| GenBank top hits | e value | %identity | Alignment |
|---|
| AAO73521.1 gag-pol polyprotein [Glycine max] | 1.8e-306 | 53.53 | Show/hide |
Query: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
++ TS++ +A + WY DSGCSRHM G + + N++ C T +VTFGDG+KGKII G + + LP + V+F C
Subjt: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
Query: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
+V N+++++ M G R +NCY W ++ S TC ++ ++ +WH+ G + +RG++KII A+ GIP+L + CG+CQIGKQ + +H+ L+
Subjt: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
Query: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
T++VLELLHMDLMG MQ ESL GKRY VVVDD+SR+TWV F++ K +T E+ K L L+LQREK I +I+SDHG+EF++ FC EGI HEFSA
Subjt: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
Query: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA NTAC+IHNRVT+R T TLYE+WK RK +VK+FH+FGS CYILADRE R+K D +S
Subjt: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
Query: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
GIFLGYS NSRAYRVFN+R +VM++INVV++DL A K +E+ N++DA ++ + S ++E + + S ++K HP IIGD
Subjt: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
Query: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
P+ G+ TR +E +++V + C++S IEP V AL DE+W+N MQEEL QF+RN VW L K +E +T+NK RLVAQGYT
Subjt: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
Query: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Q+EG+DFDETFAPVA+LE+IRLLLG++CI KFKLYQMDVKSAFLNGYLNEEVYV Q KGF D HP HV++L K LYGLKQAPRAWY+RLT +L +GY
Subjt: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Query: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
G DKTLF+ + ++ L++AQIYVDDI+FGG S +++ +F+ MQSEFEMS+VGEL+ F GLQ+KQ D IF+SQ +YAKN+VKKFG+E A +KRTPA T
Subjt: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
Query: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
H+KL+ D G VD LYRS++GSLLYLTASRPDI YAV +CARYQ YV+ TSD+G+MY + LVGY DA+WAGS DDRKST
Subjt: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
Query: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
SGG F+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+ Q MTLYCDNMSAI+I KNPVQHSRTKHI IRHH+
Subjt: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
Query: ---------ILDIFTKPLDANSFEYLHAGLGVC
I DIFTK LDAN FE L LG+C
Subjt: ---------ILDIFTKPLDANSFEYLHAGLGVC
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| AAO73523.1 gag-pol polyprotein [Glycine max] | 8.2e-307 | 53.53 | Show/hide |
Query: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
++ TS++ +A + WY DSGCSRHM G + + N++ C T +VTFGDG+KGKII G + + LP + V+F C
Subjt: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
Query: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
+V N+++++ M G R +NCY W ++ S TC ++ ++ +WH+ G + +RG++KI+ A+ GIP+L + CG+CQIGKQ + +H+ L+
Subjt: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
Query: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
T++VLELLHMDLMG MQ ESL GKRY VVVDD+SR+TWV F++ K T E+ K L L+LQREK I +I+SDHG+EF++ F FC EGI HEFSA
Subjt: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
Query: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA NTAC+IHNRVT+R T TLYE+WK RK +VK+FH+FGS CYILADRE R+K D +S
Subjt: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
Query: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
GIFLGYS NSRAYRVFN+R +VM++INVV++DL A K +E+ N++DA ++ + S ++E + + S ++K HP IIGD
Subjt: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
Query: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
P+ G+ TR +E +++V + C++S IEP V AL DE+W+N MQEEL QF+RN VW L K +E +T+NK RLVAQGYT
Subjt: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
Query: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Q+EG+DFDETFAPVA+LE+IRLLLG++CI KFKLYQMDVKSAFLNGYLNEEVYV Q KGF D HP HV++L K LYGLKQAPRAWY+RLT +L +GY
Subjt: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Query: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
G DKTLF+ + ++ L++AQIYVDDI+FGG S +++ +F+ MQSEFEMS+VGEL+ F GLQ+KQ D IF+SQ +YAKN+VKKFG+E A +KRTPA T
Subjt: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
Query: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
H+KL+ D G VD K YRS++GSLLYLTASRPDI YAV +CARYQ YV+ TSD+G+MY ++ LVGY DA+WAGS DDRKST
Subjt: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
Query: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
SGG F+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+ Q MTLYCDNMSAI+I KNPVQHSRTKHI IRHH+
Subjt: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
Query: ---------ILDIFTKPLDANSFEYLHAGLGVC
I DIFTK LDAN FE L LG+C
Subjt: ---------ILDIFTKPLDANSFEYLHAGLGVC
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| AAO73525.1 gag-pol polyprotein [Glycine max] | 8.0e-302 | 53.05 | Show/hide |
Query: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
++ TS++ +A + WY DSGCSRHM G + + N++ C T +VTFGDG+KGKI G + + LP + V+F C
Subjt: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
Query: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
