| GenBank top hits | e value | %identity | Alignment |
|---|
| ASY96752.1 RNA polymerase beta'' subunit [Cucumis melo var. momordica] | 0.0e+00 | 82.86 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
MAE ADLVFHNKVIDGTAIK LISRLIDHFGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIEIWYATS YLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
GYL RRL+ VVQ I+VRRTDCG+IRGI VSPGNRMIPE IFIQ LIGRVLADDIYMGPRCIG+RNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Query: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG NLVHPTRTRHG
Subjt: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
Query: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
R T+TLN KERVRKHI SDSEGEMHWSTDVYHAPEFTYSNVHLLPK SHLWILSGGSCGCS+VPFS YKDQDQI
Subjt: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
Query: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
VHSLCVERRYISSLSVNN+KVGQKF GPDLSGKNESGIP YSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQF SL+EREKELRPPSGISI I
Subjt: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
Query: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE NS+IGVATRLTLSI
Subjt: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
Query: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
RSRVGGLVR WITPTKKK FVFVRPVIIYELADGINLVKLFPQDL
Subjt: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
Query: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
LQERDNLELRVVNYILYGNGKPIRGI GTS++ VRTCL LNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Subjt: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Query: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKE QSL ILSASN LQMDLFND DPLI IRNSLGPLGAAPQIVNF SFYDLIT
Subjt: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
Query: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
HNPISLTKYLQLDNLKQT +VLKYYLMDENGGIFNSDPCS IVFNT NLNWHFLHHN HNNYCEE P TRISLG FFFENVCIAKNRPHLKSGQI+IVE
Subjt: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
Query: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
VDSVVIR AKPYLATSGAT+HRHYGE+LYEG+TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Subjt: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Query: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
QSRISLVNKIQKV RSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAER GRALEEAICYRAVLLGI KASLNTQSFISEASFQETAR
Subjt: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
Query: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
VLAKAALRGRIDWLRGLKEN+VLGGMIPVGTGFRELAH SRQ NIPLE P KK G+
Subjt: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
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| Q4VZP3.1 RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName: Full=PEP; AltName: Full=Plastid-encoded RNA polymerase subunit beta''; Short=RNA polymerase subunit beta'' [Cucumis sativus] | 0.0e+00 | 82.24 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
MAE ADLVFHNKVIDGTAIK LISRLIDHFGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIEIWYATS YLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
GYL RRL+ VVQ I+VRRTDCG+IRGI VSPGNRMIPE IFIQ LIGRVLADDIYMGPRCIG+RNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Query: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG +LVHPTRTRHG
Subjt: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
Query: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
R T+TLN KERVRKHI SDSEGEMHWSTDVYHAPEFTYSNVHLLPK SHLWILSGGSCGCSLVPFS YKDQDQI
Subjt: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
Query: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
VHSLCVERRYISSLSVNN+KVGQKF GPDLSGKNE+GIP YSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQF SL+EREKELRPPSGISI I
Subjt: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
Query: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
PING+FRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE NS+IGVATRLTLSI
Subjt: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
Query: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
RSRVGGLVR WITPTKKK FVFVRPVIIYELADGINLVKLFPQDL
Subjt: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
Query: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
LQERDNLELRV NYILYGNGKPIRGI GTS++ VRTCL LNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAY+RKRKDPSGSGLIFNNES
Subjt: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Query: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
DRTNINPFFSIYSKTRVPQSPSQNQGTIRTL NRNKE QSL ILSASN LQ+DLFND DPLI IRNSLGPLGAAPQIVNF SFY LIT
Subjt: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
Query: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILIVEVD
HNPISLTKYLQLDNLKQ +VLKYYLMDENGGI NSDPC IVFNT NLNWHFLH N HNNYCEE PTRISLGQFFFENVCIAKNRPHLKSGQI+IV+VD
Subjt: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILIVEVD
Query: SVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIVQS
S+VIRSAKPYLATSGAT+HRHYGEILYEG+TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSISMSLEKRIEGWNERITRILGIPWGFLIG+ELTIVQS
Subjt: SVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIVQS
Query: RISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETARVL
RISLVNKIQKV RSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAER GRALEEAICYRAVLLGI KASLNTQSFISEASFQETARVL
Subjt: RISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETARVL
Query: AKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
AKAALRGRIDWLRGLKEN+VLGGMIPVGTGFRELAH SRQ NIPLETP KK G+
Subjt: AKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
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| QJF46373.1 RNA polymerase beta'' subunit [Cucumis melo] | 0.0e+00 | 82.93 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
MAE ADLVFHNKVIDGTAIK LISRLIDHFGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIEIWYATS YLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
GYL RRL+ VVQ I+VRRTDCG+IRGI VSPGNRMIPE IFIQ LIGRVLADDIYMGPRCIG+RNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Query: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG NLVHPTRTRHG
Subjt: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
