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Pay0010774 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0010774
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTransposon Tf2-9 polyprotein
Genome locationchr06:26026632..26027081
RNA-Seq ExpressionPay0010774
SyntenyPay0010774
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043595.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.2e-5475.69Show/hide
Query:  KKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMFLP
        KKKCSFAKSRVEYLGH+IS  GVEVD E+IRSIVEWP PTNV+E+ GFLGLT  YYRRF+HQY ++AAPLTQLLKNG FK + + +EAF KLK AMM LP
Subjt:  KKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMFLP

Query:  VLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD
        +LALP+F  PFEI+TDASGYGI  VLIQAK P+AYYNHTLA+RD
Subjt:  VLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD

KAA0046563.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]3.2e-5373.61Show/hide
Query:  KKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMFLP
        +KKCSF K+RVEYLGHIIS NG EVD E+IRSI +WPKPTN+RE  GFLGLT  YYRRF+HQY AIAAPLT LLK GGFK S++ DEAF+KLK+AMM LP
Subjt:  KKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMFLP

Query:  VLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD
        +LALPNFDQ F+I+ DA G+GIE VLIQAK P+A+Y+HTLA+RD
Subjt:  VLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD

KAA0064684.1 tetratricopeptide repeat protein SKI3 [Cucumis melo var. makuwa]8.4e-5472.22Show/hide
Query:  KKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMFLP
        KKKCSFA+ +VEYLGHI+SG GVEVD E+I+SI +WPKPTN++E+ GFLGLT  YYRRF+  Y AIAAPLTQLLK GG+K S + ++AFE+LKKAM  LP
Subjt:  KKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMFLP

Query:  VLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD
        +LALP+F+QPFEI TDASGYG+  VLIQAKRP+AYYNHTLA+RD
Subjt:  VLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD

TYK29765.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.2e-5475.69Show/hide
Query:  KKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMFLP
        KKKCSFAKSRVEYLGH+IS  GVEVD E+IRSIVEWP PTNV+E+ GFLGLT  YYRRF+HQY ++AAPLTQLLKNG FK + + +EAF KLK AMM LP
Subjt:  KKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMFLP

Query:  VLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD
        +LALP+F  PFEI+TDASGYGI  VLIQAK P+AYYNHTLA+RD
Subjt:  VLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD

XP_016901222.1 PREDICTED: uncharacterized mitochondrial protein AtMg00860-like [Cucumis melo]8.9e-80100Show/hide
Query:  MNYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFKSEKVDEAFEKLKKA
        MNYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFKSEKVDEAFEKLKKA
Subjt:  MNYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFKSEKVDEAFEKLKKA

Query:  MMFLPVLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD
        MMFLPVLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD
Subjt:  MMFLPVLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD

TrEMBL top hitse value%identityAlignment
A0A1S4DZ21 uncharacterized mitochondrial protein AtMg00860-like4.3e-80100Show/hide
Query:  MNYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFKSEKVDEAFEKLKKA
        MNYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFKSEKVDEAFEKLKKA
Subjt:  MNYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFKSEKVDEAFEKLKKA

Query:  MMFLPVLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD
        MMFLPVLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD
Subjt:  MMFLPVLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD

A0A5A7TQA2 Putative mitochondrial protein1.1e-5475.69Show/hide
Query:  KKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMFLP
        KKKCSFAKSRVEYLGH+IS  GVEVD E+IRSIVEWP PTNV+E+ GFLGLT  YYRRF+HQY ++AAPLTQLLKNG FK + + +EAF KLK AMM LP
Subjt:  KKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMFLP

Query:  VLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD
        +LALP+F  PFEI+TDASGYGI  VLIQAK P+AYYNHTLA+RD
Subjt:  VLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD

A0A5A7UZB7 Putative mitochondrial protein4.3e-80100Show/hide
Query:  MNYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFKSEKVDEAFEKLKKA
        MNYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFKSEKVDEAFEKLKKA
Subjt:  MNYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFKSEKVDEAFEKLKKA

Query:  MMFLPVLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD
        MMFLPVLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD
Subjt:  MMFLPVLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD

A0A5A7VBR1 Tetratricopeptide repeat protein SKI34.1e-5472.22Show/hide
Query:  KKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMFLP
        KKKCSFA+ +VEYLGHI+SG GVEVD E+I+SI +WPKPTN++E+ GFLGLT  YYRRF+  Y AIAAPLTQLLK GG+K S + ++AFE+LKKAM  LP
Subjt:  KKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMFLP

Query:  VLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD
        +LALP+F+QPFEI TDASGYG+  VLIQAKRP+AYYNHTLA+RD
Subjt:  VLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD

A0A5D3E378 Putative mitochondrial protein1.1e-5475.69Show/hide
Query:  KKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMFLP
        KKKCSFAKSRVEYLGH+IS  GVEVD E+IRSIVEWP PTNV+E+ GFLGLT  YYRRF+HQY ++AAPLTQLLKNG FK + + +EAF KLK AMM LP
Subjt:  KKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMFLP

Query:  VLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD
        +LALP+F  PFEI+TDASGYGI  VLIQAK P+AYYNHTLA+RD
Subjt:  VLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.65.2e-2238.1Show/hide
Query:  NYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNG---GFKSEKVDEAFEKLK
        N  L   KC F K    +LGH+++ +G++ + E+I +I ++P PT  +EI  FLGLT  YYR+FI  +  IA P+T+ LK        + + D AF+KLK
Subjt:  NYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNG---GFKSEKVDEAFEKLK

