAVTPGTSWLLDSTYCNHMTSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLC-LG
Query: L------------------------------------------------SDGTI-DWYGTEGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLAL
L +D T+ W+ GHASS+KLRSL S G LNNVS+F+T D L+CK+AKQ AL
Subjt: L------------------------------------------------SDGTI-DWYGTEGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLAL
Query: SFPNSASLCDKPFGLIHSDIWGPAPCAT------------------------------------------------------------------------
SFP SASLCDKPFGLIHSDIWGPAPC T
Subjt: SFPNSASLCDKPFGLIHSDIWGPAPCAT------------------------------------------------------------------------
Query: ------------QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLE
QNGRAERKHRHILDSVRAQLLS SCP+ FWGEAALTS VIHNISPFERL+GTPP+YS+LK+FGCACFVLLH HEHTKLE
Subjt: ------------QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLE
Query: PRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSHTTSTLPDLPS
PRARLCCFLGYGT+HKGFRCWDPISQRLRISRHVTFWEH MFSSLSSFHASLSS SFFTDPST LFPTPDSP NT PPL+SELT SHTTS LP+LPS
Subjt: PRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSHTTSTLPDLPS
Query: ISSEESEPTPV
+ EE E PV
Subjt: ISSEESEPTPV
|
|
| KAA0058316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.7e-220 | 59.73 | Show/hide |
Query: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKPTTPMKNIDN--------------------TANTS------DLDAFDTAKEL
M+KN+VAR ISTILDGTNYITWAH MRSFLIGRKLWRIV GDITKP+KP + +N NTS DAFD+AK+L
Subjt: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKPTTPMKNIDN--------------------TANTS------DLDAFDTAKEL
Query: WDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPLPSLDAAVQEILFEEKR
WDFL TRFQSIGLAHYYQL+STL++LNQEVGQSVNEYLATLQPIWTQLDQAKI+PDHIRLIKVLMGLRPEYE VRAALLHR+ LPSLDAAVQEILFEEKR
Subjt: WDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPLPSLDAAVQEILFEEKR
Query: LGIVSALPSDP--NGTNI-VTNEVTFWIIVQL-------------------VHLVPLVTHRNPSSP----------------------------------
LGIVS+L SD T++ NE F +L H++ R P P
Subjt: LGIVSALPSDP--NGTNI-VTNEVTFWIIVQL-------------------VHLVPLVTHRNPSSP----------------------------------
Query: -----LKLVISSNSTALAVTPGTSWLLDSTYCNHMTSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLC-LG
LK VISS STALAVTPGTSWLLDS CNHMTS ISLLSSH PV SLPPIHS DGN MSISHIGTVNTPTIKLSNTYHVPNLT+NLASVGQLC LG
Subjt: -----LKLVISSNSTALAVTPGTSWLLDSTYCNHMTSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLC-LG
Query: L------------------------------------------------SDGTI-DWYGTEGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLAL
L +D T+ W+ GHASS+KLRSL S G LNNVS+F+T D L+CK+AKQ AL
Subjt: L------------------------------------------------SDGTI-DWYGTEGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLAL
Query: SFPNSASLCDKPFGLIHSDIWGPAPCAT---------------------------------QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTSVI
SFP SASLCDKPFGLIHSDIWGPAPC T QNGRAERKHRHILD SVI
Subjt: SFPNSASLCDKPFGLIHSDIWGPAPCAT---------------------------------QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTSVI
Query: HNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTD
HNISPFERL+GTPP+YS+LK+FGCACFVLLH HEHTKLEPRARLCCFLGYGT+HKGFRCWDPISQRLRISRHVTFWEH MFSSLSSFHASLSS SFFTD
Subjt: HNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTD
Query: PSTTLFPTPDSPPNTIPYPPLSSELTPSHTTSTLPDLPSISSEESEPTPV
PST LFPTPDSP NT PPL+SELT SHTTS LP+LPS+ EE E PV
Subjt: PSTTLFPTPDSPPNTIPYPPLSSELTPSHTTSTLPDLPSISSEESEPTPV
|
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| XP_016901896.1 PREDICTED: uncharacterized protein LOC107991463 [Cucumis melo] | 4.5e-310 | 87.58 | Show/hide |
Query: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKPTTPMKNIDNTANTSD------------------------------------
MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIV GDITKP+KPTTPMKNIDNTANTSD