Query: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
R T+TLN KERVRKHI SDSEGEMHWSTDVYHAPEFTYSNVHLLPK SHLWILSGGSCGCS+VPFS YKDQDQI
Subjt: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
Query: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
VHSLCVERRYISSLSVNN+KVGQKF GPDLSGKNESGIP YSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQF SL+EREKELRPPSGISI I
Subjt: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
Query: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE NS+IGVATRLTLSI
Subjt: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
Query: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
RSRVGGLVR WITPTKKK FVFVRPVIIYELADGINLVKLFPQDL
Subjt: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
Query: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
LQERDNLELRVVNYILYGNGKPIRGI GTS++ VRTCL LNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Subjt: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Query: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKE QSL ILSASN LQMDLFND DPLI IRNSLGPLGAAPQIVNF SFYDLIT
Subjt: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
Query: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
HNPISLTKYLQLDNLKQT +VLKYYLMDENGGIFNSDPCS IVFNT NLNWHFLHHN HNNYCEE P TRISLG FFFENVCIAKNRPHLKSGQI+IVE
Subjt: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
Query: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
VDSVVIRSAKPYLATSGAT+HRHYGE+LYEG+TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Subjt: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Query: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
QSRISLVNKIQKV RSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAER GRALEEAICYRAVLLGI KASLNTQSFISEASFQETAR
Subjt: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
Query: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
VLAKAALRGRIDWLRGLKEN+VLGGMIPVGTGFRELAH SRQ NIPLE P KK G+
Subjt: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
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| YP_004841773.1 RNA polymerase beta'' subunit [Cucumis melo subsp. melo] | 0.0e+00 | 82.93 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
MAE ADLVFHNKVIDGTAIK LISRLIDHFGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIEIWYATS YLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
GYL RRL+ VVQ I+VRRTDCG+IRGI VSPGNRMIPE IFIQ LIGRVLADDIYMGPRCIG+RNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Query: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG NLVHPTRTRHG
Subjt: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
Query: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
R T+TLN KERVRKHI SDSEGEMHWSTDVYHAPEFTYSNVHLLPK SHLWILSGGSCGCS+VPFS YKDQDQI
Subjt: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
Query: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
VHSLCVERRYISSLSVNN+KVGQKF GPDLSGKNESGIP YSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQF SL+EREKELRPPSGISI I
Subjt: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
Query: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE NS+IGVATRLTLSI
Subjt: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
Query: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
RSRVGGLVR WITPTKKK FVFVRPVIIYELADGINLVKLFPQDL
Subjt: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
Query: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
LQERDNLELRVVNYILYGNGKPIRGI GTS++ VRTCL LNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Subjt: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Query: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKE QSL ILSASN LQMDLFND DPLI IRNSLGPLGAAPQIVNF SFYDLIT
Subjt: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
Query: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
HNPISLTKYLQLDNLKQT +VLKYYLMDENGGIFNSDPCS IVFNT NLNWHFLHHN HNNYCEE P TRISLG FFFENVCIAKNRPHLKSGQI+IVE
Subjt: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
Query: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
VDSVVIRSAKPYLATSGAT+HRHYGE+LYEG+TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Subjt: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Query: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
QSRISLVNKIQKV RSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAER GRALEEAICYRAVLLGI KASLNTQSFISEASFQETAR
Subjt: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
Query: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
VLAKAALRGRIDWLRGLKEN+VLGGMIPVGTGFRELAH SRQ NIPLE P KK G+
Subjt: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
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| YP_009346475.1 RNA polymerase beta' subunit [Cucumis x hytivus] | 0.0e+00 | 82.24 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
MAE ADLVFHNKVIDGTAIK LISRLIDHFGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIEIWYATS YLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
GYL RRL+ VVQ I+VRRTDCG+IRGI VSPGNRMIPE IFIQ LIGRVLADDIYMGPRCIG+RNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Query: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG +LVHPTRTRHG
Subjt: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
Query: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
R T+TLN KERVRKHI SDSEGEMHWSTDVYHAPEFTYSNVHLLPK SHLWILSGGSCGCS+VPFS YKDQDQI
Subjt: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
Query: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
VHSLCVERRYISSLSVNN+KVGQKF GPDLSGKN+SGIP YSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQF SL+EREKELRPPSGISI I
Subjt: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
Query: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
PING+FRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE NS+IGVATRLTLSI
Subjt: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
Query: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
RSRVGGLVR WITPTKKK FVFVRPVIIYELADGINLVKLFPQDL
Subjt: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
Query: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
LQERDNLELRV NYILYGNGKPIRGI GTS++ VRTCL LNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAY+RKRKDPSGSGLIFNNES
Subjt: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Query: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
DRTNINPFFSIYSKT+VPQSPSQNQGTIRTL NRNKE QSL ILSASN LQ+DLFND DPLI IRNSLGPLGAAPQIVNF SFY LIT
Subjt: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
Query: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILIVEVD
HNPISLTKYLQLDNLKQ +VLKYYLMDENGGIFNSDPC IVFNT NLNWHFLH N HNNYCEERPTRISLGQF FENVCIAKNRPHLKSGQI+IV+VD
Subjt: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILIVEVD
Query: SVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIVQS
S+VIRSAKPYLATSGAT+HRHYGEILYEG+TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSISMSLEKRIEGWNERITRILGIPWGFLIG+ELTIVQS
Subjt: SVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIVQS
Query: RISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETARVL
RISLVNKIQKV RSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAER GRALEEAICYRAVLLGI KASLNTQSFISEASFQETARVL
Subjt: RISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETARVL
Query: AKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
AKAALRGRIDWLRGLKEN+VLGGMIPVGTGFRELAH SRQ NIPLETPQKK G+
Subjt: AKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A249RXP5 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 82.93 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
MAE ADLVFHNKVIDGTAIK LISRLIDHFGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIEIWYATS YLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
GYL RRL+ VVQ I+VRRTDCG+IRGI VSPGNRMIPE IFIQ LIGRVLADDIYMGPRCIG+RNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Query: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG NLVHPTRTRHG
Subjt: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
Query: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
R T+TLN KERVRKHI SDSEGEMHWSTDVYHAPEFTYSNVHLLPK SHLWILSGGSCGCS+VPFS YKDQDQI
Subjt: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
Query: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
VHSLCVERRYISSLSVNN+KVGQKF GPDLSGKNESGIP YSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQF SL+EREKELRPPSGISI I
Subjt: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
Query: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE NS+IGVATRLTLSI
Subjt: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
Query: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
RSRVGGLVR WITPTKKK FVFVRPVIIYELADGINLVKLFPQDL
Subjt: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
Query: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
LQERDNLELRVVNYILYGNGKPIRGI GTS++ VRTCL LNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Subjt: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Query: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKE QSL ILSASN LQMDLFND DPLI IRNSLGPLGAAPQIVNF SFYDLIT
Subjt: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
Query: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
HNPISLTKYLQLDNLKQT +VLKYYLMDENGGIFNSDPCS IVFNT NLNWHFLHHN HNNYCEE P TRISLG FFFENVCIAKNRPHLKSGQI+IVE
Subjt: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
Query: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
VDSVVIRSAKPYLATSGAT+HRHYGE+LYEG+TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Subjt: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Query: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
QSRISLVNKIQKV RSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAER GRALEEAICYRAVLLGI KASLNTQSFISEASFQETAR
Subjt: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
Query: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
VLAKAALRGRIDWLRGLKEN+VLGGMIPVGTGFRELAH SRQ NIPLE P KK G+
Subjt: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
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| A0A249RYA1 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 82.93 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
MAE ADLVFHNKVIDGTAIK LISRLIDHFGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIEIWYATS YLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
GYL RRL+ VVQ I+VRRTDCG+IRGI VSPGNRMIPE IFIQ LIGRVLADDIYMGPRCIG+RNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Query: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG NLVHPTRTRHG
Subjt: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
Query: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
R T+TLN KERVRKHI SDSEGEMHWSTDVYHAPEFTYSNVHLLPK SHLWILSGGSCGCS+VPFS YKDQDQI
Subjt: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
Query: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
VHSLCVERRYISSLSVNN+KVGQKF GPDLSGKNESGIP YSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQF SL+EREKELRPPSGISI I
Subjt: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
Query: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE NS+IGVATRLTLSI
Subjt: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
Query: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
RSRVGGLVR WITPTKKK FVFVRPVIIYELADGINLVKLFPQDL
Subjt: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
Query: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
LQERDNLELRVVNYILYGNGKPIRGI GTS++ VRTCL LNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Subjt: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Query: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKE QSL ILSASN LQMDLFND DPLI IRNSLGPLGAAPQIVNF SFYDLIT
Subjt: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
Query: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
HNPISLTKYLQLDNLKQT +VLKYYLMDENGGIFNSDPCS IVFNT NLNWHFLHHN HNNYCEE P TRISLG FFFENVCIAKNRPHLKSGQI+IVE
Subjt: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
Query: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
VDSVVIRSAKPYLATSGAT+HRHYGE+LYEG+TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Subjt: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Query: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
QSRISLVNKIQKV RSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAER GRALEEAICYRAVLLGI KASLNTQSFISEASFQETAR
Subjt: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
Query: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