Query:  KAMMFLPVLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTL
          +   P+L +P+F + F + TDAS   +  VL Q   P++Y + TL
Subjt:  KAMMFLPVLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTL

P10401 Retrovirus-related Pol polyprotein from transposon gypsy2.2e-2037.97Show/hide
Query:  NYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLK--NGGFK-----------SE
        N  + ++K  F K  VEYLG I+S +G + D E++++I E+P+P  V ++  FLGL   YYR FI  + AIA P+T +LK  NG              +E
Subjt:  NYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLK--NGGFK-----------SE

Query:  KVDEAFEKLKKAMMFLPV-LALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTL
            AF++L+  +    V L  P+F +PF++ TDAS  GI  VL Q  RP+   + TL
Subjt:  KVDEAFEKLKKAMMFLPV-LALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTL

P20825 Retrovirus-related Pol polyprotein from transposon 2979.4e-2440.4Show/hide
Query:  NYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFKSEKVD-------EAF
        N  L   KC F K    +LGHI++ +G++ +  ++++IV +P PT  +EI  FLGLT  YYR+FI  Y  IA P+T  LK    K  K+D       EAF
Subjt:  NYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFKSEKVD-------EAF

Query:  EKLKKAMMFLPVLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTL
        EKLK  ++  P+L LP+F++ F + TDAS   +  VL Q   P+++ + TL
Subjt:  EKLKKAMMFLPVLALPNFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTL

P92523 Uncharacterized mitochondrial protein AtMg008608.0e-2349.56Show/hide
Query:  KKKCSFAKSRVEYLG--HIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMF
        +KKC+F + ++ YLG  HIISG GV  D  ++ ++V WP+P N  E+ GFLGLT  YYRRF+  Y  I  PLT+LLK    K +E    AF+ LK A+  
Subjt:  KKKCSFAKSRVEYLG--HIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMF

Query:  LPVLALPNFDQPF
        LPVLALP+   PF
Subjt:  LPVLALPNFDQPF

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus3.4e-2136.02Show/hide
Query:  NYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKN--GGFKS-----------E
        N  +  +K  F  ++VE+LG+I++ +G++ D +++R+I E P PT+V+E+  FLG+T  YYR+FI  Y  +A PLT L +      KS           E
Subjt:  NYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKN--GGFKS-----------E

Query:  KVDEAFEKLKKAMMFLPVLALPNFDQPFEIKTDASGYGIEDVLIQ----AKRPVAYYNHTL
           ++F  LK  +    +LA P F +PF + TDAS + I  VL Q      RP+AY + +L
Subjt:  KVDEAFEKLKKAMMFLPVLALPNFDQPFEIKTDASGYGIEDVLIQ----AKRPVAYYNHTL

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein5.7e-2449.56Show/hide
Query:  KKKCSFAKSRVEYLG--HIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMF
        +KKC+F + ++ YLG  HIISG GV  D  ++ ++V WP+P N  E+ GFLGLT  YYRRF+  Y  I  PLT+LLK    K +E    AF+ LK A+  
Subjt:  KKKCSFAKSRVEYLG--HIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFK-SEKVDEAFEKLKKAMMF

Query:  LPVLALPNFDQPF
        LPVLALP+   PF
Subjt:  LPVLALPNFDQPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTATATGCTAATAAAAAAGAAATGCAGCTTCGCCAAGTCACGAGTGGAGTATCTAGGGCATATTATATCTGGAAATGGAGTCGAGGTGGATTCAGAAGAAATTAG
GTCTATTGTTGAATGGCCTAAACCAACTAATGTGAGGGAGATACATGGGTTCCTTGGGTTAACAAGATATTATTATCGAAGGTTTATACACCAGTATGAGGCTATTGCTG
CTCCTCTAACACAACTGCTTAAGAATGGAGGATTTAAGAGTGAGAAAGTTGATGAAGCATTTGAGAAGTTGAAAAAAGCAATGATGTTTCTTCCAGTTCTAGCACTACCA
AATTTTGATCAACCATTTGAAATTAAAACGGATGCATCAGGCTATGGAATAGAGGATGTACTAATCCAAGCCAAGCGTCCAGTAGCTTATTACAACCATACATTAGCTAT
AAGAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTATATGCTAATAAAAAAGAAATGCAGCTTCGCCAAGTCACGAGTGGAGTATCTAGGGCATATTATATCTGGAAATGGAGTCGAGGTGGATTCAGAAGAAATTAG
GTCTATTGTTGAATGGCCTAAACCAACTAATGTGAGGGAGATACATGGGTTCCTTGGGTTAACAAGATATTATTATCGAAGGTTTATACACCAGTATGAGGCTATTGCTG
CTCCTCTAACACAACTGCTTAAGAATGGAGGATTTAAGAGTGAGAAAGTTGATGAAGCATTTGAGAAGTTGAAAAAAGCAATGATGTTTCTTCCAGTTCTAGCACTACCA
AATTTTGATCAACCATTTGAAATTAAAACGGATGCATCAGGCTATGGAATAGAGGATGTACTAATCCAAGCCAAGCGTCCAGTAGCTTATTACAACCATACATTAGCTAT
AAGAGACTGA
Protein sequenceShow/hide protein sequence
MNYMLIKKKCSFAKSRVEYLGHIISGNGVEVDSEEIRSIVEWPKPTNVREIHGFLGLTRYYYRRFIHQYEAIAAPLTQLLKNGGFKSEKVDEAFEKLKKAMMFLPVLALP
NFDQPFEIKTDASGYGIEDVLIQAKRPVAYYNHTLAIRD