+V N+++++ M G R +NCY W ++ S TC ++ ++ +WH+ G + +RG++KII A+ GIP+L + CG+CQIGKQ + +H+ L+
Subjt: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
Query: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
T+ VLELLHMDLMG MQ ESL GKRY VVVDD+SR+TWV F++ K DT E+ K L L+LQREK I +I+SDHG+EF++ F FC EGI HEFSA
Subjt: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
Query: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
ITPQQNG+VERKNRTLQE RVM+HAK LP WAEA NTAC+IHNRVT+R T TLYE+WK RK VK+FH+FGS CYILADRE R+K D +S
Subjt: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
Query: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
GIFLGYS NSRAYRVFN+R +VM++INVV++DL A K +E+ N++D +++ +KS ++E + + P ++K P IIGD
Subjt: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
Query: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
P+ G+ TR +E +++V + C++S IEP V AL DE+W+N MQEEL QF+RN VW L K +E +T+NK RLVAQGYT
Subjt: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
Query: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Q+EG+DFDETFAPVA+LE+IRLLLG++CI KFKLYQMDVKSAFLNGYLNEE YV Q KGFVD H HV++L K LYGLKQAPRAWY+RLT +L +GY
Subjt: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Query: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
G DKTLF+ + ++ L++AQIYVDDI+FGG S +++ +F+ MQSEFEMS+VGEL F GLQ+KQ D IF+SQ KYAKN+VKKFG+E A +KRTPA T
Subjt: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
Query: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
H+KL+ D G VD LYRS++GSLLYLTASRPDI +AV +CARYQ YV+ TSD+G+MY + LVGY DA+WAGS DDRK T
Subjt: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
Query: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHFI----------
SGG F+LG NLISW SKKQNCVSLSTAEAEYIA GS C+ Q MTLYCDNMSAI+I KNPVQH+RTKHI IRHH+I
Subjt: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHFI----------
Query: ----------LDIFTKPLDANSFEYLHAGLGVC
DIFTK LDAN FE L LG C
Subjt: ----------LDIFTKPLDANSFEYLHAGLGVC
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| AAO73527.1 gag-pol polyprotein [Glycine max] | 3.7e-307 | 53.63 | Show/hide |
Query: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
++ TS++ +A + WY DSGCSRHM G + + N++ C T +VTFGDG+KGKII G + + LP + V+F C
Subjt: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
Query: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
+V N+++++ M G R +NCY W ++ S TC ++ ++ +WH+ G + +RG++KII A+ GIP+L + CG+CQIGKQ + +H+ L+
Subjt: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
Query: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
T++VLELLHMDLMG MQ ESL GKRY VVVDD+SR+TWV F++ K +T E+ K L L+LQREK I +I+SDHG+EF++ F FC EGI HEFSA
Subjt: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
Query: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA NTAC+IHNRVT+R T TLYE+WK RK +VK+FH+FGS CYILADRE R+K D +S
Subjt: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
Query: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEEDES--PNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
GIFLGYS NSRAYRVFN+R +VM++INVV++DL A K +E+ + N++DA ++ + S ++E + + S ++K HP IIGD
Subjt: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEEDES--PNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
Query: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
P+ G+ TR +E +++V + C++S IEP V AL DE+W+N MQEEL QF+RN VW L K +E +T+NK RLVAQGYT
Subjt: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
Query: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Q+EG+DFDETFAPVA+LE+IRLLLG++CI KFKLYQMDVKSAFLNGYLNEEVYV Q KGF D HP HV++L K LYGLKQAPRAWY+RLT +L +GY
Subjt: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Query: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
G DKTLF+ + ++ L++AQIYVDDI+FGG S +++ +F+ MQSEFEMS+VGEL+ F GLQ+KQ D IF+SQ +YAKN+VKKFG+E A +KRTPA T
Subjt: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
Query: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
H+KL+ D G VD LYRS++GSLLYLTASRPDI YAV +CARYQ YV+ TSD+G+MY + LVGY DA+WAGS DDRKST
Subjt: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
Query: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
SGG F+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+ Q MTLYCDNMSAI+I KNPVQHSRTKHI IRHH+
Subjt: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
Query: ---------ILDIFTKPLDANSFEYLHAGLGVC
I DIFTK LDAN FE L LG+C
Subjt: ---------ILDIFTKPLDANSFEYLHAGLGVC
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| AAO73529.1 gag-pol polyprotein [Glycine max] | 2.8e-307 | 53.73 | Show/hide |
Query: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
++ TS++ +A + WY DSGCSRHM G + + N++ C T +VTFGDG+KGKI G + LP + V+F C
Subjt: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
Query: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
+V N+++++ M G R +NCY W S+ S TC ++ ++ +WH+ G + +RG++KII A+ GIP+L + CG+CQIGKQ + +H+ L+
Subjt: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
Query: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
T++VLELLHMDLMG MQ ESL GKRY VVVDD+SR+TWV F++ K DT E+ K L L+LQREK I +I+SDHG+EF++ F FC EGI HEFSA
Subjt: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
Query: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA NTAC+IHNRVT+R T TLYE+WK RK VK+FH+FGS CYILADRE R+K D +S
Subjt: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
Query: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
GIFLGYS NSRAYRVFN+R +VM++INVV++DL A K +E+ N++D +++ + S ++E + + PS ++K HP IIGD
Subjt: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
Query: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
P+ G+ TR +E +++V + C++S IEP V AL DE+W+N MQEEL QF+RN VW L K +E +T+NK RLVAQGYT
Subjt: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
Query: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Q+EG+DFDETFAPVA+LE+IRLLLG++CI KFKLYQMDVKSAFLNGYLNEE YV Q KGFVD HP HV++L K LYGLKQAPRAWY+RLT +L +GY
Subjt: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Query: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
G DKTLF+ + ++ L++AQIYVDDI+FGG S +++ +F+ MQSEFEMS+VGEL+ F GLQ+KQ D IF+SQ KYAKN+VKKFG+E A +KRTPA T
Subjt: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
Query: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
H+KL+ D G VD LYRS++GSLLYLTASRPDI YAV +CARYQ YV+ TSD+G+MY + LVGY DA+WAGS DDRKST
Subjt: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
Query: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
SGG F+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+ Q MTLYCDNMSAI+I KNPVQHSRTKHI IRHH+
Subjt: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
Query: ---------ILDIFTKPLDANSFEYLHAGLGVC
I DIFTK LDA FE L LG+C
Subjt: ---------ILDIFTKPLDANSFEYLHAGLGVC
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| Q84VH6 Gag-pol polyprotein | 1.4e-307 | 53.73 | Show/hide |
Query: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
++ TS++ +A + WY DSGCSRHM G + + N++ C T +VTFGDG+KGKI G + LP + V+F C
Subjt: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
Query: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
+V N+++++ M G R +NCY W S+ S TC ++ ++ +WH+ G + +RG++KII A+ GIP+L + CG+CQIGKQ + +H+ L+
Subjt: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
Query: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
T++VLELLHMDLMG MQ ESL GKRY VVVDD+SR+TWV F++ K DT E+ K L L+LQREK I +I+SDHG+EF++ F FC EGI HEFSA
Subjt: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
Query: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA NTAC+IHNRVT+R T TLYE+WK RK VK+FH+FGS CYILADRE R+K D +S
Subjt: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
Query: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
GIFLGYS NSRAYRVFN+R +VM++INVV++DL A K +E+ N++D +++ + S ++E + + PS ++K HP IIGD
Subjt: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
Query: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
P+ G+ TR +E +++V + C++S IEP V AL DE+W+N MQEEL QF+RN VW L K +E +T+NK RLVAQGYT
Subjt: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
Query: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Q+EG+DFDETFAPVA+LE+IRLLLG++CI KFKLYQMDVKSAFLNGYLNEE YV Q KGFVD HP HV++L K LYGLKQAPRAWY+RLT +L +GY
Subjt: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Query: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
G DKTLF+ + ++ L++AQIYVDDI+FGG S +++ +F+ MQSEFEMS+VGEL+ F GLQ+KQ D IF+SQ KYAKN+VKKFG+E A +KRTPA T
Subjt: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
Query: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
H+KL+ D G VD LYRS++GSLLYLTASRPDI YAV +CARYQ YV+ TSD+G+MY + LVGY DA+WAGS DDRKST
Subjt: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
Query: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
SGG F+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+ Q MTLYCDNMSAI+I KNPVQHSRTKHI IRHH+
Subjt: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
Query: ---------ILDIFTKPLDANSFEYLHAGLGVC
I DIFTK LDA FE L LG+C
Subjt: ---------ILDIFTKPLDANSFEYLHAGLGVC
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| Q84VH8 Gag-pol polyprotein | 1.8e-307 | 53.63 | Show/hide |
Query: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
++ TS++ +A + WY DSGCSRHM G + + N++ C T +VTFGDG+KGKII G + + LP + V+F C
Subjt: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
Query: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
+V N+++++ M G R +NCY W ++ S TC ++ ++ +WH+ G + +RG++KII A+ GIP+L + CG+CQIGKQ + +H+ L+
Subjt: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
Query: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
T++VLELLHMDLMG MQ ESL GKRY VVVDD+SR+TWV F++ K +T E+ K L L+LQREK I +I+SDHG+EF++ F FC EGI HEFSA
Subjt: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
Query: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA NTAC+IHNRVT+R T TLYE+WK RK +VK+FH+FGS CYILADRE R+K D +S
Subjt: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
Query: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEEDES--PNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