VLAKAALRGRIDWLRGLKEN+VLGGMIPVGTGFRELAH SRQ NIPLE P KK G+
Subjt: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
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| A0A249RYE7 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 82.93 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
MAE ADLVFHNKVIDGTAIK LISRLIDHFGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIEIWYATS YLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
GYL RRL+ VVQ I+VRRTDCG+IRGI VSPGNRMIPE IFIQ LIGRVLADDIYMGPRCIG+RNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Query: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG NLVHPTRTRHG
Subjt: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
Query: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
R T+TLN KERVRKHI SDSEGEMHWSTDVYHAPEFTYSNVHLLPK SHLWILSGGSCGCS+VPFS YKDQDQI
Subjt: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
Query: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
VHSLCVERRYISSLSVNN+KVGQKF GPDLSGKNESGIP YSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQF SL+EREKELRPPSGISI I
Subjt: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
Query: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE NS+IGVATRLTLSI
Subjt: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
Query: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
RSRVGGLVR WITPTKKK FVFVRPVIIYELADGINLVKLFPQDL
Subjt: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
Query: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
LQERDNLELRVVNYILYGNGKPIRGI GTS++ VRTCL LNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Subjt: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Query: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKE QSL ILSASN LQMDLFND DPLI IRNSLGPLGAAPQIVNF SFYDLIT
Subjt: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
Query: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
HNPISLTKYLQLDNLKQT +VLKYYLMDENGGIFNSDPCS IVFNT NLNWHFLHHN HNNYCEE P TRISLG FFFENVCIAKNRPHLKSGQI+IVE
Subjt: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
Query: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
VDSVVIRSAKPYLATSGAT+HRHYGE+LYEG+TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Subjt: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Query: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
QSRISLVNKIQKV RSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAER GRALEEAICYRAVLLGI KASLNTQSFISEASFQETAR
Subjt: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
Query: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
VLAKAALRGRIDWLRGLKEN+VLGGMIPVGTGFRELAH SRQ NIPLE P KK G+
Subjt: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
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| A0A249RYY9 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 82.93 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
MAE ADLVFHNKVIDGTAIK LISRLIDHFGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIEIWYATS YLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
GYL RRL+ VVQ I+VRRTDCG+IRGI VSPGNRMIPE IFIQ LIGRVLADDIYMGPRCIG+RNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Query: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG NLVHPTRTRHG
Subjt: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
Query: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
R T+TLN KERVRKHI SDSEGEMHWSTDVYHAPEFTYSNVHLLPK SHLWILSGGSCGCS+VPFS YKDQDQI
Subjt: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
Query: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
VHSLCVERRYISSLSVNN+KVGQKF GPDLSGKNESGIP YSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQF SL+EREKELRPPSGISI I
Subjt: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
Query: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE NS+IGVATRLTLSI
Subjt: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
Query: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
RSRVGGLVR WITPTKKK FVFVRPVIIYELADGINLVKLFPQDL
Subjt: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
Query: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
LQERDNLELRVVNYILYGNGKPIRGI GTS++ VRTCL LNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Subjt: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Query: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKE QSL ILSASN LQMDLFND DPLI IRNSLGPLGAAPQIVNF SFYDLIT
Subjt: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
Query: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
HNPISLTKYLQLDNLKQT +VLKYYLMDENGGIFNSDPCS IVFNT NLNWHFLHHN HNNYCEE P TRISLG FFFENVCIAKNRPHLKSGQI+IVE
Subjt: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
Query: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
VDSVVIRSAKPYLATSGAT+HRHYGE+LYEG+TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Subjt: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Query: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
QSRISLVNKIQKV RSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAER GRALEEAICYRAVLLGI KASLNTQSFISEASFQETAR
Subjt: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
Query: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
VLAKAALRGRIDWLRGLKEN+VLGGMIPVGTGFRELAH SRQ NIPLE P KK G+
Subjt: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
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| G3ETX5 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 82.93 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
MAE ADLVFHNKVIDGTAIK LISRLIDHFGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIEIWYATS YLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
GYL RRL+ VVQ I+VRRTDCG+IRGI VSPGNRMIPE IFIQ LIGRVLADDIYMGPRCIG+RNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Query: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG NLVHPTRTRHG
Subjt: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
Query: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
R T+TLN KERVRKHI SDSEGEMHWSTDVYHAPEFTYSNVHLLPK SHLWILSGGSCGCS+VPFS YKDQDQI
Subjt: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
Query: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
