| GenBank top hits | e value | %identity | Alignment |
|---|
| QHB75955.1 RpoB [Cucumis melo subsp. melo] | 1.2e-162 | 79.89 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
MPWEGY+FEDAVLISERL+YEDIYTSFHIRKYEIQTHVTSH PERITNEIPHLEA LLCNLDKNGIVMLG WVE GDILVGKL PQM+KESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGIVSKIL REDMP LQNGRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
+MNVGQIFECSLGLAGSLLDRHYRIV FDER EQEASRK VFSELYEASKQTASPWVFEPEYP KSRIFDGRTGNPFEQP+IIGKPYILKLIHQVDDKIH
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
Query: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
G SSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P+P
Subjt: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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| YP_004841775.1 RNA polymerase beta subunit [Cucumis melo subsp. melo] | 4.1e-163 | 80.43 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
MPWEGY+FEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSH PERITNEIPHLEA LLCNLDKNGIVMLG WVE GDILVGKL PQMSKESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGIVSKIL REDMP LQNGRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
+MNVGQIFECSLGLAGSLLDRHYRIV FDER EQEASRK VFSELYEASKQTASPWVFEPEYP KSRIFDGRTGNPFEQP+IIGKPYILKLIHQVDDKIH
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
Query: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
G SSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P+P
Subjt: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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| YP_009004036.1 RNA polymerase beta subunit [Cucumis hystrix] | 9.2e-163 | 80.16 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
MPWEGY+FEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSH PERITNEIPHLEA LLCNLDKNGIVMLG WVE GDILVGKL PQM+KESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGIVSKIL REDMP LQNGRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
+MNVGQIFECSLGLAGSLLDRHYRIV FDER EQEASRK VFSELYEASKQTASPWVFEPEYP KSRIFDGRTGNPFEQP+IIGKPYILKLIHQVDDKIH
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
Query: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
G SSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P+P
Subjt: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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| YP_009346477.1 RNA polymerase beta subunit [Cucumis x hytivus] | 9.2e-163 | 80.16 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
MPWEGY+FEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSH PERITNEIPHLEA LLCNLDKNGIVMLG WVE GDILVGKL PQM+KESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGIVSKIL REDMP LQNGRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
+MNVGQIFECSLGLAGSLLDRHYRIV FDER EQEASRK VFSELYEASKQTASPWVFEPEYP KSRIFDGRTGNPFEQP+IIGKPYILKLIHQVDDKIH
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
Query: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
G SSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P+P
Subjt: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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| YP_247591.1 RNA polymerase beta subunit [Cucumis sativus] | 2.3e-161 | 79.95 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
MPWEGY+FEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSH PERITNEIPHLEA LLCNLDKNGIVMLG WVE GDILVGKL PQM+KESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGIVSKIL REDMP LQNGRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTA-SPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKI
+MNVGQIFECSLGLAGSLLDRHYRIV FDER EQEASRK VFSELYEASKQTA SPWVFEPEYP KSRIFDGRTGNPFEQP+IIGKPYILKLIHQVDDKI
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTA-SPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKI
Query: HGHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
HG SSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P+P
Subjt: HGHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4ETZ9 DNA-directed RNA polymerase subunit beta | 2.0e-163 | 80.43 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
MPWEGY+FEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSH PERITNEIPHLEA LLCNLDKNGIVMLG WVE GDILVGKL PQMSKESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGIVSKIL REDMP LQNGRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
+MNVGQIFECSLGLAGSLLDRHYRIV FDER EQEASRK VFSELYEASKQTASPWVFEPEYP KSRIFDGRTGNPFEQP+IIGKPYILKLIHQVDDKIH
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
Query: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
G SSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P+P
Subjt: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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| A0A249RXK2 DNA-directed RNA polymerase subunit beta | 2.0e-163 | 80.43 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
MPWEGY+FEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSH PERITNEIPHLEA LLCNLDKNGIVMLG WVE GDILVGKL PQMSKESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGIVSKIL REDMP LQNGRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
+MNVGQIFECSLGLAGSLLDRHYRIV FDER EQEASRK VFSELYEASKQTASPWVFEPEYP KSRIFDGRTGNPFEQP+IIGKPYILKLIHQVDDKIH