GIFLGYS NSRAYRVFN+R +VM++INVV++DL A K +E+ + N++DA ++ + S ++E + + S ++K HP IIGD
Subjt: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEEDES--PNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
Query: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
P+ G+ TR +E +++V + C++S IEP V AL DE+W+N MQEEL QF+RN VW L K +E +T+NK RLVAQGYT
Subjt: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
Query: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Q+EG+DFDETFAPVA+LE+IRLLLG++CI KFKLYQMDVKSAFLNGYLNEEVYV Q KGF D HP HV++L K LYGLKQAPRAWY+RLT +L +GY
Subjt: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Query: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
G DKTLF+ + ++ L++AQIYVDDI+FGG S +++ +F+ MQSEFEMS+VGEL+ F GLQ+KQ D IF+SQ +YAKN+VKKFG+E A +KRTPA T
Subjt: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
Query: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
H+KL+ D G VD LYRS++GSLLYLTASRPDI YAV +CARYQ YV+ TSD+G+MY + LVGY DA+WAGS DDRKST
Subjt: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
Query: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
SGG F+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+ Q MTLYCDNMSAI+I KNPVQHSRTKHI IRHH+
Subjt: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
Query: ---------ILDIFTKPLDANSFEYLHAGLGVC
I DIFTK LDAN FE L LG+C
Subjt: ---------ILDIFTKPLDANSFEYLHAGLGVC
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| Q84VI0 Gag-pol polyprotein | 3.9e-302 | 53.05 | Show/hide |
Query: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
++ TS++ +A + WY DSGCSRHM G + + N++ C T +VTFGDG+KGKI G + + LP + V+F C
Subjt: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
Query: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
+V N+++++ M G R +NCY W ++ S TC ++ ++ +WH+ G + +RG++KII A+ GIP+L + CG+CQIGKQ + +H+ L+
Subjt: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
Query: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
T+ VLELLHMDLMG MQ ESL GKRY VVVDD+SR+TWV F++ K DT E+ K L L+LQREK I +I+SDHG+EF++ F FC EGI HEFSA
Subjt: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
Query: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
ITPQQNG+VERKNRTLQE RVM+HAK LP WAEA NTAC+IHNRVT+R T TLYE+WK RK VK+FH+FGS CYILADRE R+K D +S
Subjt: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
Query: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
GIFLGYS NSRAYRVFN+R +VM++INVV++DL A K +E+ N++D +++ +KS ++E + + P ++K P IIGD
Subjt: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
Query: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
P+ G+ TR +E +++V + C++S IEP V AL DE+W+N MQEEL QF+RN VW L K +E +T+NK RLVAQGYT
Subjt: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
Query: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Q+EG+DFDETFAPVA+LE+IRLLLG++CI KFKLYQMDVKSAFLNGYLNEE YV Q KGFVD H HV++L K LYGLKQAPRAWY+RLT +L +GY
Subjt: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Query: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
G DKTLF+ + ++ L++AQIYVDDI+FGG S +++ +F+ MQSEFEMS+VGEL F GLQ+KQ D IF+SQ KYAKN+VKKFG+E A +KRTPA T
Subjt: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
Query: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
H+KL+ D G VD LYRS++GSLLYLTASRPDI +AV +CARYQ YV+ TSD+G+MY + LVGY DA+WAGS DDRK T
Subjt: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
Query: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHFI----------
SGG F+LG NLISW SKKQNCVSLSTAEAEYIA GS C+ Q MTLYCDNMSAI+I KNPVQH+RTKHI IRHH+I
Subjt: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHFI----------
Query: ----------LDIFTKPLDANSFEYLHAGLGVC
DIFTK LDAN FE L LG C
Subjt: ----------LDIFTKPLDANSFEYLHAGLGVC
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| Q84VI2 Gag-pol polyprotein | 4.0e-307 | 53.53 | Show/hide |
Query: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
++ TS++ +A + WY DSGCSRHM G + + N++ C T +VTFGDG+KGKII G + + LP + V+F C
Subjt: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
Query: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
+V N+++++ M G R +NCY W ++ S TC ++ ++ +WH+ G + +RG++KI+ A+ GIP+L + CG+CQIGKQ + +H+ L+
Subjt: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
Query: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
T++VLELLHMDLMG MQ ESL GKRY VVVDD+SR+TWV F++ K T E+ K L L+LQREK I +I+SDHG+EF++ F FC EGI HEFSA
Subjt: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
Query: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA NTAC+IHNRVT+R T TLYE+WK RK +VK+FH+FGS CYILADRE R+K D +S
Subjt: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
Query: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
GIFLGYS NSRAYRVFN+R +VM++INVV++DL A K +E+ N++DA ++ + S ++E + + S ++K HP IIGD
Subjt: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
Query: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
P+ G+ TR +E +++V + C++S IEP V AL DE+W+N MQEEL QF+RN VW L K +E +T+NK RLVAQGYT