VHSLCVERRYISSLSVNN+KVGQKF GPDLSGKNESGIP YSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQF SL+EREKELRPPSGISI I
Subjt: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
Query: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE NS+IGVATRLTLSI
Subjt: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
Query: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
RSRVGGLVR WITPTKKK FVFVRPVIIYELADGINLVKLFPQDL
Subjt: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
Query: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
LQERDNLELRVVNYILYGNGKPIRGI GTS++ VRTCL LNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Subjt: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Query: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKE QSL ILSASN LQMDLFND DPLI IRNSLGPLGAAPQIVNF SFYDLIT
Subjt: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
Query: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
HNPISLTKYLQLDNLKQT +VLKYYLMDENGGIFNSDPCS IVFNT NLNWHFLHHN HNNYCEE P TRISLG FFFENVCIAKNRPHLKSGQI+IVE
Subjt: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERP--TRISLGQFFFENVCIAKNRPHLKSGQILIVE
Query: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
VDSVVIRSAKPYLATSGAT+HRHYGE+LYEG+TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Subjt: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Query: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
QSRISLVNKIQKV RSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAER GRALEEAICYRAVLLGI KASLNTQSFISEASFQETAR
Subjt: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
Query: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
VLAKAALRGRIDWLRGLKEN+VLGGMIPVGTGFRELAH SRQ NIPLE P KK G+
Subjt: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
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| SwissProt top hits | e value | %identity | Alignment |
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| B1A925 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 71.03 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
MAE A+LVFHNKVIDGTAIK LISRLID FGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIEIWYATS YLRQEMNPNFR+TDPFNPVHIMSFSGARGNASQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
GYL RRL+ VVQ I+VRRTDCG+IRGI VSP NR +PE IFIQ LIGRVLADDIYMGPRCI +RNQDIGIGL+NRFITF+TQ ISIRTPFTCRSTSWICR
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Query: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG +LVHPTRTRHG
Subjt: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
Query: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
R T+TLN+KERVRKHI S+SEGEMHWSTDVYHAPEFTYSNVHLLPK SHLWILSGGS SLVPFS +KDQDQ+
Subjt: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
Query: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
+HSL VE+ ISSL+VNN++ KF + S K + GIP YSE + IL TG NL Y A H NSDLLAKRRRN FII F S++E+EKEL P SGISI I
Subjt: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
Query: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
PING+FRRNSILAFFDDP+YRR SSGI KYGTIG HSI+KKED+IEYRGVK FK KY QMKVDRFFFIPEE NS+IGV TR+TL+I
Subjt: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
Query: RSRVGGLVR---------------------------------------------------W-----ITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
RS+VGGLVR W ITPTKKK FV VRPV YE+ADGINL LFPQDL
Subjt: RSRVGGLVR---------------------------------------------------W-----ITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
Query: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDT--AYMRKRKDPSGSGLIFNN
+E+DN++LRVVNYILYGNGKP+RGI TS++ VRTCL LNWD+D KSSS+E+ R FVEVSTN L+R+FLRIDL KS + +Y+RKR DPSGSGLI +N
Subjt: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDT--AYMRKRKDPSGSGLIFNN
Query: ESDRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFN-------------DDPLIEIRNSLGPLGAAPQIVNFDSFYDL
SDR INPF Y K R+ QS S+N GTIRTL NRNKE QSL ILS+SN QM FN DPLI IRNSLGP+G A QI NF S Y L
Subjt: ESDRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFN-------------DDPLIEIRNSLGPLGAAPQIVNFDSFYDL
Query: ITHNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILIVE
ITHN IS+TKY QLDNL Q +V+KYYLMDE G ++N DPCS I+ N NLNW+FL+ N H+NYCEE T ISLGQF ENVC+AKN PHLKSGQ+LIV+
Subjt: ITHNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILIVE
Query: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
VDSVVIRSAKPYLAT GAT+H HYGEILYEG+TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSIS++LEKR+EGWN+RITRILGIPWGFLIG+ELTIV
Subjt: VDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIV
Query: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
QSRISLVNKIQKV RSQGV+IHNRHIEIIVRQITSKVLVSE+GMSNVF PGELIGLLRAER GRALEEAICYRA+LLGI +ASLNTQSFISEASFQETAR
Subjt: QSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETAR
Query: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQK
VLAKAALRGRIDWL+GLKEN+VLGGMIP GTGF+ L H SRQ +I LET +K
Subjt: VLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQK
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| B1NWE0 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 71.25 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
MAE A+LVFHNK IDGTAIK LISRLIDHFGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQSLILEKH+HYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIEIWYATS YLRQEMN NFRMT+PFNPVHIMSFSGARGN SQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
GYL RRL+ VVQ I+VRRTDCG+ RGI VSP N M+PE IFIQ IGRVLAD+IYMG RCI +RNQDIGIGL NRFITF+TQ ISIRTPFTCRSTSWICR
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Query: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG +LVHP RTRHG
Subjt: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
Query: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
R +TLNFKE+VRKHI SDSEGEMHWSTDVYHAPEFTYSNVHLLPK SHLWILSG SC S+VPFS +KDQDQ+
Subjt: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
Query: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
VHSL V+RRYISS SVNN++V KF D SGK ESGIP YSELN +CTG NL Y I + NSDLLAKRRRN FII F S++EREKEL S ISI I
Subjt: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
Query: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
PING+FRRNS+ A+FDDPQYR+ SSGITKYG IGVHSI+KKEDLIEYRGVK+FKPKY Q KVDRFFFIPEE NS+IGV T++ L+
Subjt: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
Query: RSRVGGLVR---------------------------------------------------W-----ITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
RSRVGGLVR W ITPTKKK FV VRPVIIYE+A+GINL LFPQDL
Subjt: RSRVGGLVR---------------------------------------------------W-----ITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
Query: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYM-RKRKDPSGSGLIFNNE
LQE+DNL+LRVVNYILYG GKPIRGI TS++ VRTCL LNWD+DKKSSSIE+ARA+FVE+STNGL+R+FLRI+L K +Y+ RKR DPSGS I NN
Subjt: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYM-RKRKDPSGSGLIFNNE
Query: SDRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFY--D
SDRTNINPF+ IYSKTRV QS QNQGTI TL N NKE QSL ILS+SN QMD FND DP+I IRNSLGPLG A QI NF FY +
Subjt: SDRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFY--D
Query: LITHNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILIV
LITHN IS+TKY +L NLKQT +VLKYYLMDENG I N DPCS V N NLNW+FLHH NYCE T ISLGQF EN+C+AKN PHLKSGQ++IV
Subjt: LITHNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILIV
Query: EVDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTI
+DSVVIRSAKPYLAT GAT+H HYGEILYEG TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSIS++LEKR+EGWNE ITRILGIPWGFLIG+ELTI
Subjt: EVDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTI
Query: VQSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETA
VQSRISLVNKIQKV RSQGV+IHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAER GRALEEAICY A+LLGI +ASLNTQSFISEASFQET
Subjt: VQSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETA
Query: RVLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
RVLAKAALRGRIDWL+GLKEN+VLGGMIPVGTGF+ L SRQ +NIPL+T +K G+
Subjt: RVLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
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| Q0ZJ30 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 71.53 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
M E A+LVFHNKVIDGTA+K LISRLIDHFGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIEIWYATS YLRQEMN NFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
GYL RRL+ VVQ I+VRRTDCG+IRGI VSP N MIPE IFIQ LIGRVLADDIYMGPRCI +RNQDIGIGL+NRFITFQ Q ISIRTPFTC+STSWICR
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Query: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG + VHPTRTRHG
Subjt: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
Query: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
R T+T NFKERVRKHI SDSEGEMHWSTDVYHAPEFTY NVHLLPK SHLWILSGGSC S+VPFS +KDQDQ+
Subjt: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
Query: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
V SL VERRYIS+ SV N++V +F DLSGK E IP+YSELN I+ TG+ NL PAI H NSDLLAKRRRN FII F S++E EKEL PPSGISI I
Subjt: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
Query: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
PING+FRRNSILA+FDDP+YRRNSSGITKYGTI HSI+KKEDLIEYRGVK+FKPKY QMKVDRFFFIPEE NS+IGV TR+TL+
Subjt: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
Query: RSRVGGLVR---------------------------------------------------W-----ITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
RSRV GLVR W ITPTKKK FV VRPV+ YE+ADGINL LFPQDL
Subjt: RSRVGGLVR---------------------------------------------------W-----ITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
Query: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
LQERDN+ L+VVNYILYGNGKPIRGI TS++ VRTCL LNW ++KKSS IE ASF+EV TNGL+R+FL I+L KS +Y KR DPS SGLI +N S
Subjt: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Query: DRTNINPFFSIYSKTRVP----QSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFY
D TNINPF+SIY K R+ Q +NQGTIRTL NRNKE QSL ILS+SN +M FND D I IRNSLGPLG A QI NF SFY
Subjt: DRTNINPFFSIYSKTRVP----QSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFY
Query: DLITHNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILI
LITHN I +TKY QLDN KQT + LKYYLMDENG +N DPCS I+ N NLNW+FLHH NYCEE T ISLGQF ENVCIAKN PHLKSGQ+LI
Subjt: DLITHNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILI
Query: VEVDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELT
V+VDSVVIRSAKPYLAT GAT+H HYGEILYEG+TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSISM+LEKR+EGWNE ITRILGIPWGF IG+ELT
Subjt: VEVDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELT
Query: IVQSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQET
I QSRISLVNKIQKV RSQGV+IHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAER GRA EEAICYR +LLGI +ASLNTQSFISEASFQET
Subjt: IVQSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQET
Query: ARVLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKK
ARVLAKAAL GRIDWL+GLKEN+VLGGMIPVGTGF+ L H SRQ NIPLE KK
Subjt: ARVLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKK
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| Q49L08 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 70.51 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
MAE +LVFHNKVIDGTAIK LISRLIDHFGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIE+WYATS YLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
GYL RRL+ VVQ I+VRRTDCG+IRG+ VSP N M+PE IFIQ LIGRVLADDIYMGPRCI +RNQDIGIGL+NRFITF+TQPISIRTPFTCRSTSWICR
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Query: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG +LVHPTRTRHG
Subjt: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
Query: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
R T+T N KERVRKHI S+SEGEMHWSTDVYHAPEFTYSNVHLLPK SHLWILSGGSC S VPFS YKDQDQ+
Subjt: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
Query: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGK-NESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISIS
+ S ERRYISSLSVNN+++ + D SGK E IP YSELN I+ NL YP F NSDLLAKRRRN F+I S++ER+KEL P SGISI
Subjt: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGK-NESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISIS
Query: IPINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLS
+PING+ RRNSILA+FDDP+YRR SSGI KYGT+GVHS++KKEDLIEYRG+K+FK K QMK+D FFFIPEE NSLIGV TR+ L+
Subjt: IPINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLS
Query: IRSRVGGLVR---------------------------------------------------W-----ITPTKKKSFVFVRPVIIYELADGINLVKLFPQD
RSRVGGLVR W ITPTKKK FV VRPV+ YE+ DGINL LFP D
Subjt: IRSRVGGLVR---------------------------------------------------W-----ITPTKKKSFVFVRPVIIYELADGINLVKLFPQD
Query: LLQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLI--FN
LLQERDN++LRVVNYI+Y NGKPIRGI TS++ VRTCL LNWD+DKKSSSIE+A SFVEVSTNGL+R+FLRIDL K +Y+RKR DPSGSGLI +
Subjt: LLQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLI--FN
Query: NESDRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFN-------------DDPLIEIRNSLGPLGAAPQIVNFDSFYD
N SD TN NPF YSKT++ Q SQNQGTIRTL N+NKE SL ILS+SN +M FN DP+I+IRNS+GPLG Q VNF SFY
Subjt: NESDRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFN-------------DDPLIEIRNSLGPLGAAPQIVNFDSFYD
Query: LITHNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILIV
LITHNPI +TKYLQL+NLKQT +V+ YYLMDENG I N D CS IV N+ NLNW+FLHHN ++NY EER T ISLGQF ENVCI+KN PHLKSGQ+LIV
Subjt: LITHNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILIV
Query: EVDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTI
+VDSVVIRSAKPYLAT GAT+H HYGEILYEG+TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSISM+LEKRIEGWNE I +ILGIPWGFLIG+ELTI
Subjt: EVDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTI
Query: VQSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETA
VQSRISLVNKIQKV RSQGV+IHNRHIEIIVRQITSKVLVSEDGMSNVF PGELIGLLRA R GRALEE+ICYRA+LLGI +ASLNTQSFISEASFQETA
Subjt: VQSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETA
Query: RVLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
RVLAKAALRGRIDWL+GLKEN+V+GGMIPVGTGF+ L H SRQ +NIPL+T +K F G+
Subjt: RVLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
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| Q4VZP3 DNA-directed RNA polymerase subunit beta'' | 0.0e+00 | 82.24 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
MAE ADLVFHNKVIDGTAIK LISRLIDHFGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIEIWYATS YLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
GYL RRL+ VVQ I+VRRTDCG+IRGI VSPGNRMIPE IFIQ LIGRVLADDIYMGPRCIG+RNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWICR
Query: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG +LVHPTRTRHG
Subjt: LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF-----------------------
Query: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
R T+TLN KERVRKHI SDSEGEMHWSTDVYHAPEFTYSNVHLLPK SHLWILSGGSCGCSLVPFS YKDQDQI
Subjt: -----------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQIQ
Query: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
VHSLCVERRYISSLSVNN+KVGQKF GPDLSGKNE+GIP YSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQF SL+EREKELRPPSGISI I
Subjt: VHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISISI
Query: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
PING+FRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE NS+IGVATRLTLSI
Subjt: PINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTLSI
Query: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
RSRVGGLVR WITPTKKK FVFVRPVIIYELADGINLVKLFPQDL
Subjt: RSRVGGLVR--------------------------------------------------------WITPTKKKSFVFVRPVIIYELADGINLVKLFPQDL
Query: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
LQERDNLELRV NYILYGNGKPIRGI GTS++ VRTCL LNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAY+RKRKDPSGSGLIFNNES
Subjt: LQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNNES
Query: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
DRTNINPFFSIYSKTRVPQSPSQNQGTIRTL NRNKE QSL ILSASN LQ+DLFND DPLI IRNSLGPLGAAPQIVNF SFY LIT
Subjt: DRTNINPFFSIYSKTRVPQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFND-------------DPLIEIRNSLGPLGAAPQIVNFDSFYDLIT
Query: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILIVEVD
HNPISLTKYLQLDNLKQ +VLKYYLMDENGGI NSDPC IVFNT NLNWHFLH N HNNYCEE PTRISLGQFFFENVCIAKNRPHLKSGQI+IV+VD
Subjt: HNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILIVEVD
Query: SVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIVQS
S+VIRSAKPYLATSGAT+HRHYGEILYEG+TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSISMSLEKRIEGWNERITRILGIPWGFLIG+ELTIVQS
Subjt: SVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTIVQS
Query: RISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETARVL
RISLVNKIQKV RSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAER GRALEEAICYRAVLLGI KASLNTQSFISEASFQETARVL
Subjt: RISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETARVL
Query: AKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
AKAALRGRIDWLRGLKEN+VLGGMIPVGTGFRELAH SRQ NIPLETP KK G+
Subjt: AKAALRGRIDWLRGLKENLVLGGMIPVGTGFRELAHPSRQDQNIPLETPQKKFDRGK
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT3G57660.1 nuclear RNA polymerase A1 | 3.0e-14 | 29.3 | Show/hide |
Query: NPVHIMSFSGARG---NASQVHQLVGMRGLISDPQGQMID---LP--------------MKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDAGYLRRR
N + +M+ SGA+G N Q+ +G + L +M+ LP + GL EY C R+G+VDTAV+TS +GYL+R
Subjt: NPVHIMSFSGARG---NASQVHQLVGMRGLISDPQGQMID---LP--------------MKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDAGYLRRR
Query: L------LSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIR---------TPFT
L L V D VR D GSI + S FI++ + D+ + +C ++D+ G + PIS++ P
Subjt: L------LSVVQDILVRRTDCGSIRGIDVSPGNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIR---------TPFT
Query: CRSTSWICR----LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG
R S R L +S L + GE VG++A QS+GEP TQ+ L TFH G
Subjt: CRSTSWICR----LCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG
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| AT4G35800.1 RNA polymerase II large subunit | 1.1e-05 | 38.46 | Show/hide |
Query: MKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDAGYLRRRLLSVVQDILVR
++++ GL+ E+ G R+G++DTAV+TS+ GY++RRL+ ++DI+V+
Subjt: MKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDAGYLRRRLLSVVQDILVR
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| AT4G35800.1 RNA polymerase II large subunit | 3.3e-05 | 36.62 | Show/hide |