Subjt: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKPTTPMKNIDNTANTSD------------------------------------
Query: ------LDAFDTAKELWDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPL
LD+FDTAKELWDFL+TRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQ KINPDHIRLIKVLMGLRPEYESVRAALLHR+PL
Subjt: ------LDAFDTAKELWDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPL
Query: PSLDAAVQEILFEEKRLGIVSALPSD----------PNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKLVISSNSTALAVTPGTSWLLDSTYCNHM
PSLDAAVQEILFEEKRLGIVSALPSD PNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKLVISSNSTALAVTPGTSWLLDSTYCNHM
Subjt: PSLDAAVQEILFEEKRLGIVSALPSD----------PNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKLVISSNSTALAVTPGTSWLLDSTYCNHM
Query: TSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLCLGLSDGTIDWYGTEGHASSDKLRSLASNGHLNNVSKFS
TSGISLLSSHIPVHSLPPIHSTDG+HMSISHIGTVNTPTIKLSNTYHVPNLT+NLASVGQLCLGLSDGT DWYGTEGHASSDKLRSLASNGHLNNVSKFS
Subjt: TSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLCLGLSDGTIDWYGTEGHASSDKLRSLASNGHLNNVSKFS
Query: TLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATQNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFER
TLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATQNGRAERKHRHILDSVRAQLLSASCPK FWGEAA+TS VIHNISPFER
Subjt: TLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATQNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFER
Query: LHGTPPSYSNLKIFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPT
LHGTPPSYSNLKIFG CFVLLHPHEHTKLEPRARLCCFLGYGT+HKGFRCWDPISQRLRISRHVTFWEH MFSSLSSFHASLSSSQSFFTDPSTTLFPT
Subjt: LHGTPPSYSNLKIFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPT
Query: PDSPPNTIPYPPLSSELTPS
PDSPPNTIPYPPLSSELTPS
Subjt: PDSPPNTIPYPPLSSELTPS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E0Y9 uncharacterized protein LOC107991463 | 2.2e-310 | 87.58 | Show/hide |
Query: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKPTTPMKNIDNTANTSD------------------------------------
MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIV GDITKP+KPTTPMKNIDNTANTSD
Subjt: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKPTTPMKNIDNTANTSD------------------------------------
Query: ------LDAFDTAKELWDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPL
LD+FDTAKELWDFL+TRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQ KINPDHIRLIKVLMGLRPEYESVRAALLHR+PL
Subjt: ------LDAFDTAKELWDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPL
Query: PSLDAAVQEILFEEKRLGIVSALPSD----------PNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKLVISSNSTALAVTPGTSWLLDSTYCNHM
PSLDAAVQEILFEEKRLGIVSALPSD PNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKLVISSNSTALAVTPGTSWLLDSTYCNHM
Subjt: PSLDAAVQEILFEEKRLGIVSALPSD----------PNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKLVISSNSTALAVTPGTSWLLDSTYCNHM
Query: TSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLCLGLSDGTIDWYGTEGHASSDKLRSLASNGHLNNVSKFS
TSGISLLSSHIPVHSLPPIHSTDG+HMSISHIGTVNTPTIKLSNTYHVPNLT+NLASVGQLCLGLSDGT DWYGTEGHASSDKLRSLASNGHLNNVSKFS
Subjt: TSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLCLGLSDGTIDWYGTEGHASSDKLRSLASNGHLNNVSKFS
Query: TLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATQNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFER
TLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATQNGRAERKHRHILDSVRAQLLSASCPK FWGEAA+TS VIHNISPFER
Subjt: TLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCATQNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFER
Query: LHGTPPSYSNLKIFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPT
LHGTPPSYSNLKIFG CFVLLHPHEHTKLEPRARLCCFLGYGT+HKGFRCWDPISQRLRISRHVTFWEH MFSSLSSFHASLSSSQSFFTDPSTTLFPT
Subjt: LHGTPPSYSNLKIFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPT
Query: PDSPPNTIPYPPLSSELTPS
PDSPPNTIPYPPLSSELTPS
Subjt: PDSPPNTIPYPPLSSELTPS