Subjt: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
Query: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Q+EG+DFDETFAPVA+LE+IRLLLG++CI KFKLYQMDVKSAFLNGYLNEEVYV Q KGF D HP HV++L K LYGLKQAPRAWY+RLT +L +GY
Subjt: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Query: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
G DKTLF+ + ++ L++AQIYVDDI+FGG S +++ +F+ MQSEFEMS+VGEL+ F GLQ+KQ D IF+SQ +YAKN+VKKFG+E A +KRTPA T
Subjt: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
Query: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
H+KL+ D G VD K YRS++GSLLYLTASRPDI YAV +CARYQ YV+ TSD+G+MY ++ LVGY DA+WAGS DDRKST
Subjt: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
Query: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
SGG F+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+ Q MTLYCDNMSAI+I KNPVQHSRTKHI IRHH+
Subjt: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
Query: ---------ILDIFTKPLDANSFEYLHAGLGVC
I DIFTK LDAN FE L LG+C
Subjt: ---------ILDIFTKPLDANSFEYLHAGLGVC
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| Q84VI4 Gag-pol polyprotein | 8.9e-307 | 53.53 | Show/hide |
Query: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
++ TS++ +A + WY DSGCSRHM G + + N++ C T +VTFGDG+KGKII G + + LP + V+F C
Subjt: MIAFTSVQ-TADDAWYFDSGCSRHMIGNRSYFTNLKDCVTGHVTFGDGAKGKIIAKGNIDKNNLPR------------------------YKVSFDDIGC
Query: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
+V N+++++ M G R +NCY W ++ S TC ++ ++ +WH+ G + +RG++KII A+ GIP+L + CG+CQIGKQ + +H+ L+
Subjt: VVMNKENQICMSGKRQTNNCYHW---NSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCY
Query: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
T++VLELLHMDLMG MQ ESL GKRY VVVDD+SR+TWV F++ K +T E+ K L L+LQREK I +I+SDHG+EF++ FC EGI HEFSA
Subjt: TNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAP
Query: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
ITPQQNG+VERKNRTLQE ARVM+HAK LP WAEA NTAC+IHNRVT+R T TLYE+WK RK +VK+FH+FGS CYILADRE R+K D +S
Subjt: ITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARS
Query: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
GIFLGYS NSRAYRVFN+R +VM++INVV++DL A K +E+ N++DA ++ + S ++E + + S ++K HP IIGD
Subjt: KQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVNDEE--DESPNMSDARTMSKSLKKS---SEEIITKKSELIPSAHVKKNHPASSIIGD
Query: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
P+ G+ TR +E +++V + C++S IEP V AL DE+W+N MQEEL QF+RN VW L K +E +T+NK RLVAQGYT
Subjt: PSAGMQTRRKEKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYT
Query: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Q+EG+DFDETFAPVA+LE+IRLLLG++CI KFKLYQMDVKSAFLNGYLNEEVYV Q KGF D HP HV++L K LYGLKQAPRAWY+RLT +L +GY
Subjt: QVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYS
Query: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
G DKTLF+ + ++ L++AQIYVDDI+FGG S +++ +F+ MQSEFEMS+VGEL+ F GLQ+KQ D IF+SQ +YAKN+VKKFG+E A +KRTPA T
Subjt: GGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAAT
Query: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
H+KL+ D G VD LYRS++GSLLYLTASRPDI YAV +CARYQ YV+ TSD+G+MY + LVGY DA+WAGS DDRKST
Subjt: HVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARYQ----------------YVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKST
Query: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
SGG F+LGNNLISW SKKQNCVSLSTAEAEYIA GS C+ Q MTLYCDNMSAI+I KNPVQHSRTKHI IRHH+
Subjt: SGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCT---------------QTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHF-----------
Query: ---------ILDIFTKPLDANSFEYLHAGLGVC
I DIFTK LDAN FE L LG+C
Subjt: ---------ILDIFTKPLDANSFEYLHAGLGVC
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.7e-90 | 26.8 | Show/hide |
Query: VTFGDGAKGKIIAKGNIDKNNLPRYKVSFDDIGCVVMNKENQICMSGKRQTNNCYHWNSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVG-
V F A G +++ + + + + FD G V ++K + + NN N + + N LWH+ G +S L +I +
Subjt: VTFGDGAKGKIIAKGNIDKNNLPRYKVSFDDIGCVVMNKENQICMSGKRQTNNCYHWNSNTSDTCQLTRSNQTWLWHKMLGRVSMRGLEKIIKNEAIVG-
Query: --IPDLDVNGKFFCGDCQIGKQTRSTHKSLK-KCYTNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKG
+ +L+++ + C C GKQ R K LK K + + L ++H D+ G + +L K Y ++ VD ++ Y +K K D + ++ K +
Subjt: --IPDLDVNGKFFCGDCQIGKQTRSTHKSLK-KCYTNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKG
Query: KKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIR--TRTIVTL
K++ + D+G+E+ S FC+ +GI + + P TPQ NGV ER RT+ E AR M+ L FW EA + TA ++ NR+ R + T
Subjt: KKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIR--TRTIVTL
Query: YELWKERKLNVKYFHVFGSTCYILADREYRQKWDARSKQGIFLGYSKNS-RAYRVFNNRF---------------GSVMKTINVVINDLDSA--------
YE+W +K +K+ VFG+T Y+ + + K+D +S + IF+GY N + + N +F +K V + D +
Subjt: YELWKERKLNVKYFHVFGSTCYILADREYRQKWDARSKQGIFLGYSKNS-RAYRVFNNRF---------------GSVMKTINVVINDLDSA--------
Query: ------------------IKHVNDEED----------------ESPN----------MSDARTMSK-----SLKKSSEEIITKKS---------ELIPSA
I+ + D ++ E PN + D++ +K S K+ ++ + + E +
