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Pay0010836 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0010836
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionProtein RADIALIS-like 1
Genome locationchr01:18494138..18494374
RNA-Seq ExpressionPay0010836
SyntenyPay0010836
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR044636 - Transcription factor RADIALIS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036165.1 protein RADIALIS-like 1 [Cucumis melo var. makuwa]2.4e-3697.44Show/hide
Query:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT
        MASMTAHGPSTPWT KQNKAFEKALAVYDKDTPERWLNV+KAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT
Subjt:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT

KAE8645640.1 hypothetical protein Csa_020521 [Cucumis sativus]8.7e-3492.31Show/hide
Query:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT
        MASMTAHGPST WT+ QNKAFEKALAVYDKDTPERWLNV+KAIGGKTEEEVK HYQLLVEDVKHIESGEIPFPYRR T
Subjt:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT

XP_008447025.1 PREDICTED: protein RADIALIS-like 1 [Cucumis melo]1.9e-2885.33Show/hide
Query:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYR
        MASM+AHG S  WT KQNKAFEKALA+YDKDTP+RWLNV+KAIGGKTEEEVKRHYQLL+EDVKHIESG++PFPYR
Subjt:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYR

XP_008447026.1 PREDICTED: protein RADIALIS-like 1 [Cucumis melo]4.2e-2880.77Show/hide
Query:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT
        MASM+AHG ST WT  +NKAFEKALA+YDKDTPERWLNV+KAIGGKTEE+VKRHYQLL+EDV HIE+G+IPFPYR  T
Subjt:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT

XP_022952074.1 protein RADIALIS-like 1 [Cucurbita moschata]1.4e-2882.89Show/hide
Query:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRR
        MASM+AHG +  WT KQNKAFEKALAVYD+DTPERWLNV+KAIGGKTEEEVKRHYQLL++DVK IESGE+PFPY R
Subjt:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRR

TrEMBL top hitse value%identityAlignment
A0A0A0K3K0 SANT domain-containing protein6.9e-2982.05Show/hide
Query:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT
        MASM+AHG S+ WT  +NKAFEKALA+YDKDTPERWLNV+KAIGGKTEEEVKRHYQLL+EDV HIESG+IPFPYR+ T
Subjt:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT

A0A0A0K3K5 SANT domain-containing protein1.2e-2887.67Show/hide
Query:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFP
        MASMTAHGPST WT+ QNKAFEKALAVYDKDTPERWLNV+KAIGGKTEEEVK HYQLLVEDVKHIESG +  P
Subjt:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFP

A0A1S3BGF6 protein RADIALIS-like 19.0e-2985.33Show/hide
Query:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYR
        MASM+AHG S  WT KQNKAFEKALA+YDKDTP+RWLNV+KAIGGKTEEEVKRHYQLL+EDVKHIESG++PFPYR
Subjt:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYR

A0A5A7T3V4 Protein RADIALIS-like 11.2e-3697.44Show/hide
Query:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT
        MASMTAHGPSTPWT KQNKAFEKALAVYDKDTPERWLNV+KAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT
Subjt:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT

A0A6J1GKK4 protein RADIALIS-like 16.9e-2982.89Show/hide
Query:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRR
        MASM+AHG +  WT KQNKAFEKALAVYD+DTPERWLNV+KAIGGKTEEEVKRHYQLL++DVK IESGE+PFPY R
Subjt:  MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRR

SwissProt top hitse value%identityAlignment
F4JVB8 Protein RADIALIS-like 11.3e-2162.34Show/hide
Query:  MASMTAHGPST-PWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRR
        MAS +    S+  WT KQNKAFE+ALA YD+DTP RW NV+K +GGKT EEVKRHY+LLV+D+  IE+G +PFP  R
Subjt:  MASMTAHGPST-PWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRR

Q1A173 Protein RADIALIS-like 62.3e-2169.84Show/hide
Query:  TPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFP
        +PWT  QNK FE+ALAVYDKDTP+RW NV+KA+GGKT EEVKRHY +LVED+ +IE+G +P P
Subjt:  TPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFP

Q58FS3 Transcription factor RADIALIS6.5e-2462.16Show/hide
Query:  TAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT
        +  G   PW+ K+NKAFE+ALAVYDKDTP+RW NV++A+ G+T EEVK+HY++LVED+K+IESG++PFP  R T
Subjt:  TAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT

Q8GW75 Protein RADIALIS-like 52.8e-1965.62Show/hide
Query:  STPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFP
        S+ WT KQNK FE+ALAVYDKDTP+RW NV+KA+G K+ EEVKRHY +LVED+ +IE   +P P
Subjt:  STPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFP

Q9SIJ5 Protein RADIALIS-like 26.0e-2263.16Show/hide
Query:  SMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT
        SM+++G S  WTVKQNKAFE+ALAVYD+DTP+RW NV++A+GGKT EE KR Y LLV D++ IE+G +PFP  + T
Subjt:  SMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT

Arabidopsis top hitse value%identityAlignment
AT1G19510.1 RAD-like 52.0e-2065.62Show/hide
Query:  STPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFP
        S+ WT KQNK FE+ALAVYDKDTP+RW NV+KA+G K+ EEVKRHY +LVED+ +IE   +P P
Subjt:  STPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFP

AT1G75250.1 RAD-like 61.6e-2269.84Show/hide
Query:  TPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFP
        +PWT  QNK FE+ALAVYDKDTP+RW NV+KA+GGKT EEVKRHY +LVED+ +IE+G +P P
Subjt:  TPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFP

AT1G75250.2 RAD-like 61.6e-2269.84Show/hide
Query:  TPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFP
        +PWT  QNK FE+ALAVYDKDTP+RW NV+KA+GGKT EEVKRHY +LVED+ +IE+G +P P
Subjt:  TPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFP

AT2G21650.1 Homeodomain-like superfamily protein4.3e-2363.16Show/hide
Query:  SMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT
        SM+++G S  WTVKQNKAFE+ALAVYD+DTP+RW NV++A+GGKT EE KR Y LLV D++ IE+G +PFP  + T
Subjt:  SMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT

AT4G39250.1 RAD-like 19.6e-2362.34Show/hide
Query:  MASMTAHGPST-PWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRR
        MAS +    S+  WT KQNKAFE+ALA YD+DTP RW NV+K +GGKT EEVKRHY+LLV+D+  IE+G +PFP  R
Subjt:  MASMTAHGPST-PWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATGACTGCTCATGGACCAAGCACTCCATGGACTGTAAAGCAAAACAAAGCATTTGAGAAAGCTTTGGCAGTTTATGATAAAGACACACCTGAAAGATGGCT
GAATGTTTCGAAGGCCATTGGTGGGAAAACTGAAGAAGAAGTGAAAAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAATCTGGTGAAATTCCTTTTCCTT
ATCGAAGATTAACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATGACTGCTCATGGACCAAGCACTCCATGGACTGTAAAGCAAAACAAAGCATTTGAGAAAGCTTTGGCAGTTTATGATAAAGACACACCTGAAAGATGGCT
GAATGTTTCGAAGGCCATTGGTGGGAAAACTGAAGAAGAAGTGAAAAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAATCTGGTGAAATTCCTTTTCCTT
ATCGAAGATTAACGTGA
Protein sequenceShow/hide protein sequence
MASMTAHGPSTPWTVKQNKAFEKALAVYDKDTPERWLNVSKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT