; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0010847 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0010847
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr08:3615978..3617021
RNA-Seq ExpressionPay0010847
SyntenyPay0010847
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN65716.1 hypothetical protein VITISV_015039 [Vitis vinifera]4.3e-10760.36Show/hide
Query:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---
        M+ YGF+Q +SDHTLFLK  Q KLTALI+YVDDMI+TG+D++EIA L+++L+ EFEMKNLGGLKYFLGIEV RS++GI LSQRKYILDLL E+G+LD   
Subjt:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---

Query:  -------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFV
                                                          M+I+RYLK  PGKG+ F KN HL V G+TDADWAG++ DR+ST+GYFTFV
Subjt:  -------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFV

Query:  GGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRS
        GGNLVTWRSKKQ VVALSSAEAEFRG+AKG+CELLWLRRLL E+GFAP   M L+CD++ AIDISHNP+QHDRTKHVE+DRHFIK+ L++ +IQ   V+S
Subjt:  GGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRS

Query:  GEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT
         +QLADILTKAV SK F   +DKLG  D Y+PT
Subjt:  GEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT

KAA0037867.1 putative polyprotein (retrotrasposon protein) [Cucumis melo var. makuwa]2.0e-14479.83Show/hide
Query:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---
        MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFL IEVMRS+QGIVLSQRKYILDLLAEIGMLD   
Subjt:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---

Query:  ---------------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS
                                                                        MRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS
Subjt:  ---------------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS

Query:  VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE
        VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE
Subjt:  VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE

Query:  KLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT
        KLESNVIQMVHVRSGEQLADILTKAVMSK FTSIIDKLGMQDAYIPT
Subjt:  KLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT

KYP39293.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan]5.2e-10557.35Show/hide
Query:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---
        M+ YGF+Q ++DHTLFLK  Q K+TALI+YVDDMI+TG+D++EI  L++KL  EFEMKNLGGLKYFLGIEV RS+QGI LSQRKYILDLL+E+G+LD   
Subjt:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---

Query:  ---------------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS
                                                                        MRI++YLK  PGKG+ F KN HL V G+TDADWAG 
Subjt:  ---------------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS

Query:  VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE
         ++RRST+GYFTFVGGNLVTWRSKKQ VV+LSSAEAEFRG+AKG+CELLW+RRLL E+GF P+ AM L+CD++ AI I+HNPVQHDRTKHVE+DRHFIK+
Subjt:  VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE

Query:  KLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT
         LE+ +IQ   V+S EQLADILTKAV SK F++ + KLGM+D Y+PT
Subjt:  KLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT

RVW82645.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]6.8e-10557.35Show/hide
Query:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---
        M+ YGF+Q +SDHTLFLK  Q KLT LI+YVDDMI+TG+D++EIA L+++L+ EFEMKNLGGLKYFLGIEV RS++GI LSQRKYILDLL ++G+LD   
Subjt:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---

Query:  ---------------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS
                                                                        M+I+RYLK  PGKG+ F KN HL V G+TDADWAG+
Subjt:  ---------------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS

Query:  VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE
        + DR+ST+GYFTFVGGNLVTWRSKKQ VVALSSAEAEFRG+AKG+CELLWLRRLL E+GFAP   M L+CD++ AIDISHNP+QHDRTKHVE+DRHFIK+
Subjt:  VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE

Query:  KLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT
         L++ +IQ   V+S +QLADILTKAV SK F   +DKLG+ D Y+PT
Subjt:  KLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT

TYK09814.1 putative polyprotein (retrotrasposon protein) [Cucumis melo var. makuwa]2.0e-14479.54Show/hide
Query:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---
        MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIV GNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRS+QGIVLSQRKYILDLLAEIGMLD   
Subjt:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---

Query:  ---------------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS
                                                                        MRI+RYLKGCPGKGITFKKNGHLDVSGFTDADWAGS
Subjt:  ---------------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS

Query:  VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE
        VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE
Subjt:  VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE

Query:  KLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT
        KLESNVIQMVHVRSGEQLADILTKAVMSK FTSIIDKLGMQDAYIPT
Subjt:  KLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT

TrEMBL top hitse value%identityAlignment
A0A2N9I5I6 Integrase catalytic domain-containing protein6.6e-10657.35Show/hide
Query:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---
        M+ YGF+Q +SDHTLFLK    K+TALI+YVDDMI+TG+D +EI+ L+++LS EFEMKNLGGLKYFLGIEV RSRQGI LSQRKY+LDLL+E+G+L+   
Subjt:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---

