CuGenDBv2

Gene ID	Pay0011319
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase Ty1/copia-type domain-containing protein
Genome location	chr10:12403324..12404450
RNA-Seq Expression	Pay0011319
Synteny	Pay0011319
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAF7119794.1 hypothetical protein RHSIM_Rhsim13G0158900 [Rhododendron simsii]

6.3e-80

64.04

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Query:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL
        MSMMGEL++FLGLQIKQ  DGIFI+Q KY +D                  T+TKLDK E GK  D K YRGMIGSLLYLTASRPDIMFSV LCARFQ   
Subjt:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL

Query:  KESHLYAVKRILKYLLET----------IDFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-
        KESH  AVKRI KYL+ T             +L+GYSDADF G  +DRKSTSGTCQFLG S+VSWFSKKQ+SVALST EAEY+AV SCCAQILWMKQ L 
Subjt:  KESHLYAVKRILKYLLET----------IDFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-

Query:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK
         +G              AINLTKNPI HSRTKHIDIRHHFIR+HVQ G +  +FV ++NQLADIFTK
Subjt:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK

KAG8633904.1 hypothetical protein MANES_18G147001v8 [Manihot esculenta]

1.0e-82

65.17

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Query:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL
        MSMMGEL FFLGLQIKQ KDGIFI+Q KYT++                  T TKLDK EKGK +D K YRGMIGSLLYLTASRPDIMFSV LCARFQ C 
Subjt:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL

Query:  KESHLYAVKRILKYLLETI----------DFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTLW
        KESHL+AVKRIL+YL  T+           F+L  YSDADF GS+LDRKSTSGTCQ LG S+VSW SKKQNSVALST EAEY+A   CC+QILW+KQ L 
Subjt:  KESHLYAVKRILKYLLETI----------DFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTLW

Query:  GRL-----------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK
                         AINLTKNPI HSRTKHIDIRHHFIR+HV NG +  EFV++NNQLADIFTK
Subjt:  GRL-----------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK

KYP56106.1 Copia protein [Cajanus cajan]

2.2e-77

61.8

Show/hide

Query:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL
        MSMMGEL+FFLGLQI+Q K+GIFI+Q KY ++                  TT  LDK E GK +D+K YRGMIGSLLYL+ASRPDIMFSV LCAR+Q   
Subjt:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL

Query:  KESHLYAVKRILKYLLET----------IDFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-
        KESHL AVKRI++YLL T          + FNLVGYSD+DF G   DRKSTSGTC F+GS++VSW SKKQNSVALST EAEYIA  SCCAQILWMKQ L 
Subjt:  KESHLYAVKRILKYLLET----------IDFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-

Query:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK
         +G              AINL+KNP+ HSRTKHI+IRHHF+R+HVQ G    EFV + NQLADIFTK
Subjt:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK

XP_020113283.1 uncharacterized protein LOC109727552, partial [Ananas comosus]

4.3e-81

64.04

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Query:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL
        MSMMGELSFFLGLQ+KQ+KDGIFI+Q KY +D                   +TKLDK EKGK VDIK YRGMIGSLLYLTASRPDIMFSV LCA+FQ   
Subjt:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL

Query:  KESHLYAVKRILKYLLETI----------DFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-
        KESHL AVKRIL+Y+  T+          +FNL+G+SDADF G  +DRKSTSGTCQFLG S+VSW SKKQNSVALST EAEYIA   CCAQ+LWMKQTL 
Subjt:  KESHLYAVKRILKYLLETI----------DFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-

Query:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK
         +G              AIN++KNPI HSRTKHI+IRHHFIR+H+Q   +T EFV++ NQLADIFTK
Subjt:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK

XP_038988583.1 uncharacterized protein LOC120112770, partial [Phoenix dactylifera]

1.3e-77

60.67

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Query:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL
        MSMMGEL+FFLGLQIKQ ++GIFISQ KY ++                  ++ KLDK EKGK +D K YRGMIGSLLYLTASRPDI+FSV +CAR+Q C 
Subjt:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL

Query:  KESHLYAVKRILKYLLET----------IDFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-
        KESHL AVKRI +YL+ T           D NL+ YSDADF G  LDRKSTSGTCQFLG+++VSWFSKKQNSVALST EAEYIA  SCCAQ+LW+KQ L 
Subjt:  KESHLYAVKRILKYLLET----------IDFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-

Query:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK
         +G              AINLTKNP+ HS++KHI+IRHHFIR+HV    +  E+V + NQLADIFTK
Subjt:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK

TrEMBL top hits

e value

%identity

Alignment

A0A151QU14 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.4e-77

61.42

Show/hide

Query:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL
        MSMMGEL+FFLGLQI+Q K+GIFI+Q KY ++                  TT  LDK E GK +D+K YRGMIGSLLYL+ASRPDIMFSV  CAR+Q   
Subjt:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL

Query:  KESHLYAVKRILKYLLET----------IDFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-
        KESHL AVKRI++YLL T          + FNLVGYSD+DF G   DRKSTSGTC F+GS++VSW SKKQNSVALST EAEYIA  SCCAQILWMKQ L 
Subjt:  KESHLYAVKRILKYLLET----------IDFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-

Query:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK
         +G              AINL+KNP+ HSRTKHI+IRHHF+R+HVQ G    EFV + NQLADIFTK
Subjt:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK

A0A151SK19 Copia protein

1.4e-77

61.42

Show/hide

Query:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL
        MSM+GEL+FF+GLQI+Q K+GIFI+Q KY ++F                 TT  LDK E GK +D+K YRGMIGSLLYL+ASRPDIMFSV LCAR+Q   
Subjt:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL

Query:  KESHLYAVKRILKYLLET----------IDFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-
        KESHL AVKRI++YLL T          + FNLVGYSD+DF G   DRKSTSGTC F+GS++VSW SKKQNSVALST EAEYIA  SCCAQILWMKQ L 
Subjt:  KESHLYAVKRILKYLLET----------IDFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-

Query:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK
         +G              AINL+KNP+ HSRTKHI+IRHHF+R+HVQ G    EFV + NQLADIFTK
Subjt:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK

A0A151SMP1 Copia protein

1.1e-77

61.8

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Query:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL
        MSMMGEL+FFLGLQI+Q K+GIFI+Q KY ++                  TT  LDK E GK +D+K YRGMIGSLLYL+ASRPDIMFSV LCAR+Q   
Subjt:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL

Query:  KESHLYAVKRILKYLLET----------IDFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-
        KESHL AVKRI++YLL T          + FNLVGYSD+DF G   DRKSTSGTC F+GS++VSW SKKQNSVALST EAEYIA  SCCAQILWMKQ L 
Subjt:  KESHLYAVKRILKYLLET----------IDFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-

Query:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK
         +G              AINL+KNP+ HSRTKHI+IRHHF+R+HVQ G    EFV + NQLADIFTK
Subjt:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK

A0A2N9G065 Reverse transcriptase Ty1/copia-type domain-containing protein

1.8e-77

61.8

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Query:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL
        MSMMGEL FFLGLQIKQ +DGIF++Q KY  D                   +TKLDK EKGK VD+K YRGMIGSLLYLTASRPDIMFSV LCARFQ C 
Subjt:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL

Query:  KESHLYAVKRILKYLLETID----------FNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQ---
        KESHL AVKRI +YLL TID          F+L+ Y+DADF G  +DRKSTSGTC FLG S+VSWFSKKQNSVALST EAEY+A  SCCAQ L++KQ   
Subjt:  KESHLYAVKRILKYLLETID----------FNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQ---

Query:  ---TLWGRL-----GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK
            L+  +        AI+L+KNPI HSRTKHI+IR+HFIR+HVQ G I  EFV++++Q ADI TK
Subjt:  ---TLWGRL-----GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK

A0A6P5HB69 uncharacterized protein LOC109727552

2.1e-81

64.04

Show/hide

Query:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL
        MSMMGELSFFLGLQ+KQ+KDGIFI+Q KY +D                   +TKLDK EKGK VDIK YRGMIGSLLYLTASRPDIMFSV LCA+FQ   
Subjt:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCL

Query:  KESHLYAVKRILKYLLETI----------DFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-
        KESHL AVKRIL+Y+  T+          +FNL+G+SDADF G  +DRKSTSGTCQFLG S+VSW SKKQNSVALST EAEYIA   CCAQ+LWMKQTL 
Subjt:  KESHLYAVKRILKYLLETI----------DFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTL-

Query:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK
         +G              AIN++KNPI HSRTKHI+IRHHFIR+H+Q   +T EFV++ NQLADIFTK
Subjt:  -WGRL---------GEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

1.7e-32

33.09

Show/hide

Query:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDFTTTKLDKYEKGKCVDIKT--------------------YRGMIGSLLY-LTASRPDIMFSVYLCARF
        M+ + E+  F+G++I+  +D I++SQ  Y +      L K+    C  + T                     R +IG L+Y +  +RPD+  +V + +R+
Subjt:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDFTTTKLDKYEKGKCVDIKT--------------------YRGMIGSLLY-LTASRPDIMFSVYLCARF

Query:  QCCLKESHLYAVKRILKYLLETIDFNL------------VGYSDADFVGSLLDRKSTSG-TCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQIL
                   +KR+L+YL  TID  L            +GY D+D+ GS +DRKST+G   +    +++ W +K+QNSVA S+ EAEY+A+     + L
Subjt:  QCCLKESHLYAVKRILKYLLETIDFNL------------VGYSDADFVGSLLDRKSTSG-TCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQIL

Query:  WMKQTLWG------------RLGEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK
        W+K  L                 +G I++  NP  H R KHIDI++HF RE VQN  I  E++ + NQLADIFTK
Subjt:  WMKQTLWG------------RLGEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

3.2e-26

38.1

Show/hide

Query:  EKGKCVDIKTYRGMIGSLLY-LTASRPDIMFSVYLCARFQCCLKESHLYAVKRILKYLLETI---------DFNLVGYSDADFVGSLLDRKSTSGTCQFL
        EKG    +  Y   +GSL+Y +  +RPDI  +V + +RF     + H  AVK IL+YL  T          D  L GY+DAD  G + +RKS++G     
Subjt:  EKGKCVDIKTYRGMIGSLLY-LTASRPDIMFSVYLCARFQCCLKESHLYAVKRILKYLLETI---------DFNLVGYSDADFVGSLLDRKSTSGTCQFL

Query:  GSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTLWGRLG------------EGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNS
            +SW SK Q  VALST EAEYIA      +++W+K+ L   LG            + AI+L+KN ++H+RTKHID+R+H+IRE V +  +    +++
Subjt:  GSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTLWGRLG------------EGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNS

Query:  NNQLADIFTK
        N   AD+ TK
Subjt:  NNQLADIFTK

P92519 Uncharacterized mitochondrial protein AtMg00810

2.2e-19

32.82

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Query:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDFTTT---------------KLD-KYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSV-YLCARF-QCC
        M  +G + +FLG+QIK    G+F+SQ KY                      KL+      K  D   +R ++G+L YLT +RPDI ++V  +C R  +  
Subjt:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDFTTT---------------KLD-KYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSV-YLCARF-QCC

Query:  LKESHLYAVKRILKYLLETI----------DFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILW
        L +  L  +KR+L+Y+  TI            N+  + D+D+ G    R+ST+G C FLG +++SW +K+Q +V+ S+ E EY A+A   A++ W
Subjt:  LKESHLYAVKRILKYLLETI----------DFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

1.4e-34

37.12

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Query:  ELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCLKESHL
        EL +FLG++ K++  G+ +SQ +Y  D                   + KL  Y   K  D   YRG++GSL YL  +RPDI ++V   ++F     E HL
Subjt:  ELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCLKESHL

Query:  YAVKRILKYLLETID----------FNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTLWGRLG-
         A+KRIL+YL  T +           +L  YSDAD+ G   D  ST+G   +LG   +SW SKKQ  V  S+ EAEY +VA+  +++ W+  +L   LG 
Subjt:  YAVKRILKYLLETID----------FNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTLWGRLG-

Query:  ------------EGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK
                     GA  L  NP+ HSR KHI I +HFIR  VQ+G +    V++++QLAD  TK
Subjt:  ------------EGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

1.6e-33

35.23

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Query:  ELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCLKESHL
        +L +FLG++ K++  G+ +SQ +YT D                  T+ KL  +   K  D   YRG++GSL YL  +RPD+ ++V   +++     + H 
Subjt:  ELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCLKESHL

Query:  YAVKRILKYLLETID----------FNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTLWGRLG-
         A+KR+L+YL  T D           +L  YSDAD+ G   D  ST+G   +LG   +SW SKKQ  V  S+ EAEY +VA+  +++ W+  +L   LG 
Subjt:  YAVKRILKYLLETID----------FNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTLWGRLG-

Query:  ------------EGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK
                     GA  L  NP+ HSR KHI + +HFIR  VQ+G +    V++++QLAD  TK
Subjt:  ------------EGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSNNQLADIFTK

Arabidopsis top hits

e value

%identity

Alignment

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8

2.2e-27

33.61

Show/hide

Query:  MGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCLKES
        +G L +FLGL+I +   GI I Q KY  D                   +     +  G  VD K YR +IG L+YL  +R DI F+V   ++F    + +
Subjt:  MGELSFFLGLQIKQLKDGIFISQEKYTRDF-----------------TTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCLKES

Query:  HLYAVKRILKYLLETI----------DFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWM--------
        H  AV +IL Y+  T+          +  L  +SDA F      R+ST+G C FLG+S++SW SKKQ  V+ S+ EAEY A++    +++W+        
Subjt:  HLYAVKRILKYLLETI----------DFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWM--------

Query:  ----KQTLWGRLGEGAINLTKNPIHHSRTKHIDIRHHFIRE
            K TL       AI++  N + H RTKHI+   H +RE
Subjt:  ----KQTLWGRLGEGAINLTKNPIHHSRTKHIDIRHHFIRE

ATMG00810.1 DNA/RNA polymerases superfamily protein

1.6e-20

32.82

Show/hide

Query:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDFTTT---------------KLD-KYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSV-YLCARF-QCC
        M  +G + +FLG+QIK    G+F+SQ KY                      KL+      K  D   +R ++G+L YLT +RPDI ++V  +C R  +  
Subjt:  MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDFTTT---------------KLD-KYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSV-YLCARF-QCC

Query:  LKESHLYAVKRILKYLLETI----------DFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILW
        L +  L  +KR+L+Y+  TI            N+  + D+D+ G    R+ST+G C FLG +++SW +K+Q +V+ S+ E EY A+A   A++ W
Subjt:  LKESHLYAVKRILKYLLETI----------DFNLVGYSDADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGTATGATGGGAGAACTTAGTTTCTTCCTTGGTCTTCAAATCAAACAACTCAAGGATGGCATCTTCATAAGTCAAGAAAAATACACAAGGGATTTCACTACCACTAA
GCTTGACAAATATGAAAAAGGTAAATGTGTGGATATAAAGACTTATCGAGGTATGATCGGATCCTTACTTTATTTGACCGCTAGTAGACCTGATATCATGTTTAGTGTAT
ATCTTTGTGCTAGATTTCAATGTTGTCTTAAAGAATCACATTTGTATGCCGTTAAAAGGATACTTAAATATTTGCTTGAAACTATTGATTTTAATTTGGTAGGATATTCT
GATGCGGATTTTGTCGGTAGTTTACTTGATCGTAAAAGTACTAGTGGGACTTGCCAATTTCTTGGTAGTTCCGTAGTATCTTGGTTTAGTAAAAAGCAAAATTCAGTTGC
TTTATCCACTGTCGAAGCGGAATATATTGCAGTTGCTAGTTGTTGTGCACAAATTCTTTGGATGAAACAAACTCTTTGGGGGCGTTTGGGGGAAGGTGCCATCAATTTGA
CTAAGAATCCTATACATCATTCTAGAACTAAACATATTGATATTAGACATCACTTTATTAGAGAGCATGTGCAAAATGGTCATATTACTTCTGAGTTTGTGAACTCTAAT
AATCAATTAGCGGATATATTTACAAAGACATTTGAATGA

mRNA sequence

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Protein sequence

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MSMMGELSFFLGLQIKQLKDGIFISQEKYTRDFTTTKLDKYEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVYLCARFQCCLKESHLYAVKRILKYLLETIDFNLVGYS
DADFVGSLLDRKSTSGTCQFLGSSVVSWFSKKQNSVALSTVEAEYIAVASCCAQILWMKQTLWGRLGEGAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITSEFVNSN
NQLADIFTKTFE

Pay0011319 (gene) of Melon (Payzawat) v1 genome