Subjt: ------------------IKHVNDEED----------------ESPN----------MSDARTMSK-----SLKKSSEEIITKKS---------ELIPSA
Query: HVKK---NHPASS----IIGDPSAGMQTR-----RKEKIDYMKMVVDLCYISTIEPSTVDS-ALKDE--YWLNVMQEELLQFRRNNVWTL----------
H+K+ ++P + II S ++T+ +E K+V++ I P++ D +D+ W + EL + NN WT+
Subjt: HVKK---NHPASS----IIGDPSAGMQTR-----RKEKIDYMKMVVDLCYISTIEPSTVDS-ALKDE--YWLNVMQEELLQFRRNNVWTL----------
Query: --------KIDEARCVTKNKVRLVAQGYTQVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHK
K +E + K RLVA+G+TQ ID++ETFAPVA++ + R +L + K++QMDVK+AFLNG L EE+Y+ +G S + +V K
Subjt: --------KIDEARCVTKNKVRLVAQGYTQVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHK
Query: LNKTLYGLKQAPRAWYDRLTIYLRDKGYSGGKFDKTLFIHRKS--DQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKND
LNK +YGLKQA R W++ L++ + D+ ++I K ++ + +YVDD++ +NNF + +F M+ + E+ F G++I+ + D
Subjt: LNKTLYGLKQAPRAWYDRLTIYLRDKGYSGGKFDKTLFIHRKS--DQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKND
Query: DIFISQEKYAKNMVKKFGLEQARNKRTPAATHVK---LTTDTDGVEVDHKLYRSIVGSLLY-LTASRPDIAYAVEICARY----------------QYVH
I++SQ Y K ++ KF +E TP + + L +D D + RS++G L+Y + +RPD+ AV I +RY +Y+
Subjt: DIFISQEKYAKNMVKKFGLEQARNKRTPAATHVK---LTTDTDGVEVDHKLYRSIVGSLLY-LTASRPDIAYAVEICARY----------------QYVH
Query: ETSDFGMMYSCDTTL--TLVGYYDANWAGSVDDRKSTSGGRFFLGN-NLISWLSKKQNCVSLSTAEAEYIAIGSGC----------------TQTTMTLY
T D +++ + ++GY D++WAGS DRKST+G F + + NLI W +K+QN V+ S+ EAEY+A+ + + +Y
Subjt: ETSDFGMMYSCDTTL--TLVGYYDANWAGSVDDRKSTSGGRFFLGN-NLISWLSKKQNCVSLSTAEAEYIAIGSGC----------------TQTTMTLY
Query: CDNMSAIDILKNPVQHSRTKHIKIRHHF--------------------ILDIFTKPLDANSFEYLHAGLGV
DN I I NP H R KHI I++HF + DIFTKPL A F L LG+
Subjt: CDNMSAIDILKNPVQHSRTKHIKIRHHF--------------------ILDIFTKPLDANSFEYLHAGLGV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.4e-109 | 30.15 | Show/hide |
Query: LWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCYTNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFL
LWHK +G +S +GL+ + K I V C C GKQ R + ++ + N +L+L++ D+ G M+ ES+ G +Y + +DD SR WV L
Subjt: LWHKMLGRVSMRGLEKIIKNEAIVGIPDLDVNGKFFCGDCQIGKQTRSTHKSLKKCYTNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFL
Query: KGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQ
K K ++ + ++RE G+K+ +++SD+G E+ S F +C GI HE + P TPQ NGV ER NRT+ E R M+ LP FW EA
Subjt: KGKIDTVEICKNLCLKLQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQ
Query: NTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARSKQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVIN--------D
TAC++ NR +W ++++ + VFG + +E R K D +S IF+GY YR+++ V+++ +VV D
Subjt: NTACHIHNRVTIRTRTIVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARSKQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVIN--------D
Query: LDSAIKH-------VNDEEDESPNMSDARTMSKSLKKSSEEIITKKSELIPSAHVKKNHPASS------IIGDPSAGMQTRRKEKIDYMKMVVDLCYIST
+ +K+ +P +++ T S + + ++ E + + HP + +++RR +Y+ + D
Subjt: LDSAIKH-------VNDEEDESPNMSDARTMSKSLKKSSEEIITKKSELIPSAHVKKNHPASS------IIGDPSAGMQTRRKEKIDYMKMVVDLCYIST
Query: IEPSTVDSAL---KDEYWLNVMQEELLQFRRNN------------------VWTLKIDEARCVTKNKVRLVAQGYTQVEGIDFDETFAPVAQLEAIRLLL
EP ++ L + + MQEE+ ++N V+ LK D + + K RLV +G+ Q +GIDFDE F+PV ++ +IR +L
Subjt: IEPSTVDSAL---KDEYWLNVMQEELLQFRRNN------------------VWTLKIDEARCVTKNKVRLVAQGYTQVEGIDFDETFAPVAQLEAIRLLL
Query: GISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYSGGKFDKTLFIHRKSD-QLLVAQIY
++ ++ Q+DVK+AFL+G L EE+Y+ Q +GF + V KLNK+LYGLKQAPR WY + +++ + Y D ++ R S+ ++ +Y
Subjt: GISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYSGGKFDKTLFIHRKSD-QLLVAQIY
Query: VDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQI--KQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAATHVKLTTDTDGVEVDHK-----
VDD++ G + L+ + F+M +G G++I ++ + +++SQEKY + ++++F ++ A+ TP A H+KL+ V+ K
Subjt: VDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQI--KQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAATHVKLTTDTDGVEVDHK-----
Query: -LYRSIVGSLLY-LTASRPDIAYAVEICARY----------------QYVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKSTSGGRFFLGNNLISW
Y S VGSL+Y + +RPDIA+AV + +R+ +Y+ T+ + + + L GY DA+ AG +D+RKS++G F ISW
Subjt: -LYRSIVGSLLY-LTASRPDIAYAVEICARY----------------QYVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKSTSGGRFFLGNNLISW
Query: LSKKQNCVSLSTAEAEYIAIGS---------------GCTQTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHFILDI
SK Q CV+LST EAEYIA G Q +YCD+ SAID+ KN + H+RTKHI +R+H+I ++
Subjt: LSKKQNCVSLSTAEAEYIAIGS---------------GCTQTTMTLYCDNMSAIDILKNPVQHSRTKHIKIRHHFILDI
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.4e-27 | 29.43 | Show/hide |
Query: MDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYSGGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDL
MDV +AFLN ++E +YV Q GFV+ +P +V +L +YGLKQAP W + + L+ G+ + + L+ SD + +YVDD++ S +
Subjt: MDVKSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYSGGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDL
Query: VNNFINIMQSEFEMSMVGELSCFWGLQIKQ-KNDDIFISQEKYAKNMVKKFGLEQARNKRTPAATHVKLTTDTDGVEVDHKLYRSIVGSLLY-LTASRPD
