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Pay0011135 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0011135
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotransposon protein
Genome locationchr01:19484129..19484728
RNA-Seq ExpressionPay0011135
SyntenyPay0011135
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035620.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-7092.91Show/hide
Query:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQR
        ENCLGALDGTYIKVN+PASDR RYRTRKGEVATNVLGVCDTKGDFVYVLAG EGSAADSRILRDA+SRPN LK+ KGYYYLVDAGYPNA+GFLAPYRGQR
Subjt:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQR

Query:  YHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR
        YHLQEWRGPEN PSTSKEFFNMKHSSA NVIERAFGVLKGR
Subjt:  YHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR

KAA0039620.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.4e-6990.14Show/hide
Query:  MENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQ
        ++NCLGALDGTYIKVN+PASDR RYRTRKGEVATNVLGVCDTKGDFVYVL G EGSAADSRILRDA+SRPN LK+ KGYYYLVD GYPNA+GFLAPYRGQ
Subjt:  MENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQ

Query:  RYHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR
        RYHLQEWRGPEN PSTSKEFFNMKHSSA NVIERAFGVLKGR
Subjt:  RYHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR

KAA0046727.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-7092.91Show/hide
Query:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQR
        ENCLGALDGTYIKVN+PASDR RYRTRKGEVATNVLGVCDTKGDFVYVLAG EGSAADSRILRDA+SRPN LK+ KGYYYLVDAGYPNA+GFLAPYRGQR
Subjt:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQR

Query:  YHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR
        YHLQEWRGPEN PSTSKEFFNMKHSSA NVIERAFGVLKGR
Subjt:  YHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR

KAA0051057.1 retrotransposon protein [Cucumis melo var. makuwa]6.1e-7092.2Show/hide
Query:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQR
        ENCLGALDGTYIKVN+PASDR RYRTRKGEVATNVLGVCDTKGDFVYVLAG EGSAADSRILRDA+SRPN LK+ KGYYYLVDAGYPNA+GFLAPYRGQR
Subjt:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQR

Query:  YHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR
        YHLQEWRGPEN PSTSKEFFNMKHS A NVIERAFGVLKGR
Subjt:  YHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR

XP_008447300.1 PREDICTED: putative nuclease HARBI1 [Cucumis melo]1.0e-7293.66Show/hide
Query:  MENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQ
        MENCLGALDGTYIKVNIPASDR RYRTRKG+VATNVLGVCDTKGDFVYV+AGCEGSAADSRILRDA+SRPNGLK+SKGYYYLVDAGYPNAKGFLAPYRGQ
Subjt:  MENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQ

Query:  RYHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR
        RYHLQEWRGPEN PSTSKEFFN+KHSSA NVIERAF VLKGR
Subjt:  RYHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR

TrEMBL top hitse value%identityAlignment
A0A1S3BHZ9 putative nuclease HARBI14.9e-7393.66Show/hide
Query:  MENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQ
        MENCLGALDGTYIKVNIPASDR RYRTRKG+VATNVLGVCDTKGDFVYV+AGCEGSAADSRILRDA+SRPNGLK+SKGYYYLVDAGYPNAKGFLAPYRGQ
Subjt:  MENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQ

Query:  RYHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR
        RYHLQEWRGPEN PSTSKEFFN+KHSSA NVIERAF VLKGR
Subjt:  RYHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR

A0A5A7TXW1 Retrotransposon protein6.0e-7192.91Show/hide
Query:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQR
        ENCLGALDGTYIKVN+PASDR RYRTRKGEVATNVLGVCDTKGDFVYVLAG EGSAADSRILRDA+SRPN LK+ KGYYYLVDAGYPNA+GFLAPYRGQR
Subjt:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQR

Query:  YHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR
        YHLQEWRGPEN PSTSKEFFNMKHSSA NVIERAFGVLKGR
Subjt:  YHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR

A0A5A7U9H2 Retrotransposon protein3.0e-7092.2Show/hide
Query:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQR
        ENCLGALDGTYIKVN+PASDR RYRTRKGEVATNVLGVCDTKGDFVYVLAG EGSAADSRILRDA+SRPN LK+ KGYYYLVDAGYPNA+GFLAPYRGQR
Subjt:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQR

Query:  YHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR
        YHLQEWRGPEN PSTSKEFFNMKHS A NVIERAFGVLKGR
Subjt:  YHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR

A0A5D3BDX0 Retrotransposon protein6.0e-7192.91Show/hide
Query:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQR
        ENCLGALDGTYIKVN+PASDR RYRTRKGEVATNVLGVCDTKGDFVYVLAG EGSAADSRILRDA+SRPN LK+ KGYYYLVDAGYPNA+GFLAPYRGQR
Subjt:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQR

Query:  YHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR
        YHLQEWRGPEN PSTSKEFFNMKHSSA NVIERAFGVLKGR
Subjt:  YHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR

A0A5D3BTY4 Putative nuclease HARBI16.6e-7090.14Show/hide
Query:  MENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQ
        ++NCLGALDGTYIKVN+PASDR RYRTRKGEVATNVLGVCDTKGDFVYVL G EGSAADSRILRDA+SRPN LK+ KGYYYLVD GYPNA+GFLAPYRGQ
Subjt:  MENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQ

Query:  RYHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR
        RYHLQEWRGPEN PSTSKEFFNMKHSSA NVIERAFGVLKGR
Subjt:  RYHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein3.6e-2036.55Show/hide
Query:  LGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKG-YYYLVDAGYPNAKGFLAPYRGQ---
        +GA+DGT++ V +    +  Y  R    + N++ +CD K  F Y+  G  GS  D+ +L+ A    +   +     YYLVD+GYPN +G LAPYR     
Subjt:  LGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKG-YYYLVDAGYPNAKGFLAPYRGQ---

Query:  --RYHL-QEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR
          RYH+ Q + GP   P    E FN  H+S  +VIER F + K +
Subjt:  --RYHL-QEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR

AT5G28730.1 unknown protein1.3e-0934.26Show/hide
Query:  GEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVS-RPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQRYHLQEWRGPENVPSTSKEFFNMKHSSA
        G  + NVL +CD    F Y   G  GS  D+R+L  A+S  P         YYLVD+GY N +G+LAPYR +    Q+          S  F  +     
Subjt:  GEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVS-RPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQRYHLQEWRGPENVPSTSKEFFNMKHSSA

Query:  HNVIERAF
        HN+ +  F
Subjt:  HNVIERAF

AT5G28950.1 unknown protein6.2e-1231.53Show/hide
Query:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGL----KMSKGYYYLVDAGYPNAKGFLAPY
        ++C+GA+D T+I   +       +R RKG+++ N+L  C+   +F+YVL+G EGSA DS++L DA++R +      +  +    +V+    N    L   
Subjt:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGL----KMSKGYYYLVDAGYPNAKGFLAPY

Query:  RGQRYHLQEWR
          QR +  +WR
Subjt:  RGQRYHLQEWR

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)5.1e-2251.55Show/hide
Query:  FVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQRYHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR
        F+YVL+G EGSA DSR+L DA+ +          +YLVD G+ N   FLAP+RG RYHLQE+ G    P T  E FN++H S  NVIER FG+ K R
Subjt:  FVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQRYHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.3e-2238.3Show/hide
Query:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQR
        ++C+G +D  +I V +   ++  +R   G +  NVL        F YVLAG EGSA+D ++L  A++R N L++ +G YY+VD  YPN  GF+APY G  
Subjt:  ENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQR

Query:  YHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR
         + +E          +KE FN +H   H  I R FG LK R
Subjt:  YHLQEWRGPENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATTGCCTAGGTGCATTAGATGGAACGTACATAAAAGTGAACATTCCAGCAAGTGATCGGGTTAGGTATAGAACACGCAAGGGGGAGGTGGCCACAAATGTACT
TGGCGTGTGTGACACGAAAGGAGATTTCGTTTACGTACTTGCCGGTTGCGAAGGATCAGCTGCGGATTCACGCATCCTCCGTGATGCCGTTTCAAGACCTAATGGGCTGA
AGATGTCCAAGGGGTATTACTACCTAGTTGATGCCGGATACCCAAATGCGAAGGGTTTCCTGGCACCATACAGAGGACAACGCTATCACTTGCAAGAATGGCGTGGCCCT
GAAAATGTACCTTCAACGTCGAAAGAGTTCTTCAATATGAAGCATTCGTCTGCTCATAATGTAATCGAAAGAGCATTCGGTGTCTTGAAGGGTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATTGCCTAGGTGCATTAGATGGAACGTACATAAAAGTGAACATTCCAGCAAGTGATCGGGTTAGGTATAGAACACGCAAGGGGGAGGTGGCCACAAATGTACT
TGGCGTGTGTGACACGAAAGGAGATTTCGTTTACGTACTTGCCGGTTGCGAAGGATCAGCTGCGGATTCACGCATCCTCCGTGATGCCGTTTCAAGACCTAATGGGCTGA
AGATGTCCAAGGGGTATTACTACCTAGTTGATGCCGGATACCCAAATGCGAAGGGTTTCCTGGCACCATACAGAGGACAACGCTATCACTTGCAAGAATGGCGTGGCCCT
GAAAATGTACCTTCAACGTCGAAAGAGTTCTTCAATATGAAGCATTCGTCTGCTCATAATGTAATCGAAAGAGCATTCGGTGTCTTGAAGGGTCGATGA
Protein sequenceShow/hide protein sequence
MENCLGALDGTYIKVNIPASDRVRYRTRKGEVATNVLGVCDTKGDFVYVLAGCEGSAADSRILRDAVSRPNGLKMSKGYYYLVDAGYPNAKGFLAPYRGQRYHLQEWRGP
ENVPSTSKEFFNMKHSSAHNVIERAFGVLKGR