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| A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.8e-228 | 57.83 | Show/hide |
Query: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKP--------------------------TTPMKNIDNTANTSDLDAFDTAKEL
M+KN+VAR ISTILDGTNYITWAH MRSFLIGRKLWRIV GDITKP+KP T + N A + DAFD+AKEL
Subjt: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKP--------------------------TTPMKNIDNTANTSDLDAFDTAKEL
Query: WDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPLPSLDAAVQEILFEEKR
WDFL TRFQSIGLAHYYQL+STL++LNQE+GQSVNEYLATLQPIWTQLDQAKI+PDHIRLIKVLMGLRPEYE VRAALLHR+PLPSLDAAVQEILFEEKR
Subjt: WDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPLPSLDAAVQEILFEEKR
Query: LGIVSALPSDP--NGTNI-VTNEVTFWIIVQL-------------------VHLV----------------PLVTHRNPSSP------------------
LGIVS+L SD T++ NE F +L H++ P +H+ SS
Subjt: LGIVSALPSDP--NGTNI-VTNEVTFWIIVQL-------------------VHLV----------------PLVTHRNPSSP------------------
Query: -----LKLVISSNSTALAVTPGTSWLLDSTYCNHMTSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLC-LG
LK VISS STALAVTPGTSWLLDS CNHMTS ISLLSSHIPV SLPPIHS DGN MSISHIGTVNTPTIKLSNTYHVPNLT+NLASVGQLC LG
Subjt: -----LKLVISSNSTALAVTPGTSWLLDSTYCNHMTSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLC-LG
Query: L------------------------------------------------SDGTI-DWYGTEGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLAL
L +D T+ W+ GHASS+KLRSL S G LNNVS+F+T D L+CK+AKQ AL
Subjt: L------------------------------------------------SDGTI-DWYGTEGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLAL
Query: SFPNSASLCDKPFGLIHSDIWGPAPCAT------------------------------------------------------------------------
SFP SASLCDKPFGLIHSDIWGPAPC T
Subjt: SFPNSASLCDKPFGLIHSDIWGPAPCAT------------------------------------------------------------------------
Query: ------------QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLE
QNGRAERKHRHILDSVRAQLLS SCP+ FWGEAALTS VIHNISPFERL+GTPP+YS+LK+FGCACFVLLH HEHTKLE
Subjt: ------------QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLE
Query: PRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSHTTSTLPDLPS
PRARLCCFLGYGT+HKGFRCWDPISQRLRISRHVTFWEH MFSSLSSFHASLSS SFFTDPST LFPTPDSP NT PPL+SELT SHTTS LP+LPS
Subjt: PRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSHTTSTLPDLPS
Query: ISSEESEPTPV
+ EE E PV
Subjt: ISSEESEPTPV
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| A0A5A7UVX4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-220 | 59.73 | Show/hide |
Query: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKPTTPMKNIDN--------------------TANTS------DLDAFDTAKEL
M+KN+VAR ISTILDGTNYITWAH MRSFLIGRKLWRIV GDITKP+KP + +N NTS DAFD+AK+L
Subjt: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKPTTPMKNIDN--------------------TANTS------DLDAFDTAKEL
Query: WDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPLPSLDAAVQEILFEEKR
WDFL TRFQSIGLAHYYQL+STL++LNQEVGQSVNEYLATLQPIWTQLDQAKI+PDHIRLIKVLMGLRPEYE VRAALLHR+ LPSLDAAVQEILFEEKR
Subjt: WDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPLPSLDAAVQEILFEEKR
Query: LGIVSALPSDP--NGTNI-VTNEVTFWIIVQL-------------------VHLVPLVTHRNPSSP----------------------------------
LGIVS+L SD T++ NE F +L H++ R P P
Subjt: LGIVSALPSDP--NGTNI-VTNEVTFWIIVQL-------------------VHLVPLVTHRNPSSP----------------------------------
Query: -----LKLVISSNSTALAVTPGTSWLLDSTYCNHMTSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLC-LG
LK VISS STALAVTPGTSWLLDS CNHMTS ISLLSSH PV SLPPIHS DGN MSISHIGTVNTPTIKLSNTYHVPNLT+NLASVGQLC LG
Subjt: -----LKLVISSNSTALAVTPGTSWLLDSTYCNHMTSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLC-LG
Query: L------------------------------------------------SDGTI-DWYGTEGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLAL
L +D T+ W+ GHASS+KLRSL S G LNNVS+F+T D L+CK+AKQ AL