+ + + M +G++ F GL I Q N DI +S + Y + + + +TP L T D Y+SIVG LL+ RPD
Subjt: VNNFINIMQSEFEMSMVGELSCFWGLQIKQ-KNDDIFISQEKYAKNMVKKFGLEQARNKRTPAATHVKLTTDTDGVEVDHKLYRSIVGSLLY-LTASRPD
Query: IAYAVEICARY----------------QYVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKSTSGGRFFLGNNLISWLSKK-QNCVSLSTAEAEYI
I+Y V + +R+ +Y++ T + Y + L L Y DA+ D ST G L ++W SKK + + + + EAEYI
Subjt: IAYAVEICARY----------------QYVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKSTSGGRFFLGNNLISWLSKK-QNCVSLSTAEAEYI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.0e-86 | 26.85 | Show/hide |
Query: NIDKNNLPRYK--------VSFDDIGCVVMNKENQICMSGKRQTNNCYHWNSNTSDTCQLTRSNQTWL----WHKMLGRVSMRGLEKIIKNEAIVGIPDL
NI KN + Y+ V F V + + + + + Y W +S L S + WH LG + L +I N + L
Subjt: NIDKNNLPRYK--------VSFDDIGCVVMNKENQICMSGKRQTNNCYHWNSNTSDTCQLTRSNQTWL----WHKMLGRVSMRGLEKIIKNEAIVGIPDL
Query: DVNGKFF-CGDCQIGKQTRSTHKSLKKCYTNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKI
+ + KF C DC I K + S + + LE ++ D+ S RY ++ VD ++RYTW+ LK K E L+ +I
Subjt: DVNGKFF-CGDCQIGKQTRSTHKSLKKCYTNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKIDTVEICKNLCLKLQREKGKKIIKI
Query: QSDHGKEFDS--EGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKE
SD+G EF + E F+ GI H S P TP+ NG+ ERK+R + E ++ ++P +W A A ++ NR+ + + ++
Subjt: QSDHGKEFDS--EGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRTIVTLYELWKE
Query: RKLNVKYFHVFGSTCYILADREYRQKWDARSKQGIFLGYSKNSRAY--------RVFNNR----------FGSVMKTIN---------------------
N VFG CY + K D +S+Q +FLGYS AY R++ +R F + + T++
Subjt: RKLNVKYFHVFGSTCYILADREYRQKWDARSKQGIFLGYSKNSRAY--------RVFNNR----------FGSVMKTIN---------------------
Query: -------------------------------VVINDLDSAIK------------------------------------HVNDEEDESPNM------SDAR
V ++LDS+ N+ +ESP+ + A+
Subjt: -------------------------------VVINDLDSAIK------------------------------------HVNDEEDESPNM------SDAR
Query: TMSKSLKKSSEEIITKKSELIPSAHVKKNHPASSIIGDPSA------GMQTRRKEKI--DYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFR
+ S S ++ + S PS + P + I+ + + M TR K I K + + + EP T ALKDE W N M E+
Subjt: TMSKSLKKSSEEIITKKSELIPSAHVKKNHPASSIIGDPSA------GMQTRRKEKI--DYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFR
Query: RNNVW-------------------TLKIDEARCVTKNKVRLVAQGYTQVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVY
N+ W T K + + + K RLVA+GY Q G+D+ ETF+PV + +IR++LG++ + + + Q+DV +AFL G L ++VY
Subjt: RNNVW-------------------TLKIDEARCVTKNKVRLVAQGYTQVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVY
Query: VAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYSGGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV
++Q GF+D + P +V KL K LYGLKQAPRAWY L YL G+ D +LF+ ++ ++ +YVDDI+ G L++N ++ + F +
Subjt: VAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYSGGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMV
Query: GELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAATHVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARY--------
EL F G++ K+ + +SQ +Y +++ + + A+ TP A KL+ + D YR IVGSL YL +RPDI+YAV +++
Subjt: GELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAATHVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARY--------
Query: --------QYVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKSTSGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSG-------CTQTT----
+Y+ T + G+ TL+L Y DA+WAG DD ST+G +LG++ ISW SKKQ V S+ EAEY ++ + C+ T
Subjt: --------QYVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKSTSGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSG-------CTQTT----
Query: -----MTLYCDNMSAIDILKNPVQHSRTKHIKIRHHFI--------------------LDIFTKPLDANSFEYLHAGLGV
+YCDN+ A + NPV HSR KHI I +HFI D TKPL +F+ + +GV
Subjt: -----MTLYCDNMSAIDILKNPVQHSRTKHIKIRHHFI--------------------LDIFTKPLDANSFEYLHAGLGV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.5e-89 | 26.87 | Show/hide |
Query: KIIAKGNIDKN--------NLPRYKVSFDDIGCVVMNKENQICMSGKRQTNNCYHWNSNTSDTCQLTRSNQTWL----WHKMLGRVSMRGLEKIIKNEAI
K++ NI KN N R V F V + + + + + Y W +S + S + WH LG S+ L +I N +
Subjt: KIIAKGNIDKN--------NLPRYKVSFDDIGCVVMNKENQICMSGKRQTNNCYHWNSNTSDTCQLTRSNQTWL----WHKMLGRVSMRGLEKIIKNEAI
Query: VGIPDLDVNGKFF-CGDCQIGKQTRSTHK---SLKKCYTNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKI---DTVEICKNLCLK
+P L+ + K C DC I K +HK S ++K LE ++ D+ S+ RY ++ VD ++RYTW+ LK K DT I K+L
Subjt: VGIPDLDVNGKFF-CGDCQIGKQTRSTHK---SLKKCYTNKVLELLHMDLMGQMQTESLRGKRYVLVVVDDYSRYTWVCFLKGKI---DTVEICKNLCLK
Query: LQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRT
++ +I + SD+G EF + GI H S P TP+ NG+ ERK+R + EM ++ ++P +W A + A ++ NR+
Subjt: LQREKGKKIIKIQSDHGKEFDSEGFNSFCLLEGIHHEFSAPITPQQNGVVERKNRTLQEMARVMIHAKNLPLCFWAEAKISGLQNTACHIHNRVTIRTRT
Query: IVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARSKQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVN--------DEEDESP
+ + ++ + N + VFG CY R K + +SKQ F+GYS AY + G + + +V ++ N D +P
Subjt: IVTLYELWKERKLNVKYFHVFGSTCYILADREYRQKWDARSKQGIFLGYSKNSRAYRVFNNRFGSVMKTINVVINDLDSAIKHVN--------DEEDESP