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
Query: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
G SSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P+P
Subjt: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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| A0A249RYZ9 DNA-directed RNA polymerase subunit beta | 2.0e-163 | 80.43 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
MPWEGY+FEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSH PERITNEIPHLEA LLCNLDKNGIVMLG WVE GDILVGKL PQMSKESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGIVSKIL REDMP LQNGRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
+MNVGQIFECSLGLAGSLLDRHYRIV FDER EQEASRK VFSELYEASKQTASPWVFEPEYP KSRIFDGRTGNPFEQP+IIGKPYILKLIHQVDDKIH
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
Query: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
G SSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P+P
Subjt: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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| A0A249RZI0 DNA-directed RNA polymerase subunit beta | 2.0e-163 | 80.43 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
MPWEGY+FEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSH PERITNEIPHLEA LLCNLDKNGIVMLG WVE GDILVGKL PQMSKESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGIVSKIL REDMP LQNGRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
+MNVGQIFECSLGLAGSLLDRHYRIV FDER EQEASRK VFSELYEASKQTASPWVFEPEYP KSRIFDGRTGNPFEQP+IIGKPYILKLIHQVDDKIH
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
Query: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
G SSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P+P
Subjt: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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| A0A286NFR1 DNA-directed RNA polymerase subunit beta | 2.0e-163 | 80.43 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
MPWEGY+FEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSH PERITNEIPHLEA LLCNLDKNGIVMLG WVE GDILVGKL PQMSKESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGIVSKIL REDMP LQNGRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
+MNVGQIFECSLGLAGSLLDRHYRIV FDER EQEASRK VFSELYEASKQTASPWVFEPEYP KSRIFDGRTGNPFEQP+IIGKPYILKLIHQVDDKIH
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
Query: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
G SSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P+P
Subjt: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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| SwissProt top hits | e value | %identity | Alignment |
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| A0A327 DNA-directed RNA polymerase subunit beta | 8.4e-159 | 76.68 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
MPWEGY+FEDAVLISERL+YEDIYTSFHIRKYEIQTHVTS PER+TNEIPHLEA LL NLDK+GIVMLG WVE GDILVGKL PQM KESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGI+SKIL R+DMP LQ+GRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
+MNVGQIFECSLGLAGSLLDRHYRI FDER EQEASRK VFSELY+ASKQTA+PWVFE EYP KSRIFDGRTGNPFEQP++IGKPYILKLIHQVDDKIH
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
Query: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
G SSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P P
Subjt: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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| Q2L8Z9 DNA-directed RNA polymerase subunit beta | 2.2e-159 | 76.68 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
MPWEGY+FEDAVLISERL+YEDIYTSFHIRKYEIQTHVTS PERITNEIPHLEA LL NLDKNGIVMLG WVE GDILVGKL PQ++KESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGI+SKIL R+DMP LQ+GRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
+MNVGQ+FECSLGLAGSLLDRHYRI FDER EQEASRK VFSELY+ASKQTA+PWVFEPEYP KSRIFDGRTG PFEQP+IIGKPYILKLIHQVDDKIH
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
Query: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
G SSGHYALVTQQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P+P
Subjt: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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| Q49L06 DNA-directed RNA polymerase subunit beta | 8.4e-159 | 76.41 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
+PWEGY+FEDAVLISERL+YEDIYTSFHIRKYEIQTHVTS PERITNEIPHLEA LL NLDKNGIVMLG WVE GD+LVGKL PQ +KESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGI+SKIL R+DMP LQ+GRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
+MNVGQIFECSLGLAG LLDRHYRI FDER EQEASRK VFSELYEAS+QTA+PWVFEPEYP KSRIFDGRTG+PFEQP+IIGKPYILKLIHQVDDKIH
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
Query: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
G SSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P+P
Subjt: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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| Q4VZP1 DNA-directed RNA polymerase subunit beta | 1.2e-165 | 80.16 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
MPWEGY+FEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSH PERITNEIPHLEA LLCNLDKNGIVMLG WVE GDILVGKL PQM+KESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGIVSKIL REDMP LQNGRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
+MNVGQIFECSLGLAGSLLDRHYRIV FDER EQEASRK VFSELYEASKQTASPWVFEPEYP KSRIFDGRTGNPFEQP+IIGKPYILKLIHQVDDKIH
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
Query: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
G SSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P+P
Subjt: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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| Q68S14 DNA-directed RNA polymerase subunit beta | 1.1e-158 | 76.68 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
MPWEGY+FEDAVLISERL+YEDIYTSFHIRKYEI+THVTS PER+TNEIPHLEA LL NLDKNGIVMLG WVE GDILVGKL PQM KESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGI+SKIL R+DMP LQ+GRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
+MNVGQIFECSLGLAG LLDRHYRI FDER EQEASRK VFSELYEA KQTA+PWVFEPEYP KSRIFDGRTG+PFEQP+IIGKPYILKLIHQVDDKIH
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
Query: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
G SSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P P
Subjt: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G29940.1 nuclear RNA polymerase A2 | 6.6e-18 | 28.57 | Show/hide |
Query: VGDKVAGRHGNKGIVSKILLREDMPCL-QNGRPVDMVFNPLRVPLQMNVGQIFECSLGLAGSLLDRHYRIVAFDE-----RDEQEASRKPVFSELYEASK
+GDK + RHG KG+ S++ DMP G D++ NP P +M + + E GSL + F + E+E+ + +L K
Subjt: VGDKVAGRHGNKGIVSKILLREDMPCL-QNGRPVDMVFNPLRVPLQMNVGQIFECSLGLAGSLLDRHYRIVAFDE-----RDEQEASRKPVFSELYEASK
Query: QTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIHGHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
+ + ++ G G + I +G Y +L H V DK S+G +T QP++GR + GG R GEME +L G +++L + L
Subjt: QTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIHGHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYK
Query: SDH
SDH
Subjt: SDH
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| AT4G21710.1 DNA-directed RNA polymerase family protein | 1.2e-30 | 28.32 | Show/hide |
Query: WEGYSFEDAVLISERLIYEDIYTSFHIRKY-----EIQTHVTSH--RPER-ITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMP-----QMSK
+ GY+ ED+V++++ I + S R Y ++ T V RP+R T + H D LD +G+ G V D+++GK P +
Subjt: WEGYSFEDAVLISERLIYEDIYTSFHIRKY-----EIQTHVTSH--RPER-ITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMP-----QMSK
Query: ESSYAPKDRLLQ---------------------AILGIQKREIK---VGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPLQMNVGQIFE
S Y +D + + ++ R ++ +GDK + RHG KG V +EDMP G D++ NP +P +M +GQ+ E
Subjt: ESSYAPKDRLLQ---------------------AILGIQKREIK---VGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPLQMNVGQIFE
Query: CSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIHGHSSGHYAL
C +G + + + F + S+ L++ Q FE R+++G TG P I +G Y +L H VDDKIH G +
Subjt: CSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIHGHSSGHYAL
Query: VTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR
+T+QP GR++ GG R GEME + G AH L+E L +SD R
Subjt: VTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR
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| AT5G45140.1 nuclear RNA polymerase C2 | 5.1e-26 | 27.03 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSH-RPERITNEIPHL---EADLLCNLDKNGIVMLGLWVEMGDILVGKLMP--------QMS
M + GY EDA+++++ + ++K + + +RI IP +A+ + LD +G+ G + DI + K +P
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSH-RPERITNEIPHL---EADLLCNLDKNGIVMLGLWVEMGDILVGKLMP--------QMS
Query: KESSYAP------------------------KDRLLQAILGIQKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPLQMNVGQIF
+S Y P K +L + R ++GDK + RHG KG+ I+ +ED P + G D++ NP P +M VG++
Subjt: KESSYAP------------------------KDRLLQAILGIQKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPLQMNVGQIF
Query: ECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIHGHSSGHYA
E AG R + AF ER + + + L E Y K ++ G +G P E I +G Y KL H V DK+H SG
Subjt: ECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIHGHSSGHYA
Query: LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSD
++T+QP G++K GG RVGEME L +G + ++ E L SD
Subjt: LVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSD
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| ATCG00190.1 RNA polymerase subunit beta | 7.3e-158 | 75.87 | Show/hide |
Query: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
MPWEGY+FEDAVLISE L+Y DIYTSFHIRKYEIQTHVT+ PERIT EIPHLE LL NLDKNGIVMLG WVE GDILVGKL PQ++KESSYAP+DRLL
Subjt: MPWEGYSFEDAVLISERLIYEDIYTSFHIRKYEIQTHVTSHRPERITNEIPHLEADLLCNLDKNGIVMLGLWVEMGDILVGKLMPQMSKESSYAPKDRLL
Query: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
+AILGI QKREIKVGDKVAGRHGNKGI+SKIL R+DMP LQ+GRPVDMVFNPL VP
Subjt: QAILGI--------------------------------------------QKREIKVGDKVAGRHGNKGIVSKILLREDMPCLQNGRPVDMVFNPLRVPL
Query: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
+MNVGQIFECSLGLAGSLLDRHYRI FDER EQEASRK VFSELYEASKQTA+PWVFEPEYP KSRIFDGRTG+PFEQP+IIGKPYILKLIHQVDDKIH
Subjt: QMNVGQIFECSLGLAGSLLDRHYRIVAFDERDEQEASRKPVFSELYEASKQTASPWVFEPEYPRKSRIFDGRTGNPFEQPIIIGKPYILKLIHQVDDKIH
Query: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
G SSGHYALVTQQPLRGR+KQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIR RQEVL + T P+P
Subjt: GHSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRGRQEVLAVPSLPATEPRP
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