Subjt: L------------------------------------------------SDGTI-DWYGTEGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLAL
Query: SFPNSASLCDKPFGLIHSDIWGPAPCAT---------------------------------QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTSVI
SFP SASLCDKPFGLIHSDIWGPAPC T QNGRAERKHRHILD SVI
Subjt: SFPNSASLCDKPFGLIHSDIWGPAPCAT---------------------------------QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTSVI
Query: HNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTD
HNISPFERL+GTPP+YS+LK+FGCACFVLLH HEHTKLEPRARLCCFLGYGT+HKGFRCWDPISQRLRISRHVTFWEH MFSSLSSFHASLSS SFFTD
Subjt: HNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLEPRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTD
Query: PSTTLFPTPDSPPNTIPYPPLSSELTPSHTTSTLPDLPSISSEESEPTPV
PST LFPTPDSP NT PPL+SELT SHTTS LP+LPS+ EE E PV
Subjt: PSTTLFPTPDSPPNTIPYPPLSSELTPSHTTSTLPDLPSISSEESEPTPV
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| A0A5D3CPU5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-257 | 71.66 | Show/hide |
Query: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKPTTPMKNIDNTANTSD------------------------------------
MQKNNVARLISTILD GDITKP+KPTTPMKNIDNTANTSD
Subjt: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKPTTPMKNIDNTANTSD------------------------------------
Query: ------LDAFDTAKELWDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPL
LD+FDTAKELWDFL+TRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQ KINPDHIRLIKVLMGLRPEYESVRAALLHR+PL
Subjt: ------LDAFDTAKELWDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPL
Query: PSLDAAVQEILFEEKRLGIVSALPSD----------PNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKLVISSNSTALAVTPGTSWLLDSTYCNHM
PSLDAAVQEILFEEKRLGIVSALPSD PNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKLVISSNSTALAVTPGTSWLLDSTYCNHM
Subjt: PSLDAAVQEILFEEKRLGIVSALPSD----------PNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKLVISSNSTALAVTPGTSWLLDSTYCNHM
Query: TSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQ------LCLGLSDGTI-DWYGTEGHASSDKLRSLASNGHL
TSGISLLSSHIPVHSLPPIHSTDG+HMSISHIGT ++ T ++ T + L S+ + +D TI W+ GHASSDKLRSLASNGHL
Subjt: TSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQ------LCLGLSDGTI-DWYGTEGHASSDKLRSLASNGHL
Query: NNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCAT--------------------------------------------------
NNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCAT
Subjt: NNVSKFSTLDYLNCKLAKQLALSFPNSASLCDKPFGLIHSDIWGPAPCAT--------------------------------------------------
Query: ----QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLEPRARLCCF
QNGRAERKHRHILDSVRAQLLSASCPK FWGEAA+TS VIHNISPFERLHGTPPSYSNLKIFGC CFVLLHPHEHTKLEPRARLCCF
Subjt: ----QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLEPRARLCCF
Query: LGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
LGYGT+HKGFRCWDPISQRLRISRHVTFWEH MFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
Subjt: LGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPS
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| A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.5e-229 | 57.95 | Show/hide |
Query: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKP--------------------------TTPMKNIDNTANTSDLDAFDTAKEL
M+KN+VAR ISTILDGTNYITWAH MRSFLIGRKLWRIV GDITKP+KP T + N A + DAFD+AKEL
Subjt: MQKNNVARLISTILDGTNYITWAHLMRSFLIGRKLWRIVIGDITKPLKP--------------------------TTPMKNIDNTANTSDLDAFDTAKEL
Query: WDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPLPSLDAAVQEILFEEKR
WDFL TRFQSIGLAHYYQL+STL++LNQE+GQSVNEYLATLQPIWTQLDQAKI+PDHIRLIKVLMGLRPEYESVRAALLHR+PLPSLDAAVQEILFEEKR
Subjt: WDFLSTRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATLQPIWTQLDQAKINPDHIRLIKVLMGLRPEYESVRAALLHRDPLPSLDAAVQEILFEEKR
Query: LGIVSALPSDP--NGTNI-VTNEVTFWIIVQL-------------------VHLV----------------PLVTHRNPSSP------------------
LGIVS+L SD T++ NE F +L H++ P +H+ SS
Subjt: LGIVSALPSDP--NGTNI-VTNEVTFWIIVQL-------------------VHLV----------------PLVTHRNPSSP------------------
Query: -----LKLVISSNSTALAVTPGTSWLLDSTYCNHMTSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLC-LG
LK VISS STALAVTPGTSWLLDS CNHMTS ISLLSSHIPV SLPPIHS DGN MSISHIGTVNTPTIKLSNTYHVPNLT+NLASVGQLC LG
Subjt: -----LKLVISSNSTALAVTPGTSWLLDSTYCNHMTSGISLLSSHIPVHSLPPIHSTDGNHMSISHIGTVNTPTIKLSNTYHVPNLTYNLASVGQLC-LG
Query: L------------------------------------------------SDGTI-DWYGTEGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLAL
L +D T+ W+ GHASS+KLRSL S G LNNVS+F+T D L+CK+AKQ AL
Subjt: L------------------------------------------------SDGTI-DWYGTEGHASSDKLRSLASNGHLNNVSKFSTLDYLNCKLAKQLAL
Query: SFPNSASLCDKPFGLIHSDIWGPAPCAT------------------------------------------------------------------------
SFP SASLCDKPFGLIHSDIWGPAPC T
Subjt: SFPNSASLCDKPFGLIHSDIWGPAPCAT------------------------------------------------------------------------
Query: ------------QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLE
QNGRAERKHRHILDSVRAQLLS SCP+ FWGEAALTS VIHNISPFERL+GTPP+YS+LK+FGCACFVLLH HEHTKLE
Subjt: ------------QNGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS----------VIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLE
Query: PRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSHTTSTLPDLPS
PRARLCCFLGYGT+HKGFRCWDPISQRLRISRHVTFWEH MFSSLSSFHASLSS SFFTDPST LFPTPDSP NT PPL+SELT SHTTS LP+LPS
Subjt: PRARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSHTTSTLPDLPS
Query: ISSEESEPTPV
+ EE E PV
Subjt: ISSEESEPTPV
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| SwissProt top hits | e value | %identity | Alignment |
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.1e-18 | 37.58 | Show/hide |
Query: NGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS-VIHNISPFERLHGTPP---------SYSNLKIFGCACFVLLHPHEHTKLEPRARLCCFLGYGT
NG AER +R I++ VR+ L A PK FWGEA T+ + N SP L P SYS+LK+FGC F + + TKL+ ++ C F+GYG
Subjt: NGRAERKHRHILDSVRAQLLSASCPKIFWGEAALTS-VIHNISPFERLHGTPP---------SYSNLKIFGCACFVLLHPHEHTKLEPRARLCCFLGYGT
Query: KHKGFRCWDPISQRLRISRHVTFWEHHMFSSLS-SFHASLSSSQSFFTDPSTTLFPT
+ G+R WDP+ +++ SR V F E + ++ S +F T PST+ PT
Subjt: KHKGFRCWDPISQRLRISRHVTFWEHHMFSSLS-SFHASLSSSQSFFTDPSTTLFPT
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.0e-20 | 34.95 | Show/hide |
Query: SDIWGPAPCATQNGRAERKHRHILDSVRAQLLSASCPKIFWGEAAL----------TSVIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLEP
S + P NG +ERKHRHI+++ L AS PK +W A T ++ SPF++L GT P+Y L++FGCAC+ L P+ KL+
Subjt: SDIWGPAPCATQNGRAERKHRHILDSVRAQLLSASCPKIFWGEAAL----------TSVIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLEP
Query: RARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSHTTSTLPDLPSI
++R C FLGY + C + RL ISRHV F E+ S++ A+LS Q + S P P T P P S P H +T P PS
Subjt: RARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPSTTLFPTPDSPPNTIPYPPLSSELTPSHTTSTLPDLPSI
Query: SSEESE
S+
Subjt: SSEESE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.3e-22 | 35.43 | Show/hide |
Query: SDIWGPAPCATQNGRAERKHRHILDSVRAQLLSASCPKIFWGEA----------ALTSVIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLEP
S P NG +ERKHRHI++ L AS PK +W A T ++ SPF++L G PP+Y LK+FGCAC+ L P+ KLE
Subjt: SDIWGPAPCATQNGRAERKHRHILDSVRAQLLSASCPKIFWGEA----------ALTSVIHNISPFERLHGTPPSYSNLKIFGCACFVLLHPHEHTKLEP
Query: RARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPS----TTLFPTP---DSPP------NTIPYPPLSSE--L
+++ C F+GY + C + RL SRHV F E S ++F S S Q + P+ TTL TP +PP +T P PP S
Subjt: RARLCCFLGYGTKHKGFRCWDPISQRLRISRHVTFWEHHMFSSLSSFHASLSSSQSFFTDPS----TTLFPTP---DSPP------NTIPYPPLSSE--L
Query: TPSHTTSTLPDLPSISSEESEPT
T ++S LP S SEPT
Subjt: TPSHTTSTLPDLPSISSEESEPT
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