; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0010944 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0010944
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRibosome hibernation promotion factor
Genome locationchr11:38745..43173
RNA-Seq ExpressionPay0010944
SyntenyPay0010944
Gene Ontology termsGO:0045900 - negative regulation of translational elongation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0043022 - ribosome binding (molecular function)
GO:0043024 - ribosomal small subunit binding (molecular function)
InterPro domainsIPR003489 - Ribosome hibernation promoting factor/RaiA
IPR032528 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal
IPR034694 - Ribosome hibernation promoting factor, long/plastid
IPR036567 - Ribosome hibernation promotion factor-like
IPR038416 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147328.1 ribosome-binding factor PSRP1, chloroplastic [Cucumis sativus]3.3e-16197.42Show/hide
Query:  MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE
        MATLTSSMQANLLSDHSLSPP  SSSTVSYFPA FSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDG LSSVKLIVQGKNLE
Subjt:  MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
        LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCE TLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
Subjt:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF

Query:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
        DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVT+
Subjt:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV

Query:  EAAREPSLAE
        EA REPSLAE
Subjt:  EAAREPSLAE

XP_008460813.1 PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis melo]4.5e-16699.35Show/hide
Query:  MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE
        MATLTSSMQANLLSDHSL PPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE
Subjt:  MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
        LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCE TLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
Subjt:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF

Query:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
        DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
Subjt:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV

Query:  EAAREPSLAE
        EAAREPSLAE
Subjt:  EAAREPSLAE

XP_022922607.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata]8.2e-13684.54Show/hide
Query:  MATLTSSMQANLLSDHSLSP--PHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLI
        MA LTSSMQ NLLS HSL+P     SSSTVS FP  FSL    + + LK HALSS+ASAFFNSC + F TI  A R RHA+ SFSIRM+WDG LSSVKLI
Subjt:  MATLTSSMQANLLSDHSLSP--PHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLI

Query:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDR
        VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCE TLFTKKHGVVRAEEDAETV+ASIDLVSSI+QRKLRKIKEKDSD 
Subjt:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDR

Query:  GRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAE
        GRH+KGFDRSK+REPAPIVVEDEEEEV QEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AE
Subjt:  GRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAE

Query:  KLEPVTVEAAREPSLAE
        K+E VTVE ARE SLAE
Subjt:  KLEPVTVEAAREPSLAE

XP_023551717.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita pepo subsp. pepo]3.3e-13784.76Show/hide
Query:  MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQ
        MA LTSSMQ NLLS HSL+P   SS+TVS FP  FSL    + + LK+HALSS+ASAFFNSC + F TI  A R RHA+ SFSIRM+WDG LSSVKLIVQ
Subjt:  MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQ

Query:  GKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGR
        GKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCE TLFTKKHGVVRAEEDAETV+ASIDLVSSI+QRKLRKIKEKDSD GR
Subjt:  GKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGR

Query:  HVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKL
        H+KGFDRSK+REPAPIVVEDEEEEV QEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AEK+
Subjt:  HVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKL

Query:  EPVTVEAAREPSLAE
        E VTVE ARE SLAE
Subjt:  EPVTVEAAREPSLAE

XP_038900446.1 ribosome-binding factor PSRP1, chloroplastic [Benincasa hispida]5.3e-14388.18Show/hide
Query:  MATLTSSMQANLLSDHSL-SPPHPSSSTVSYFPAPFSLHFSALKVHAL--SSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGK
        MA LTSSM  +LL DHSL S    SSST+S+FPA FSLHFSALKVHAL  SS ASAFFNSCK+F T ETASRNRHASNSF++RM+WDG LSSVKLIVQ K
Subjt:  MATLTSSMQANLLSDHSL-SPPHPSSSTVSYFPAPFSLHFSALKVHAL--SSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGK

Query:  NLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHV
        NLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCE TLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEKDSDRGRH+
Subjt:  NLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHV

Query:  KGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEP
        KGFDRSKVREPAPIVVEDE+EEVF+ED GEVIDEIVR KYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEKLE 
Subjt:  KGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEP

Query:  VTVEAAREPSLAE
        VT++AAREPSLAE
Subjt:  VTVEAAREPSLAE

TrEMBL top hitse value%identityAlignment
A0A1S3CCT7 ribosome-binding factor PSRP1, chloroplastic2.2e-16699.35Show/hide
Query:  MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE
        MATLTSSMQANLLSDHSL PPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE
Subjt:  MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
        LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCE TLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
Subjt:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF

Query:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
        DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
Subjt:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV

Query:  EAAREPSLAE
        EAAREPSLAE
Subjt:  EAAREPSLAE

A0A5D3BQR1 Ribosome-binding factor PSRP12.2e-16699.35Show/hide
Query:  MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE
        MATLTSSMQANLLSDHSL PPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE
Subjt:  MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLE

Query:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
        LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCE TLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF
Subjt:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF

Query:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
        DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV
Subjt:  DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTV

Query:  EAAREPSLAE
        EAAREPSLAE
Subjt:  EAAREPSLAE

A0A6J1CJG5 ribosome-binding factor PSRP1, chloroplastic3.4e-13585.13Show/hide
Query:  MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQG
        MATLTSSM  NLLS  S      SSST S FPA FSL    + SALK+H LSS+ S FFNSC  F TI+ A RNRHA+NSF+IRM+WDG LSSVKLIVQG
Subjt:  MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQG

Query:  KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRH
        KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCE TLFTKKHGVVR EEDAETV+ASIDLVSSIIQRKLRKIKEKDSDRGRH
Subjt:  KNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRH

Query:  VKGFDRSKVREPAPIVVED--EEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEK
        +KGFDR KVREPAPIVVED  EEEEV  ED GEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK
Subjt:  VKGFDRSKVREPAPIVVED--EEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEK

Query:  LEPVTVEAAREPSLAE
        LEPVTVE AREPSLAE
Subjt:  LEPVTVEAAREPSLAE

A0A6J1E3S3 ribosome-binding factor PSRP1, chloroplastic4.0e-13684.54Show/hide
Query:  MATLTSSMQANLLSDHSLSP--PHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLI
        MA LTSSMQ NLLS HSL+P     SSSTVS FP  FSL    + + LK HALSS+ASAFFNSC + F TI  A R RHA+ SFSIRM+WDG LSSVKLI
Subjt:  MATLTSSMQANLLSDHSLSP--PHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLI

Query:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDR
        VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCE TLFTKKHGVVRAEEDAETV+ASIDLVSSI+QRKLRKIKEKDSD 
Subjt:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDR

Query:  GRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAE
        GRH+KGFDRSK+REPAPIVVEDEEEEV QEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKE+G AE
Subjt:  GRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAE

Query:  KLEPVTVEAAREPSLAE
        K+E VTVE ARE SLAE
Subjt:  KLEPVTVEAAREPSLAE

A0A6J1J523 ribosome-binding factor PSRP1, chloroplastic8.6e-13183.99Show/hide
Query:  ANLLSDHSLSPPHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEA
        A+L    S S    SSSTVS FP  FSL    + + LK+HALSS+ASAFFNSC + F TI  A R RHA+ SFSIRM+WDG LSSVKLIVQGKNLELTEA
Subjt:  ANLLSDHSLSPPHPSSSTVSYFPAPFSL----HFSALKVHALSSNASAFFNSCKN-FGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEA

Query:  VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSK
        VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKG RIRRCE TLFTKKHGVVRAEEDAETV+ASIDLVSSI+QRKLRKIKEKDSD GRH+KGFDRSK
Subjt:  VKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSK

Query:  VREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAR
        +REPAPIVVEDEEEEV QEDGGE IDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENG AEK+E VTVE AR
Subjt:  VREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAR

Query:  EPSLAE
        E SLAE
Subjt:  EPSLAE

SwissProt top hitse value%identityAlignment
P19954 Ribosome-binding factor PSRP1, chloroplastic7.3e-8762.13Show/hide
Query:  LSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRR
        LSS  S F NSC     +   S     +    + M+WDG LSSVKLI+QG+NLE+++ V+ HVE+KVGK+V KHSHLVREVDVRLS RGG+  KG ++RR
Subjt:  LSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRR

Query:  CEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEE--EEV------FQEDGGEVIDEIVRTKYF
        CE TLFTK+HGV+RAEEDAE++++SIDLVSSIIQRKLRKIK+K SD GRH+KGF+RSKVR+P P+ +  EE  EEV         +  + I+E+VRTKYF
Subjt:  CEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEE--EEV------FQEDGGEVIDEIVRTKYF

Query:  DMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAREPSLAE
        DMPPLT+ EA+EQL+N+DHDFY FRNEETG+INILYKRK+GGYGLIIPK+ G  EKLE + V+  ++PS AE
Subjt:  DMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAREPSLAE

P47908 Ribosome hibernation promotion factor1.3e-3039.9Show/hide
Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEK
        +KL++QG N+ +TE++  +VE K+ KA +       +VDV LSV      +     + E T++     V+RA+E +E ++ASIDLVS  I R+LRK KEK
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEK

Query:  DSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK
        +  +  HV    + K  E  P   +   + +  +   E+  E+VR KYF MPP+T++EA+EQL+ +DHDFY F N++T  IN++Y R  GGYG+I P+
Subjt:  DSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK

P47995 Ribosome hibernation promotion factor6.5e-1931.5Show/hide
Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEK
        ++  + G NL +T+A++ ++E+KVGK ++++   V  V+  + V+           + E T+       +RAEE  + ++A IDL+++ ++R++RK K +
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEK

Query:  DSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKEN
         + + R      +    EP P   E   E     D  + I EI+R+K F + P+  EEA+ Q+  + HDF+ F + ET   +I+Y+RKDG YGLI   EN
Subjt:  DSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKEN

P74518 Ribosome hibernation promotion factor1.2e-3342.36Show/hide
Query:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRI---RRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKI
        +KL++QG N+ +TEA+  +VEEKV +AV+   +L  +VDV LSV      +  RI    + E T++     V+RA+E +E ++ASIDLV+  I R+LRK 
Subjt:  VKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRI---RRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKI

Query:  KEKDSDRGR-HVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLII
        KE+  D+   +VK    S++ E  P+     EE +  +   E+  E++R KYF MPP+ +E+A+EQL+ +DHDFY FRN++T EIN++Y R  GGYG+I 
Subjt:  KEKDSDRGR-HVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLII

Query:  PKE
        P +
Subjt:  PKE

Q9RVE7 Ribosome hibernation promotion factor6.5e-1932.47Show/hide
Query:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKE---KD
        + G+N+E+TE ++++VEEK+ + + +++  + +  V L+VR  +    +R  R E  L     G++RAEE    ++A+ID  S +++R+LRK K    K 
Subjt:  VQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKE---KD

Query:  SDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI
           GR         +  PA   V  +      +D  E   EIVR K F++ P++ E+A+ Q++ + HDFY F++ + G+  ++Y+R+DG YGLI
Subjt:  SDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLI

Arabidopsis top hitse value%identityAlignment
AT5G24490.1 30S ribosomal protein, putative8.3e-9470.97Show/hide
Query:  RNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETV
        R+ +  +S +++M+WDG L+SVKLI+QGKNLEL+E +K+HVEEKVGK+VQKHSHLVREVDVRLSVRGGEFGKG RIRRCE TLFTKKHGVVRAEEDAETV
Subjt:  RNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETV

Query:  FASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPA-PIVVEDEEEEV-----FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGF
        +A IDLVS+IIQRKLRKIKEKDSD GRH+KGF+R KVREP    VVED E+        +E+  ++I EIVRTK F+MPPLTV EA+EQL+ + HDFYGF
Subjt:  FASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPA-PIVVEDEEEEV-----FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGF

Query:  RNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAREPSLAE
        +NEETGEINI+YKRK+GGYGLIIPK++G AEK+EP+  E   E S AE
Subjt:  RNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAREPSLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTCTCACCTCTTCCATGCAGGCCAATCTTCTTTCTGATCACTCCTTATCTCCTCCTCACCCTTCTTCTTCTACCGTTTCTTACTTTCCCGCTCCCTTCTCTCT
TCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTCCAATGCTTCTGCTTTCTTCAACTCTTGCAAGAACTTTGGAACCATTGAGACTGCATCCCGTAACCGTCATGCCT
CAAACTCTTTCAGTATTCGGATGACCTGGGACGGCCACCTCTCCTCTGTTAAATTAATTGTCCAAGGCAAAAATTTGGAGTTGACTGAAGCAGTTAAGAAGCACGTGGAA
GAGAAGGTGGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTTAGAGAAGTAGATGTCAGACTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCAAAGGATTAGAAGATG
CGAGGCTACTTTATTCACGAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCTGAGACCGTCTTTGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGA
GAAAGATTAAAGAGAAAGATTCTGACCGTGGCCGACATGTGAAAGGATTTGACAGATCAAAAGTAAGAGAACCTGCACCCATAGTAGTTGAAGATGAGGAAGAGGAAGTT
TTTCAGGAAGATGGTGGAGAAGTTATTGACGAGATTGTTCGGACAAAATACTTTGATATGCCACCTTTGACAGTTGAAGAAGCAATCGAACAACTCAAGAATATTGACCA
TGATTTCTATGGTTTCCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCACAGCTGAGA
AATTAGAGCCTGTGACAGTTGAAGCAGCGAGAGAACCATCCTTGGCGGAATGA
mRNA sequenceShow/hide mRNA sequence
AAGTTACATACCCTCTTGCTTAAAAAAAAAAGTTACATACCCTCTTGCTTAAAAAAAAAAAGTTATATACCCTCTTTGACAAATATCAAAGGAGAAAAAGACAAAAACTG
ACATTGGCTTCCCATCATCCAGAGAAAAGAAAGAAAAGCCGCGCGGGTTGTTTATCCACTTGTTTCCCTTATTATCCTCATCGATTCCAAGTTTTGAACTCAACAATGGC
GACTCTCACCTCTTCCATGCAGGCCAATCTTCTTTCTGATCACTCCTTATCTCCTCCTCACCCTTCTTCTTCTACCGTTTCTTACTTTCCCGCTCCCTTCTCTCTTCACT
TCTCTGCGCTCAAAGTTCATGCTCTTTCTTCCAATGCTTCTGCTTTCTTCAACTCTTGCAAGAACTTTGGAACCATTGAGACTGCATCCCGTAACCGTCATGCCTCAAAC
TCTTTCAGTATTCGGATGACCTGGGACGGCCACCTCTCCTCTGTTAAATTAATTGTCCAAGGCAAAAATTTGGAGTTGACTGAAGCAGTTAAGAAGCACGTGGAAGAGAA
GGTGGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTTAGAGAAGTAGATGTCAGACTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCAAAGGATTAGAAGATGCGAGG
CTACTTTATTCACGAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCTGAGACCGTCTTTGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGAGAAAG
ATTAAAGAGAAAGATTCTGACCGTGGCCGACATGTGAAAGGATTTGACAGATCAAAAGTAAGAGAACCTGCACCCATAGTAGTTGAAGATGAGGAAGAGGAAGTTTTTCA
GGAAGATGGTGGAGAAGTTATTGACGAGATTGTTCGGACAAAATACTTTGATATGCCACCTTTGACAGTTGAAGAAGCAATCGAACAACTCAAGAATATTGACCATGATT
TCTATGGTTTCCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCACAGCTGAGAAATTA
GAGCCTGTGACAGTTGAAGCAGCGAGAGAACCATCCTTGGCGGAATGATGGGCCTTGGCGGAATGATGGGAATTGACGGAGGAAGTTTCACGTTCAGGATAGTTTACCAC
TGTTACCTTTGCTTAAAACTTCAAAACTTCAACTTCAACATGCATCTGAAGGCGTTTCTTGTAGAGTATATAGATTTAGATTTGAGGCTATTTGGTGATGAAGATAATAT
TGGAACAAGAAATGAGTAATAAGTAAAATAAGATGCAAAATATTCTAACGAATGAATGATTCAGCTTGCTGGGGTGTTACCATGAAAGTATATTCTAATGAAGAAATGAT
TCAACATTCATCTGAAATCTATTACCATCAACGGCCAGAAACCAAAAACTGACGAGGATCACCCCTAGTTTCTTAGTTATTATGAGATAATTTTCAAAAACAAAAGTTAT
TATTTTTATATTTGTTTTAGTTTTCAAAATATGTATTGTTAAACGAGAAATGTTGAATCATAGAAATTAAGATTATTTCTGTTTTGACTAATTAAAAGTTGTATGTATCT
TGAATGAAAATTGAAGTAATAAATTGATAAATTTTAGTGAAAATTATATTGA
Protein sequenceShow/hide protein sequence
MATLTSSMQANLLSDHSLSPPHPSSSTVSYFPAPFSLHFSALKVHALSSNASAFFNSCKNFGTIETASRNRHASNSFSIRMTWDGHLSSVKLIVQGKNLELTEAVKKHVE
EKVGKAVQKHSHLVREVDVRLSVRGGEFGKGQRIRRCEATLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEV
FQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGTAEKLEPVTVEAAREPSLAE