CuGenDBv2

Gene ID	Pay0011311
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Gag protease polyprotein
Genome location	chr02:4119025..4121025
RNA-Seq Expression	Pay0011311
Synteny	Pay0011311
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0004519 - endonuclease activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR001969 - Aspartic peptidase, active site IPR005162 - Retrotransposon gag domain IPR021109 - Aspartic peptidase domain superfamily IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0032231.1 gag protease polyprotein [Cucumis melo var. makuwa]

0.0e+00

96.85

Show/hide

Query:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP
        MPPRRGARRGGRGGRGRGAG VQPEVQPVAQAPD AAPVTHADLAAMEQRFRDLIMQMREQQKPAS      PAPAPAPAPAPAPAPAPAPVPVAPQFVP
Subjt:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP

Query:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
        DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVFMLTD+GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
Subjt:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL

Query:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
        RDAKRQEFLNLEQGDM VEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQ LVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
Subjt:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA

Query:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK
        EQQPVP PQRNFRS GEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK
Subjt:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK

Query:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN
        AGTVV GTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKE+VKACQIEIAGHVIEVTL+VLDMLDFDVILGMDWLAAN
Subjt:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN

Query:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
        HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEEL GLPPHREVEFAIELEPG
Subjt:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG

Query:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
        TVPISRAPYRMAPA   ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
Subjt:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT

KAA0043391.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.05

Show/hide

Query:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP
        MPPRRGARRGGRGGRGRGAG VQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPT    PA APAPAPAPAPAPAPAPVPVAPQFVP
Subjt:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP

Query:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
        DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTD+GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
Subjt:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL

Query:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
        RDAKRQEFLN+EQG+MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKA
Subjt:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA

Query:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK
        EQQPVP PQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK
Subjt:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK

Query:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN
        AGTVV GTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN
Subjt:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN

Query:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
        HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
Subjt:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG

Query:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
        TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
Subjt:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT

KAA0049635.1 gag protease polyprotein [Cucumis melo var. makuwa]

0.0e+00

96.4

Show/hide

Query:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP
        MPP+RGARRGGRGGRGRGAG VQPEVQPVAQAPDPAAPVTH DLAAMEQRFRDLIMQMREQQK ASPT    PAPAPAPAPAPAPAPAPAPVPVAPQFVP
Subjt:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP

Query:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
        DQLSAEAKHLRDFRKYNPTT DGSLEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVFMLTD+ TAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
Subjt:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL

Query:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
        RDAKRQEFLNLEQ DMTVEQYDA+FDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
Subjt:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA

Query:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK
        EQQPVP PQRNFRSGGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGA APHQGRVFATNKTEAEK
Subjt:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK

Query:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN
        AGTVV GTLPVLGHYALVLFDSGSSH FISSAFV HARLEVEPLHHVLSVSTPS ECMLSKE+VKACQIEIAGHVIEVTL+VLDMLDFDVILGMDWLAAN
Subjt:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN

Query:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
        HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEF+IELEPG
Subjt:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG

Query:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
        TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
Subjt:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT

KAA0054678.1 gag protease polyprotein [Cucumis melo var. makuwa]

0.0e+00

96.55

Show/hide

Query:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP
        MPPRRGARRGGRGGRGRGAG VQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMREQQKPASPT    PAPAPAPAPAP PAPAPAPVPVAPQF+P
Subjt:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP

Query:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
        DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTD+GTA WETTERMLGGDVSQITWQQFKESFYAKFFSASL
Subjt:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL

Query:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
        RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
Subjt:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA

Query:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK
        EQQPVP PQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLR+TG AQNQGAGAPHQGRVFATN+TEAEK
Subjt:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK

Query:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN
        AGTVV GTLPVLGHYALVLFDSGSSHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVI VTLIVLDMLDFDVILGMDWLAAN
Subjt:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN

Query:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
        HASIDCSRKEVTF+PPSMASFKFKGGGSKSLP+VISAIRASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
Subjt:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG

Query:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
        TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK+GSMRLCIDYRELNKVT
Subjt:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT

TYK01613.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

97.6

Show/hide

Query:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP
        MPPRRGARRGGRGGRGRGAG VQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMREQQKPASPT    PAPAPAPAPAP PAPAPAPVPVAPQFVP
Subjt:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP

Query:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
        DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTD+GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
Subjt:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL

Query:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
        RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
Subjt:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA

Query:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK
        EQQPVP PQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTG AQNQGAGAPHQGRVFATN+TEAEK
Subjt:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK

Query:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN
        AGTVV GTLPVLGHYALVLFDSGSSHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN
Subjt:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN

Query:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
        HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
Subjt:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG

Query:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
        TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
Subjt:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SRS1 Gag protease polyprotein

0.0e+00

96.85

Show/hide

Query:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP
        MPPRRGARRGGRGGRGRGAG VQPEVQPVAQAPD AAPVTHADLAAMEQRFRDLIMQMREQQKPAS      PAPAPAPAPAPAPAPAPAPVPVAPQFVP
Subjt:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP

Query:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
        DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVFMLTD+GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
Subjt:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL

Query:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
        RDAKRQEFLNLEQGDM VEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQ LVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
Subjt:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA

Query:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK
        EQQPVP PQRNFRS GEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK
Subjt:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK

Query:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN
        AGTVV GTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKE+VKACQIEIAGHVIEVTL+VLDMLDFDVILGMDWLAAN
Subjt:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN

Query:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
        HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEEL GLPPHREVEFAIELEPG
Subjt:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG

Query:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
        TVPISRAPYRMAPA   ELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
Subjt:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT

A0A5A7TP96 Reverse transcriptase

0.0e+00

98.05

Show/hide

Query:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP
        MPPRRGARRGGRGGRGRGAG VQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPT    PA APAPAPAPAPAPAPAPVPVAPQFVP
Subjt:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP

Query:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
        DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTD+GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
Subjt:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL

Query:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
        RDAKRQEFLN+EQG+MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKA
Subjt:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA

Query:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK
        EQQPVP PQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK
Subjt:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK

Query:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN
        AGTVV GTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN
Subjt:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN

Query:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
        HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
Subjt:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG

Query:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
        TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
Subjt:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT

A0A5A7U7Q0 Gag protease polyprotein

0.0e+00

96.4

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Query:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP
        MPP+RGARRGGRGGRGRGAG VQPEVQPVAQAPDPAAPVTH DLAAMEQRFRDLIMQMREQQK ASPT    PAPAPAPAPAPAPAPAPAPVPVAPQFVP
Subjt:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP

Query:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
        DQLSAEAKHLRDFRKYNPTT DGSLEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVFMLTD+ TAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
Subjt:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL

Query:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
        RDAKRQEFLNLEQ DMTVEQYDA+FDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
Subjt:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA

Query:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK
        EQQPVP PQRNFRSGGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGA APHQGRVFATNKTEAEK
Subjt:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK

Query:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN
        AGTVV GTLPVLGHYALVLFDSGSSH FISSAFV HARLEVEPLHHVLSVSTPS ECMLSKE+VKACQIEIAGHVIEVTL+VLDMLDFDVILGMDWLAAN
Subjt:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN

Query:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
        HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEF+IELEPG
Subjt:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG

Query:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
        TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
Subjt:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT

A0A5A7UI54 Gag protease polyprotein

0.0e+00

96.55

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Query:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP
        MPPRRGARRGGRGGRGRGAG VQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMREQQKPASPT    PAPAPAPAPAP PAPAPAPVPVAPQF+P
Subjt:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP

Query:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
        DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTD+GTA WETTERMLGGDVSQITWQQFKESFYAKFFSASL
Subjt:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL

Query:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
        RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
Subjt:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA

Query:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK
        EQQPVP PQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLR+TG AQNQGAGAPHQGRVFATN+TEAEK
Subjt:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK

Query:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN
        AGTVV GTLPVLGHYALVLFDSGSSHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVI VTLIVLDMLDFDVILGMDWLAAN
Subjt:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN

Query:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
        HASIDCSRKEVTF+PPSMASFKFKGGGSKSLP+VISAIRASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
Subjt:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG

Query:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
        TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKK+GSMRLCIDYRELNKVT
Subjt:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT

A0A5D3BPI1 Reverse transcriptase

0.0e+00

97.6

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Query:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP
        MPPRRGARRGGRGGRGRGAG VQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMREQQKPASPT    PAPAPAPAPAP PAPAPAPVPVAPQFVP
Subjt:  MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVP

Query:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
        DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTD+GTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL
Subjt:  DQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASL

Query:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
        RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA
Subjt:  RDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKA

Query:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK
        EQQPVP PQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTG AQNQGAGAPHQGRVFATN+TEAEK
Subjt:  EQQPVPAPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEK

Query:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN
        AGTVV GTLPVLGHYALVLFDSGSSHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN
Subjt:  AGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAAN

Query:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
        HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG
Subjt:  HASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPG

Query:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
        TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
Subjt:  TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT

SwissProt top hits

e value

%identity

Alignment

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein

1.7e-11

40.62

Show/hide

Query:  YPDVFPEELPGLPP---HREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
        Y ++   +LP  P    +  V+  IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T
Subjt:  YPDVFPEELPGLPP---HREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT

Q99315 Transposon Ty3-G Gag-Pol polyprotein

1.7e-11

40.62

Show/hide

Query:  YPDVFPEELPGLPP---HREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT
        Y ++   +LP  P    +  V+  IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T
Subjt:  YPDVFPEELPGLPP---HREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACACGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGC
GCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATTTGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAG
CGCCAGCTCCAGCGCCAGCTCCAGCACCAGCTCCTGCTCCAGCTCCGGCTCCAGTACCAGTTGCGCCCCAGTTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTG
AGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATG
CCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTTATGTTGACTGACAAAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGTGGTGATGTGAGTCAGATCACGT
GGCAGCAGTTTAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGACGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAG
TATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCCGACTGGACATTCAGGGTTT
GGTCCGAGCTTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGACCGCTGGTAGAGGTTCGACAT
CGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGCGCCACAGCGGAATTTCAGATCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAG
GCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACTTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGA
TAGATGCCCGTTGAGACTCACGGGGAACGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAAAACTGAGGCTGAGAAGGCAGGCACGG
TAGTGATAGGTACGCTCCCAGTGTTGGGGCATTATGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCTTCCGCATTTGTGTTGCATGCCCGCTTAGAG
GTAGAGCCCTTACACCATGTTCTATCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAAGCATGCCAGATTGAGATAGCAGGCCATGTGATTGA
AGTAACGCTGATAGTCCTGGATATGCTCGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTA
ACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGT
ATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCGTCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCC
GCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTAC
AGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGG
GAGTTGAACAAGGTAACGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPPRRGARRGGRGGRGRGAGHVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHL
RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDKGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQ
YDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPAPQRNFRSGGEFRRFQQKPFEAGE
AARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVIGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLE
VEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWG
ILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYR
ELNKVT

Pay0011311 (gene) of Melon (Payzawat) v1 genome