; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0011312 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0011312
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionEukaryotic translation initiation factor 3 subunit M
Genome locationchr12:21298144..21300599
RNA-Seq ExpressionPay0011312
SyntenyPay0011312
Gene Ontology termsGO:0001732 - formation of cytoplasmic translation initiation complex (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016282 - eukaryotic 43S preinitiation complex (cellular component)
GO:0033290 - eukaryotic 48S preinitiation complex (cellular component)
GO:0071541 - eukaryotic translation initiation factor 3 complex, eIF3m (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsIPR000717 - Proteasome component (PCI) domain
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039431.1 eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa]8.7e-5283.8Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGV---------TC---------
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIK           TC         
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGV---------TC---------

Query:  --VLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVRR
          VLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV R
Subjt:  --VLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVRR

KAA0053298.1 eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucumis melo var. makuwa]9.6e-5999.19Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVRRY
        AITSKLIDCKMDQMNEVVIV RY
Subjt:  AITSKLIDCKMDQMNEVVIVRRY

TYK00620.1 eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa]1.9e-5192.62Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIK        LQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVRR
        AITSKLIDCKMDQMNEVVIV R
Subjt:  AITSKLIDCKMDQMNEVVIVRR

XP_008467080.1 PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X2 [Cucumis melo]9.6e-5999.19Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVRRY
        AITSKLIDCKMDQMNEVVIV RY
Subjt:  AITSKLIDCKMDQMNEVVIVRRY

XP_016903699.1 PREDICTED: eukaryotic translation initiation factor 3 subunit M-like isoform X1 [Cucumis melo]4.8e-58100Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVR
        AITSKLIDCKMDQMNEVVIVR
Subjt:  AITSKLIDCKMDQMNEVVIVR

TrEMBL top hitse value%identityAlignment
A0A1S3CSW1 eukaryotic translation initiation factor 3 subunit M-like isoform X24.7e-5999.19Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVRRY
        AITSKLIDCKMDQMNEVVIV RY
Subjt:  AITSKLIDCKMDQMNEVVIVRRY

A0A1S4E653 eukaryotic translation initiation factor 3 subunit M-like isoform X12.3e-58100Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVR
        AITSKLIDCKMDQMNEVVIVR
Subjt:  AITSKLIDCKMDQMNEVVIVR

A0A5A7TCS8 Eukaryotic translation initiation factor 3 subunit M4.2e-5283.8Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGV---------TC---------
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIK           TC         
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGV---------TC---------

Query:  --VLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVRR
          VLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIV R
Subjt:  --VLLVLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVRR

A0A5A7UE08 Eukaryotic translation initiation factor 3 subunit M-like isoform X24.7e-5999.19Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVRRY
        AITSKLIDCKMDQMNEVVIV RY
Subjt:  AITSKLIDCKMDQMNEVVIVRRY

A0A5D3BNN4 Eukaryotic translation initiation factor 3 subunit M9.4e-5292.62Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIK        LQINDDEVELWVVK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVRR
        AITSKLIDCKMDQMNEVVIV R
Subjt:  AITSKLIDCKMDQMNEVVIVRR

SwissProt top hitse value%identityAlignment
B3NRC6 Eukaryotic translation initiation factor 3 subunit M5.0e-1035.58Show/hide
Query:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM
        L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +        L K        LQIN+DEVE +V++ + +KL+  ++DQ 
Subjt:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM

Query:  NEVV
        N  V
Subjt:  NEVV

B4HR14 Eukaryotic translation initiation factor 3 subunit M2.9e-1035.58Show/hide
Query:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM
        L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +        L K        LQIN+DEVE +V++ + +KL+  ++DQ 
Subjt:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM

Query:  NEVV
        N+ V
Subjt:  NEVV

B4QFD2 Eukaryotic translation initiation factor 3 subunit M2.9e-1035.58Show/hide
Query:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM
        L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +        L K        LQIN+DEVE +V++ + +KL+  ++DQ 
Subjt:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM

Query:  NEVV
        N+ V
Subjt:  NEVV

Q54KZ8 Eukaryotic translation initiation factor 3 subunit M2.4e-2042.62Show/hide
Query:  MPAVGQLEKD--AKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWV
        +PAV  LE    +  SL Y+L+KIF T++LD++++FQ  N + L + GL ++DC+ K+RLLSL  L ++E +++PY+LI        +LQI+++EVE+WV
Subjt:  MPAVGQLEKD--AKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWV

Query:  VKAITSKLIDCKMDQMNEVVIV
        + A+   L+D K+DQ+N +V V
Subjt:  VKAITSKLIDCKMDQMNEVVIV

Q7JVI3 Eukaryotic translation initiation factor 3 subunit M2.9e-1035.58Show/hide
Query:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM
        L++ LL IF++++L AY++F   +   + S GL HE  + KMRLL+ + L  +        L K        LQIN+DEVE +V++ + +KL+  ++DQ 
Subjt:  LVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCKMDQM

Query:  NEVV
        N+ V
Subjt:  NEVV

Arabidopsis top hitse value%identityAlignment
AT3G02200.1 Proteasome component (PCI) domain protein1.5e-4168.85Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        +PAV QLEKDAKY+ VYQLLKIFLTQRL+AY EFQ ANS  L+SYGL +EDC+ KMRLLSLVDL S+ES +IPY  IK        LQ+N+ +VELW+VK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVRR
        AIT+KLI+CKMDQMN+V+IVR+
Subjt:  AITSKLIDCKMDQMNEVVIVRR

AT3G02200.2 Proteasome component (PCI) domain protein1.1e-4168Show/hide
Query:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK
        +PAV QLEKDAKY+ VYQLLKIFLTQRL+AY EFQ ANS  L+SYGL +EDC+ KMRLLSLVDL S+ES +IPY  IK        LQ+N+ +VELW+VK
Subjt:  MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVK

Query:  AITSKLIDCKMDQMNEVVIVRRYQE
        AIT+KLI+CKMDQMN+V+IV R  E
Subjt:  AITSKLIDCKMDQMNEVVIVRRYQE

AT5G15610.1 Proteasome component (PCI) domain protein3.0e-4271.9Show/hide
Query:  PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKA
        PAV QLEKD   + VYQLLKIFLTQRLDAYMEFQ ANS  L++YGLV EDC+AKMRLLSLVDL S++S +IPYA IK        LQ+ND+EVELWVVKA
Subjt:  PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKA

Query:  ITSKLIDCKMDQMNEVVIVRR
        IT+KL+ CKMDQMN+VVIVR+
Subjt:  ITSKLIDCKMDQMNEVVIVRR

AT5G15610.2 Proteasome component (PCI) domain protein3.0e-4270.97Show/hide
Query:  PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKA
        PAV QLEKD   + VYQLLKIFLTQRLDAYMEFQ ANS  L++YGLV EDC+AKMRLLSLVDL S++S +IPYA IK        LQ+ND+EVELWVVKA
Subjt:  PAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKA

Query:  ITSKLIDCKMDQMNEVVIVRRYQE
        IT+KL+ CKMDQMN+VVIV R  E
Subjt:  ITSKLIDCKMDQMNEVVIVRRYQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTTTGACCCAGAGATTGGATGCTTACATGGAATTTCAAGCTGC
AAATTCTTCTTTATTGAAAAGCTATGGTCTCGTCCATGAAGATTGCATTGCAAAGATGAGGTTATTATCATTGGTAGATCTTGGCTCAAATGAATCTGCCCGTATTCCAT
ATGCTCTCATCAAGGGTGTTACTTGTGTGTTACTTGTGCTTCAGATCAATGATGATGAGGTCGAACTGTGGGTCGTGAAGGCCATTACGTCCAAATTGATTGACTGCAAA
ATGGACCAGATGAACGAAGTTGTGATTGTGAGACGTTATCAAGAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTTTGACCCAGAGATTGGATGCTTACATGGAATTTCAAGCTGC
AAATTCTTCTTTATTGAAAAGCTATGGTCTCGTCCATGAAGATTGCATTGCAAAGATGAGGTTATTATCATTGGTAGATCTTGGCTCAAATGAATCTGCCCGTATTCCAT
ATGCTCTCATCAAGGGTGTTACTTGTGTGTTACTTGTGCTTCAGATCAATGATGATGAGGTCGAACTGTGGGTCGTGAAGGCCATTACGTCCAAATTGATTGACTGCAAA
ATGGACCAGATGAACGAAGTTGTGATTGTGAGACGTTATCAAGAGAATTGA
Protein sequenceShow/hide protein sequence
MPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKGVTCVLLVLQINDDEVELWVVKAITSKLIDCK
MDQMNEVVIVRRYQEN