Query: N-----------------------------------------MSDARTMSKSLKKSSEEIITKKS-----------------------------------
N +S + S S+ S T S
Subjt: N-----------------------------------------MSDARTMSKSLKKSSEEIITKKS-----------------------------------
Query: ---------ELIPSAHV--------KKNHPASSIIGDP---------------------SAGMQTRRKEKI--DYMKMVVDLCYISTIEPSTVDSALKDE
I S H+ + N P+SS P + M TR K+ I K + EP T A+KD+
Subjt: ---------ELIPSAHV--------KKNHPASSIIGDP---------------------SAGMQTRRKEKI--DYMKMVVDLCYISTIEPSTVDSALKDE
Query: YWLNVMQEELLQFRRNNVW-------------------TLKIDEARCVTKNKVRLVAQGYTQVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDV
W M E+ N+ W T K + + + K RLVA+GY Q G+D+ ETF+PV + +IR++LG++ + + + Q+DV
Subjt: YWLNVMQEELLQFRRNNVW-------------------TLKIDEARCVTKNKVRLVAQGYTQVEGIDFDETFAPVAQLEAIRLLLGISCIQKFKLYQMDV
Query: KSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYSGGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNN
+AFL G L +EVY++Q GFVD + P +V +L K +YGLKQAPRAWY L YL G+ D +LF+ ++ ++ +YVDDI+ G L+ +
Subjt: KSAFLNGYLNEEVYVAQLKGFVDSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYSGGKFDKTLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNN
Query: FINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAATHVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAV
++ + F + +L F G++ K+ + +SQ +Y +++ + + A+ TP AT KLT + D YR IVGSL YL +RPD++YAV
Subjt: FINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAATHVKLTTDTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAV
Query: EICARY----------------QYVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKSTSGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSG--
++Y +Y+ T D G+ TL+L Y DA+WAG DD ST+G +LG++ ISW SKKQ V S+ EAEY ++ +
Subjt: EICARY----------------QYVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKSTSGGRFFLGNNLISWLSKKQNCVSLSTAEAEYIAIGSG--
Query: -----CTQTT---------MTLYCDNMSAIDILKNPVQHSRTKHIKIRHHFI--------------------LDIFTKPLDANSFEYLHAGLGV
C+ T +YCDN+ A + NPV HSR KHI + +HFI D TKPL +F+ +GV
Subjt: -----CTQTT---------MTLYCDNMSAIDILKNPVQHSRTKHIKIRHHFI--------------------LDIFTKPLDANSFEYLHAGLGV
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.8e-65 | 33.74 | Show/hide |
Query: EKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVW------------------TLKIDEARCVTKNKVRLVAQGYTQVEGIDFDET
EK+ + +C EPST + A + W M +E+ + W +K + + + K RLVA+GYTQ EGIDF ET
Subjt: EKIDYMKMVVDLCYISTIEPSTVDSALKDEYWLNVMQEELLQFRRNNVW------------------TLKIDEARCVTKNKVRLVAQGYTQVEGIDFDET
Query: FAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFV----DSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYSGGKFDK
F+PV +L +++L+L IS I F L+Q+D+ +AFLNG L+EE+Y+ G+ DS P V L K++YGLKQA R W+ + ++ L G+ D
Subjt: FAPVAQLEAIRLLLGISCIQKFKLYQMDVKSAFLNGYLNEEVYVAQLKGFV----DSEHPKHVHKLNKTLYGLKQAPRAWYDRLTIYLRDKGYSGGKFDK
Query: TLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAATHVKLTT
T F+ + L +YVDDII + V+ + ++S F++ +G L F GL+I + I I Q KYA +++ + GL + P V +
Subjt: TLFIHRKSDQLLVAQIYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAATHVKLTT
Query: DTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARY----------------QYVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKSTSGGRFF
+ G VD K YR ++G L+YL +R DI++AV +++ Y+ T G+ YS + L + DA++ D R+ST+G F
Subjt: DTDGVEVDHKLYRSIVGSLLYLTASRPDIAYAVEICARY----------------QYVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKSTSGGRFF
Query: LGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCTQTTM-----------------TLYCDNMSAIDILKNPVQHSRTKHIKIRHHFI
LG +LISW SKKQ VS S+AEAEY A+ S T M L+CDN +AI I N V H RTKHI+ H +
Subjt: LGNNLISWLSKKQNCVSLSTAEAEYIAIGSGCTQTTM-----------------TLYCDNMSAIDILKNPVQHSRTKHIKIRHHFI
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 1.1e-27 | 35.75 | Show/hide |
Query: IYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAATHVKLTTDTDGVEVDHKLYRSI
+YVDDI+ G S L+N I + S F M +G + F G+QIK +F+SQ KYA+ ++ G+ + TP + + T D +RSI
Subjt: IYVDDIIFGGFSQDLVNNFINIMQSEFEMSMVGELSCFWGLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRTPAATHVKLTTDTDGVEVDHKLYRSI
Query: VGSLLYLTASRPDIAYAVEI-CAR---------------YQYVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKSTSGGRFFLGNNLISWLSKKQNC
VG+L YLT +RPDI+YAV I C R +YV T G+ ++ L + + D++WAG R+ST+G FLG N+ISW +K+Q
Subjt: VGSLLYLTASRPDIAYAVEI-CAR---------------YQYVHETSDFGMMYSCDTTLTLVGYYDANWAGSVDDRKSTSGGRFFLGNNLISWLSKKQNC
Query: VSLSTAEAEYIAIGSGCTQTT
VS S+ E EY A+ + T
Subjt: VSLSTAEAEYIAIGSGCTQTT
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 6.2e-10 | 35.2 | Show/hide |
Query: MQTRRKEKIDYMKMVVDLCYISTI--EPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYTQV
M TR K I+ + L +TI EP +V ALKD W MQEEL RN W L K+ + + K RLVA+G+ Q
Subjt: MQTRRKEKIDYMKMVVDLCYISTI--EPSTVDSALKDEYWLNVMQEELLQFRRNNVWTL------------------KIDEARCVTKNKVRLVAQGYTQV
Query: EGIDFDETFAPVAQLEAIRLLLGIS
EGI F ET++PV + IR +L ++
Subjt: EGIDFDETFAPVAQLEAIRLLLGIS
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