Query:  ---------------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS
                                                                        +RI+RYLK  PGKG+ F KN HL+V G+TDADWAG+
Subjt:  ---------------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS

Query:  VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE
        +SDR+ST+GYFTFVGGNLVTWRSKKQ VVALSSAEAEFRG+AKG+CELLWLRRLL E+GFAP+  M+L+CD++ AIDISHNPVQHDRTKHVE+DRHFIK 
Subjt:  VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE

Query:  KLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT
         LE  +I+   V+S +QLADILTKAV ++ F   +DKLG++D Y PT
Subjt:  KLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT

A0A2N9IGY8 Integrase catalytic domain-containing protein4.9e-10962.19Show/hide
Query:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---
        M+ YGF+Q +SDHTLFLK    K+TALI+YVDDMI+TG+D +EI+ L+++LS EFEMKNLGGLKYFLGIEV RSRQGI LSQRKY+LDLL+E+G+L+   
Subjt:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---

Query:  ------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKKQS
                                             +RI+RYLK  PGKG+ F KN HL+V G+TDADWAG++SDR+ST+GYFTFVGGNLVTWRSKKQ 
Subjt:  ------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKKQS

Query:  VVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVM
        VVALSSAEAEFRG+AKG+CELLWLRRLL E+GFAP+  M+L+CD++ AIDISHNPVQHDRTKHVE+DRHFIK  LE  +I+   V+S +QLADILTKAV 
Subjt:  VVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVM

Query:  SKTFTSIIDKLGMQDAYIPT
        ++ F   +DKLG++D Y PT
Subjt:  SKTFTSIIDKLGMQDAYIPT

A0A5A7T8G9 Putative polyprotein (Retrotrasposon protein)9.5e-14579.83Show/hide
Query:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---
        MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFL IEVMRS+QGIVLSQRKYILDLLAEIGMLD   
Subjt:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---

Query:  ---------------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS
                                                                        MRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS
Subjt:  ---------------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS

Query:  VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE
        VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE
Subjt:  VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE

Query:  KLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT
        KLESNVIQMVHVRSGEQLADILTKAVMSK FTSIIDKLGMQDAYIPT
Subjt:  KLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT

A0A5D3CF38 Putative polyprotein (Retrotrasposon protein)9.5e-14579.54Show/hide
Query:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---
        MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIV GNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRS+QGIVLSQRKYILDLLAEIGMLD   
Subjt:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---

Query:  ---------------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS
                                                                        MRI+RYLKGCPGKGITFKKNGHLDVSGFTDADWAGS
Subjt:  ---------------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGS

Query:  VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE
        VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE
Subjt:  VSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKE

Query:  KLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT
        KLESNVIQMVHVRSGEQLADILTKAVMSK FTSIIDKLGMQDAYIPT
Subjt:  KLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT

A5BJC6 Integrase catalytic domain-containing protein2.1e-10760.36Show/hide
Query:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---
        M+ YGF+Q +SDHTLFLK  Q KLTALI+YVDDMI+TG+D++EIA L+++L+ EFEMKNLGGLKYFLGIEV RS++GI LSQRKYILDLL E+G+LD   
Subjt:  MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD---

Query:  -------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFV
                                                          M+I+RYLK  PGKG+ F KN HL V G+TDADWAG++ DR+ST+GYFTFV
Subjt:  -------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFV

Query:  GGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRS
        GGNLVTWRSKKQ VVALSSAEAEFRG+AKG+CELLWLRRLL E+GFAP   M L+CD++ AIDISHNP+QHDRTKHVE+DRHFIK+ L++ +IQ   V+S
Subjt:  GGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRS

Query:  GEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT
         +QLADILTKAV SK F   +DKLG  D Y+PT
Subjt:  GEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.0e-3528.53Show/hide
Query:  KRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGM----------------------
        K N  +   +++YVDD+++   D   +   ++ L  +F M +L  +K+F+GI +      I LSQ  Y+  +L++  M                      
Subjt:  KRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGM----------------------

Query:  --------------------------------------------LDFMRIIRYLKGCPGKGITFKKNGHLD--VSGFTDADWAGSVSDRRSTAGY-FTFV
                                                     +  R++RYLKG     + FKKN   +  + G+ D+DWAGS  DR+ST GY F   
Subjt:  --------------------------------------------LDFMRIIRYLKGCPGKGITFKKNGHLD--VSGFTDADWAGSVSDRRSTAGY-FTFV

Query:  GGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRS
          NL+ W +K+Q+ VA SS EAE+  + + + E LWL+ LL  +       + +Y D++  I I++NP  H R KH++I  HF +E++++NVI + ++ +
Subjt:  GGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRS

Query:  GEQLADILTKAVMSKTFTSIIDKLGM
          QLADI TK + +  F  + DKLG+
Subjt:  GEQLADILTKAVMSKTFTSIIDKLGM

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-3530.2Show/hide
Query:  MQSYGFKQCDSDHTLFLKR-NQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSR--QGIVLSQRKYILDLLAEIGMLD
        M+S  + +  SD  ++ KR ++     L++YVDDM++ G D   IA L+  LS  F+MK+LG  +  LG++++R R  + + LSQ KYI  +L    M +
Subjt:  MQSYGFKQCDSDHTLFLKR-NQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSR--QGIVLSQRKYILDLLAEIGMLD

Query:  -------------------------------------------------------------FMR------------IIRYLKGCPGKGITFKKNGHLDVS
                                                                     F+             I+RYL+G  G  + F  +  + + 
Subjt:  -------------------------------------------------------------FMR------------IIRYLKGCPGKGITFKKNGHLDVS

Query:  GFTDADWAGSVSDRRSTAGY-FTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTK
        G+TDAD AG + +R+S+ GY FTF GG  ++W+SK Q  VALS+ EAE+    +   E++WL+R L ELG    + + +YCDS+ AID+S N + H RTK
Subjt:  GFTDADWAGSVSDRRSTAGY-FTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTK

Query:  HVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGM
        H+++  H+I+E ++   ++++ + + E  AD+LTK V    F    + +GM
Subjt:  HVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGM

P92519 Uncharacterized mitochondrial protein AtMg008109.4e-2531.39Show/hide
Query:  LIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD-----------------------------
        L++YVDD+++TG+    +  L  +LS  F MK+LG + YFLGI++     G+ LSQ KY   +L   GMLD                             
Subjt:  LIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD-----------------------------

Query:  ------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKKQS
                                              R++RY+KG    G+   KN  L+V  F D+DWAG  S RRST G+ TF+G N+++W +K+Q 
Subjt:  ------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKKQS

Query:  VVALSSAEAEFRGVAKGICELLW
         V+ SS E E+R +A    EL W
Subjt:  VVALSSAEAEFRGVAKGICELLW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.1e-4834.82Show/hide
Query:  GFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGML--------
        GF    SD +LF+ +  + +  +++YVDD+++TGND   +      LS  F +K+   L YFLGIE  R   G+ LSQR+YILDLLA   M+        
Subjt:  GFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGML--------

Query:  ----------------------------------------------DFM------------RIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDR
                                                       FM            RI+RYL G P  GI  KK   L +  ++DADWAG   D 
Subjt:  ----------------------------------------------DFM------------RIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDR

Query:  RSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEKLES
         ST GY  ++G + ++W SKKQ  V  SS EAE+R VA    E+ W+  LL ELG   T+   +YCD+  A  +  NPV H R KH+ ID HFI+ +++S
Subjt:  RSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEKLES

Query:  NVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGM
          +++VHV + +QLAD LTK +    F +   K+G+
Subjt:  NVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGM

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.9e-4734.23Show/hide
Query:  GFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD-------
        GF    SD +LF+ +    +  +++YVDD+++TGNDT  +      LS  F +K    L YFLGIE  R  QG+ LSQR+Y LDLLA   ML        
Subjt:  GFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD-------

Query:  -----------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDR
                                                                     R++RYL G P  GI  KK   L +  ++DADWAG   D 
Subjt:  -----------------------------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDR

Query:  RSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEKLES
         ST GY  ++G + ++W SKKQ  V  SS EAE+R VA    EL W+  LL ELG   +    +YCD+  A  +  NPV H R KH+ +D HFI+ +++S
Subjt:  RSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEKLES

Query:  NVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGM
          +++VHV + +QLAD LTK +    F +   K+G+
Subjt:  NVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGM

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.5e-4333.56Show/hide
Query:  YGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGML-------
        +GF Q  SDHT FLK        +++YVDD+I+  N+   +  L+ +L   F++++LG LKYFLG+E+ RS  GI + QRKY LDLL E G+L       
Subjt:  YGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGML-------

Query:  --------------DF---------------------------------------------MRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSD
                      DF                                             M+I+ Y+KG  G+G+ +     + +  F+DA +      
Subjt:  --------------DF---------------------------------------------MRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSD

Query:  RRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEK
        RRST GY  F+G +L++W+SKKQ VV+ SSAEAE+R ++    E++WL +   EL    ++   L+CD+  AI I+ N V H+RTKH+E D H ++E+
Subjt:  RRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEK

ATMG00810.1 DNA/RNA polymerases superfamily protein6.7e-2631.39Show/hide
Query:  LIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD-----------------------------
        L++YVDD+++TG+    +  L  +LS  F MK+LG + YFLGI++     G+ LSQ KY   +L   GMLD                             
Subjt:  LIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLD-----------------------------

Query:  ------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKKQS
                                              R++RY+KG    G+   KN  L+V  F D+DWAG  S RRST G+ TF+G N+++W +K+Q 
Subjt:  ------------------------------------FMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKKQS

Query:  VVALSSAEAEFRGVAKGICELLW
         V+ SS E E+R +A    EL W
Subjt:  VVALSSAEAEFRGVAKGICELLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGCTACGGATTCAAACAATGTGACTCTGACCACACATTGTTCCTGAAAAGAAACCAGGAGAAGTTGACAGCCTTAATCATTTATGTCGATGACATGATAGTGAC
GGGAAATGACACACAAGAAATTGCAACTCTGGAAAAGAAACTCTCAGGTGAATTCGAGATGAAGAATTTGGGAGGATTGAAGTATTTTCTTGGAATTGAGGTAATGCGAT
CAAGACAAGGTATTGTATTATCTCAAAGAAAATACATTTTGGATCTACTCGCAGAGATTGGAATGCTGGACTTCATGCGAATAATACGATATCTGAAGGGATGCCCAGGC
AAGGGTATAACTTTCAAGAAGAATGGACACCTTGATGTTTCAGGTTTCACTGATGCTGATTGGGCAGGGAGTGTAAGTGATAGAAGGTCCACAGCAGGTTACTTTACCTT
TGTCGGAGGTAATCTAGTAACTTGGAGAAGTAAGAAACAAAGTGTTGTAGCACTCTCTAGTGCAGAAGCTGAATTCAGAGGAGTTGCGAAGGGAATATGTGAATTATTGT
GGTTGAGGAGGTTACTCGGAGAATTGGGATTCGCACCTACTCAGGCAATGGACTTATATTGTGACAGTCGACCTGCGATTGATATCTCTCACAACCCGGTACAGCATGAC
AGAACTAAACATGTGGAGATAGATCGACATTTTATAAAGGAGAAACTGGAATCAAATGTCATTCAGATGGTGCATGTGAGATCAGGGGAGCAACTCGCAGACATATTAAC
GAAGGCTGTCATGAGCAAAACGTTCACCAGCATAATTGACAAGTTAGGTATGCAAGATGCTTACATACCAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGCTACGGATTCAAACAATGTGACTCTGACCACACATTGTTCCTGAAAAGAAACCAGGAGAAGTTGACAGCCTTAATCATTTATGTCGATGACATGATAGTGAC
GGGAAATGACACACAAGAAATTGCAACTCTGGAAAAGAAACTCTCAGGTGAATTCGAGATGAAGAATTTGGGAGGATTGAAGTATTTTCTTGGAATTGAGGTAATGCGAT
CAAGACAAGGTATTGTATTATCTCAAAGAAAATACATTTTGGATCTACTCGCAGAGATTGGAATGCTGGACTTCATGCGAATAATACGATATCTGAAGGGATGCCCAGGC
AAGGGTATAACTTTCAAGAAGAATGGACACCTTGATGTTTCAGGTTTCACTGATGCTGATTGGGCAGGGAGTGTAAGTGATAGAAGGTCCACAGCAGGTTACTTTACCTT
TGTCGGAGGTAATCTAGTAACTTGGAGAAGTAAGAAACAAAGTGTTGTAGCACTCTCTAGTGCAGAAGCTGAATTCAGAGGAGTTGCGAAGGGAATATGTGAATTATTGT
GGTTGAGGAGGTTACTCGGAGAATTGGGATTCGCACCTACTCAGGCAATGGACTTATATTGTGACAGTCGACCTGCGATTGATATCTCTCACAACCCGGTACAGCATGAC
AGAACTAAACATGTGGAGATAGATCGACATTTTATAAAGGAGAAACTGGAATCAAATGTCATTCAGATGGTGCATGTGAGATCAGGGGAGCAACTCGCAGACATATTAAC
GAAGGCTGTCATGAGCAAAACGTTCACCAGCATAATTGACAAGTTAGGTATGCAAGATGCTTACATACCAACTTGA
Protein sequenceShow/hide protein sequence
MQSYGFKQCDSDHTLFLKRNQEKLTALIIYVDDMIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLDFMRIIRYLKGCPG
KGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHD
RTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT