; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0011174 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0011174
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationchr05:4951462..4954377
RNA-Seq ExpressionPay0011174
SyntenyPay0011174
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449708.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo]2.3e-184100Show/hide
Query:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
Subjt:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

XP_008449711.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo]1.7e-17998.53Show/hide
Query:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
Subjt:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLEL     ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

XP_011657641.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus]1.5e-17897.07Show/hide
Query:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        MQSKSKSVNQ ESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ+NCQHAVS
Subjt:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGS+AA CALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

XP_011657643.1 nuclear transcription factor Y subunit A-1 isoform X2 [Cucumis sativus]1.1e-17395.6Show/hide
Query:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        MQSKSKSVNQ ESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ+NCQHAVS
Subjt:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLEL     ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGS+AA CALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

XP_038901586.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida]3.9e-17194.43Show/hide
Query:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        MQSKSKSVNQ ESEPPNMQQTS Y+EPWWRSIGYNHISPP AGGN+SNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQ+NCQ AVS
Subjt:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAP VH GC+TQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNE NSL STMKDKDS SGQAISSHSAGSSGSEAA CALAETWNSS+GQQEARTQLHEAYEARSYVN  SQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERG+DGDCSGQQRSISENQA QRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

TrEMBL top hitse value%identityAlignment
A0A0A0KEL9 Nuclear transcription factor Y subunit7.1e-17997.07Show/hide
Query:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        MQSKSKSVNQ ESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ+NCQHAVS
Subjt:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGS+AA CALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

A0A1S3BNK4 Nuclear transcription factor Y subunit1.1e-184100Show/hide
Query:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
Subjt:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

A0A1S4DXQ9 Nuclear transcription factor Y subunit8.4e-18098.53Show/hide
Query:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
Subjt:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLEL     ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

A0A5A7TER3 Nuclear transcription factor Y subunit3.0e-16993.55Show/hide
Query:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS
        MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESND                      ASYGQVQNNCQHAVS
Subjt:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVS

Query:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
Subjt:  AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY

Query:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
        SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Subjt:  SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

A0A6J1JHB5 Nuclear transcription factor Y subunit5.1e-16993.59Show/hide
Query:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA-SYGQVQNNCQHAV
        MQSK +SVNQ ESEPPNMQQTSSYSEPWWRSIGYNHIS PAAGGN+SNSTSLEC NGASESNDG SMSNDDLNEDDDDDTTKDSHA SYGQVQNNCQHAV
Subjt:  MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA-SYGQVQNNCQHAV

Query:  SAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV
        SAAP VH GCITQPPQLELVGHSIACASN YQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK+
Subjt:  SAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKV

Query:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN
        RKPYLHESRHQHAMRRARGSGGRFAKKNE NS  ST+K+KDSGSGQA SSHSAGSSGSEAA CALAETWNSSNGQQEARTQLHEAYEARSYVNGS QFHN
Subjt:  RKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN

Query:  YSSFQASSYGLRSGERGDDGDCSGQQR-SISENQAAQRRLAIK
        YSSFQASSY LRSGERGDDGDCSGQQR SISENQAAQRRLAIK
Subjt:  YSSFQASSYGLRSGERGDDGDCSGQQR-SISENQAAQRRLAIK

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-77.0e-2246.43Show/hide
Query:  HSIACASNPYQDPYYAGVMA--AYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG
        +S+A    PY DPYY  + A     +   +   +G+    + LP +  +EPVFVNAKQY GILRRRQ+RA+ E +NK+IK RKPYLHESRH HA+RR RG
Subjt:  HSIACASNPYQDPYYAGVMA--AYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG

Query:  SGGRF--AKKNETNSLGSTMKDKDS-GSGQAISSHSAGSS
         GGRF  AKK + +   S+ ++K +  +G++  + S+G+S
Subjt:  SGGRF--AKKNETNSLGSTMKDKDS-GSGQAISSHSAGSS

Q8VY64 Nuclear transcription factor Y subunit A-45.0e-2043.71Show/hide
Query:  PYQDPYYAGVMAAYGHQP-GYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF
        PY DPYY  V A   + P  YP      +GM    + L  +  +EPVFVNAKQY GILRRRQ+RAK E  N+ IK +KPY+HESRH HA+RR RG GGRF
Subjt:  PYQDPYYAGVMAAYGHQP-GYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF

Query:  AKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQ
            + N      K+++  +    +S ++ S  SE     LA   +  NG+
Subjt:  AKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQ

Q945M9 Nuclear transcription factor Y subunit A-91.4e-4644.96Show/hide
Query:  MQSKSKS-VNQPESEPPNMQQTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQH
        M SKS S  N+ +SE      +S  S  PW R +   N  S   AG   S S +L     A ESN  +S SN D N  + +     S  S G   +  Q 
Subjt:  MQSKSKS-VNQPESEPPNMQQTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQH

Query:  AVSAAPIVHSGCITQPPQLELVGHSIACA-SNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK
        +      +H G    PP  +LVGH++  A SNPYQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRRRQARAKAE+E K
Subjt:  AVSAAPIVHSGCITQPPQLELVGHSIACA-SNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK

Query:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSS
        LIK RKPYLHESRHQHAMRR RG+GGRFAKK  TN+  S  K ++  +G    S S+ +S          E W                       NG  
Subjt:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSS

Query:  QFHNYSSFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK
        +       Q+S+Y     +R ++G+CSGQQ  S+S N  +Q RLAIK
Subjt:  QFHNYSSFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK

Q9LXV5 Nuclear transcription factor Y subunit A-14.5e-5350.72Show/hide
Query:  MQSKSKSVNQPE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQNNCQH
        MQSK    N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A  S   V N+   
Subjt:  MQSKSKSVNQPE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQNNCQH

Query:  AVSAAPIV---HSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE
            A  +   H   + QPP  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E
Subjt:  AVSAAPIV---HSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE

Query:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS
         K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Subjt:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS

Q9SYH4 Nuclear transcription factor Y subunit A-57.7e-2138.73Show/hide
Query:  GQVQNNCQHAVSAAPIVHSGCITQPPQLELVGHSIACAS----NPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILRR
        G+   N   +++ + +V    +   P    +  S+ CA     N +  P YA    A  H       +G+  +R+ LP  + + EP+FVNAKQY  ILRR
Subjt:  GQVQNNCQHAVSAAPIVHSGCITQPPQLELVGHSIACAS----NPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILRR

Query:  RQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQ--AISSHSAGS
        R+ RAK E +NKLIK RKPYLHESRH HA++RARGSGGRF    +     +++      +GQ  ++S H  GS
Subjt:  RQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQ--AISSHSAGS

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A99.9e-4844.96Show/hide
Query:  MQSKSKS-VNQPESEPPNMQQTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQH
        M SKS S  N+ +SE      +S  S  PW R +   N  S   AG   S S +L     A ESN  +S SN D N  + +     S  S G   +  Q 
Subjt:  MQSKSKS-VNQPESEPPNMQQTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQH

Query:  AVSAAPIVHSGCITQPPQLELVGHSIACA-SNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK
        +      +H G    PP  +LVGH++  A SNPYQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRRRQARAKAE+E K
Subjt:  AVSAAPIVHSGCITQPPQLELVGHSIACA-SNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENK

Query:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSS
        LIK RKPYLHESRHQHAMRR RG+GGRFAKK  TN+  S  K ++  +G    S S+ +S          E W                       NG  
Subjt:  LIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSS

Query:  QFHNYSSFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK
        +       Q+S+Y     +R ++G+CSGQQ  S+S N  +Q RLAIK
Subjt:  QFHNYSSFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK

AT5G12840.1 nuclear factor Y, subunit A13.2e-5450.72Show/hide
Query:  MQSKSKSVNQPE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQNNCQH
        MQSK    N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A  S   V N+   
Subjt:  MQSKSKSVNQPE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQNNCQH

Query:  AVSAAPIV---HSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE
            A  +   H   + QPP  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E
Subjt:  AVSAAPIV---HSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE

Query:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS
         K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Subjt:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS

AT5G12840.2 nuclear factor Y, subunit A14.1e-5449.82Show/hide
Query:  MQSKSKSVNQPE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAV
        MQSK    N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A+     +N  H +
Subjt:  MQSKSKSVNQPE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAV

Query:  S------AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEV
               +   +H   + QPP  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+
Subjt:  S------AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEV

Query:  ENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS
        E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Subjt:  ENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS

AT5G12840.3 nuclear factor Y, subunit A13.2e-5450.72Show/hide
Query:  MQSKSKSVNQPE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQNNCQH
        MQSK    N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A  S   V N+   
Subjt:  MQSKSKSVNQPE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQNNCQH

Query:  AVSAAPIV---HSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE
            A  +   H   + QPP  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E
Subjt:  AVSAAPIV---HSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE

Query:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS
         K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Subjt:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS

AT5G12840.4 nuclear factor Y, subunit A14.1e-5449.82Show/hide
Query:  MQSKSKSVNQPE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAV
        MQSK    N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG SESND  S S D     ++D T KDS A+     +N  H +
Subjt:  MQSKSKSVNQPE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAV

Query:  S------AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEV
               +   +H   + QPP  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+
Subjt:  S------AAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEV

Query:  ENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS
        E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +       +D+G        +  SSGSE       ET NSS
Subjt:  ENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAAGTCTAAAAGTGTGAATCAACCAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCGGAACCTTGGTGGCGTAGTATTGGGTACAATCATAT
CTCCCCGCCAGCAGCCGGAGGAAATGTGTCCAATTCAACATCACTGGAATGCACCAATGGTGCTTCAGAATCTAATGATGGTCAGTCAATGTCAAATGATGATTTAAATG
AAGATGATGATGATGACACCACAAAAGATTCACATGCAAGTTATGGGCAAGTACAGAACAACTGTCAGCATGCTGTTTCTGCTGCACCTATAGTGCATAGTGGATGTATC
ACGCAGCCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTACGCAGGAGTGATGGCTGCCTATGGGCATCAACCGGG
TTACCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCGTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAA
GACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTAATTAAAGTTAGAAAGCCATATCTGCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGA
GGACGATTTGCCAAGAAAAATGAAACTAATTCCTTGGGTTCTACTATGAAGGATAAGGACTCCGGTTCTGGTCAAGCTATCTCATCGCACTCTGCTGGTTCATCTGGTTC
TGAAGCAGCGCACTGTGCCTTGGCCGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGCAAGGACCCAGTTGCATGAGGCATATGAAGCTCGAAGTTATGTGAATGGAA
GTAGCCAATTTCATAATTACAGTAGCTTCCAAGCTTCTTCCTATGGTTTGCGATCTGGTGAGAGAGGCGATGATGGAGACTGCTCGGGACAGCAGCGAAGTATCTCAGAA
AATCAGGCTGCTCAGAGGCGTCTTGCCATCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCAAAGTCTAAAAGTGTGAATCAACCAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCGGAACCTTGGTGGCGTAGTATTGGGTACAATCATAT
CTCCCCGCCAGCAGCCGGAGGAAATGTGTCCAATTCAACATCACTGGAATGCACCAATGGTGCTTCAGAATCTAATGATGGTCAGTCAATGTCAAATGATGATTTAAATG
AAGATGATGATGATGACACCACAAAAGATTCACATGCAAGTTATGGGCAAGTACAGAACAACTGTCAGCATGCTGTTTCTGCTGCACCTATAGTGCATAGTGGATGTATC
ACGCAGCCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTACGCAGGAGTGATGGCTGCCTATGGGCATCAACCGGG
TTACCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCGTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAA
GACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTAATTAAAGTTAGAAAGCCATATCTGCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGA
GGACGATTTGCCAAGAAAAATGAAACTAATTCCTTGGGTTCTACTATGAAGGATAAGGACTCCGGTTCTGGTCAAGCTATCTCATCGCACTCTGCTGGTTCATCTGGTTC
TGAAGCAGCGCACTGTGCCTTGGCCGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGCAAGGACCCAGTTGCATGAGGCATATGAAGCTCGAAGTTATGTGAATGGAA
GTAGCCAATTTCATAATTACAGTAGCTTCCAAGCTTCTTCCTATGGTTTGCGATCTGGTGAGAGAGGCGATGATGGAGACTGCTCGGGACAGCAGCGAAGTATCTCAGAA
AATCAGGCTGCTCAGAGGCGTCTTGCCATCAAGTGA
Protein sequenceShow/hide protein sequence
MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAPIVHSGCI
TQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSG
GRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNYSSFQASSYGLRSGERGDDGDCSGQQRSISE
NQAAQRRLAIK