Query: EAICYRAVLLGIRKASLNTQSF--ISEASFQETARVLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFREL
+ + YR L+ I + +N + SF+ET +L AA D LRG+ EN++LG + P+GTG EL
Subjt: EAICYRAVLLGIRKASLNTQSF--ISEASFQETARVLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFREL
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| AT4G35800.1 RNA polymerase II large subunit | 2.4e-03 | 59.38 | Show/hide |
Query: LVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG
LV GE +G +A QSIGEP TQ+ L TFH G
Subjt: LVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG
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| AT5G60040.1 nuclear RNA polymerase C1 | 1.2e-10 | 26.79 | Show/hide |
Query: GLSLTEYRISCYGARKGVVDTAVRTSDAGYLRRRLLSVVQDILVR-----RTDCGSI-------RGIDVSPGNRMIPESIFIQRLIGRVLA------DDI
GL+ TE+ G R+G+VDTAV+T+ GY+ RRL+ ++D+LV R G I G+D + + RL +V A
Subjt: GLSLTEYRISCYGARKGVVDTAVRTSDAGYLRRRLLSVVQDILVR-----RTDCGSI-------RGIDVSPGNRMIPESIFIQRLIGRVLA------DDI
Query: YMGPRCIGLRNQ-------------DIGIGLINRFITF-------QTQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Y+ + + + D + + F++ Q + + T + ++C R +E G A+G I QSIGEPGTQ+
Subjt: YMGPRCIGLRNQ-------------DIGIGLINRFITF-------QTQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Query: RLRTFHTGG
L+TFH G
Subjt: RLRTFHTGG
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| AT5G60040.2 nuclear RNA polymerase C1 | 1.2e-10 | 26.79 | Show/hide |
Query: GLSLTEYRISCYGARKGVVDTAVRTSDAGYLRRRLLSVVQDILVR-----RTDCGSI-------RGIDVSPGNRMIPESIFIQRLIGRVLA------DDI
GL+ TE+ G R+G+VDTAV+T+ GY+ RRL+ ++D+LV R G I G+D + + RL +V A
Subjt: GLSLTEYRISCYGARKGVVDTAVRTSDAGYLRRRLLSVVQDILVR-----RTDCGSI-------RGIDVSPGNRMIPESIFIQRLIGRVLA------DDI
Query: YMGPRCIGLRNQ-------------DIGIGLINRFITF-------QTQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Y+ + + + D + + F++ Q + + T + ++C R +E G A+G I QSIGEPGTQ+
Subjt: YMGPRCIGLRNQ-------------DIGIGLINRFITF-------QTQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL
Query: RLRTFHTGG
L+TFH G
Subjt: RLRTFHTGG
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| ATCG00170.1 DNA-directed RNA polymerase family protein | 0.0e+00 | 67.38 | Show/hide |
Query: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
MAE A+LVFHNKVIDGTAIK LISRLIDHFGMAYTSHILDQ TLGFQQATATSI LGIDDL TIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLRQ
Subjt: MAEGADLVFHNKVIDGTAIKGLISRLIDHFGMAYTSHILDQNHSTLGFQQATATSIELGIDDLFTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQ
Query: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
SIEIWYATS YLRQEMNPNFRMTDPFNPVH+MSFSGARGNASQVHQLVGMRGL+SDPQGQMIDLP++SNLREGLSLTEY ISCYGARKGVVDTAVRTSDA
Subjt: SIEIWYATSSYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLISDPQGQMIDLPMKSNLREGLSLTEYRISCYGARKGVVDTAVRTSDA
Query: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSP--GNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWI
GYL RRL+ VVQ I+VRRTDCG+IRGI VSP NRM+ E IFIQ LIGRVLADDIY+G RC+ RNQD+GIGL+NR ITF TQ ISIRTPFTCRSTSWI
Subjt: GYLRRRLLSVVQDILVRRTDCGSIRGIDVSP--GNRMIPESIFIQRLIGRVLADDIYMGPRCIGLRNQDIGIGLINRFITFQTQPISIRTPFTCRSTSWI
Query: CRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF---------------------
CRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQL LRTFHTGG +LVHPTRTRHG
Subjt: CRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLRLRTFHTGG----------------------NLVHPTRTRHGF---------------------
Query: -------------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQ
RE T+T +FKERVRK+I SDSEGEMHWSTDV HAPEFTYSNVHLLPK SHLWILSGGSCG SL+ FS +KDQDQ
Subjt: -------------------------AREHTHTLNFKERVRKHIDSDSEGEMHWSTDVYHAPEFTYSNVHLLPKRSHLWILSGGSCGCSLVPFSFYKDQDQ
Query: IQVHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISI
+ + L ER+ ISSLSVNN++V QKF D + + GI YSELN L T NL Y AIFH NSDLLAKRRRN F+I F S++E+EKE P SGIS+
Subjt: IQVHSLCVERRYISSLSVNNEKVGQKFDGPDLSGKNESGIPSYSELNPILCTGQSNLTYPAIFHGNSDLLAKRRRNGFIIQFSSLKEREKELRPPSGISI
Query: SIPINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTL
IPING+FRRNSI AFFDDP+YRR SSGI KYGT+ SI++KED+IEYRGV+ K KY +MKVDRFFFIPEE S+IGV TRLTL
Subjt: SIPINGLFRRNSILAFFDDPQYRRNSSGITKYGTIGVHSILKKEDLIEYRGVKDFKPKYQMQMKVDRFFFIPEE--------------NSLIGVATRLTL
Query: SIRSRVGGLVR---------------------------------------------------W-----ITPTKKKSFVFVRPVIIYELADGINLVKLFPQ
+IRS+VGGL+R W ITPTKKK FV VRPV YE+AD INL LFPQ
Subjt: SIRSRVGGLVR---------------------------------------------------W-----ITPTKKKSFVFVRPVIIYELADGINLVKLFPQ
Query: DLLQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNN
DL +E+DN++LRV NYILYGNGKP RGI TS++ VRTCL LNWD K+SS+E+ RA FVEVST GL+++F+RI L KS +Y+RKR + SGLI
Subjt: DLLQERDNLELRVVNYILYGNGKPIRGIDGTSMKDVRTCLFLNWDRDKKSSSIEDARASFVEVSTNGLVRNFLRIDLGKSDTAYMRKRKDPSGSGLIFNN
Query: ESDRTNINPFFSIYSKTRV-PQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFN-------------DDPLIEIRNSLGPLGAAPQIVNFDSFYD
++NPF+SI K+ + QS QN GTIR NRNKE QSL ILS+SN +M FN + LI I+NS GPLG A I NF SF
Subjt: ESDRTNINPFFSIYSKTRV-PQSPSQNQGTIRTLFNRNKEGQSLRILSASNSLQMDLFN-------------DDPLIEIRNSLGPLGAAPQIVNFDSFYD
Query: LITHNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILIV
L+T+N ISL KY QLDNLK + + YL+DENG I N DP S +V N LNW+FLH N H+NYCEE T ISLGQFF ENVCIAK PHLKSGQ+LIV
Subjt: LITHNPISLTKYLQLDNLKQTLKVLKYYLMDENGGIFNSDPCSKIVFNTLNLNWHFLHHNSHNNYCEERPTRISLGQFFFENVCIAKNRPHLKSGQILIV
Query: EVDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTI
+ DS VIRSAKPYLAT GA +H HY EILYEG+TLVTFIY KSRSGDI QGLPKVEQVLEV SIDSIS++LEKRI+GWN+ ITRILGIPWGFLIG+ELTI
Subjt: EVDSVVIRSAKPYLATSGATLHRHYGEILYEGETLVTFIYAKSRSGDIRQGLPKVEQVLEVPSIDSISMSLEKRIEGWNERITRILGIPWGFLIGSELTI
Query: VQSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETA
VQSRISLVNKIQKV RSQGV+IHNRHIEIIVRQITSKVLVSE+GMSNVF PGELIGLLRAER GRALEEAICYRAVLLGI +ASLNTQSFISEASFQETA
Subjt: VQSRISLVNKIQKVSRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERRGRALEEAICYRAVLLGIRKASLNTQSFISEASFQETA
Query: RVLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRE-LAHPSRQDQNIPLETPQK
RVLAKAALRGRIDWL+GLKEN+VLGG+IP GTGF + L H SRQ NI LE K
Subjt: RVLAKAALRGRIDWLRGLKENLVLGGMIPVGTGFRE-LAHPSRQDQNIPLETPQK
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