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Pay0011399 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0011399
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionE3 ubiquitin-protein ligase RNF34
Genome locationchr06:34190009..34192181
RNA-Seq ExpressionPay0011399
SyntenyPay0011399
Gene Ontology termsGO:0000492 - box C/D snoRNP assembly (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0062064 - box C/D snoRNP complex binding (molecular function)
InterPro domainsIPR027921 - NOP protein chaperone 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147238.2 uncharacterized protein LOC101206707 isoform X2 [Cucumis sativus]1.5e-9094.06Show/hide
Query:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM
        MRH SKDLL+LERKDLS+SSLESSLLVCKKNSTSK+P RNE+PITEPASKSLVLGRV+DFLGVISEANKKLQMDSKENA+KYDIEALDGNESEVIQLDLM
Subjt:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM

Query:  LGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQV
        LGIADLHTPEAV AAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDN+DNEKSDDQ TDCSNRLSVKLKRSNSRK SCRSKSKGKGKSKKRPKIQV
Subjt:  LGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQV

Query:  LS
        LS
Subjt:  LS

XP_008448773.1 PREDICTED: uncharacterized protein LOC103490838 [Cucumis melo]6.4e-9799.5Show/hide
Query:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM
        MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNE+PITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM
Subjt:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM

Query:  LGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQV
        LGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQV
Subjt:  LGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQV

Query:  LS
        LS
Subjt:  LS

XP_011650372.1 uncharacterized protein LOC101206707 isoform X1 [Cucumis sativus]8.4e-8992.23Show/hide
Query:  MRHASKDLLHLERKDLSTSSL----ESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQ
        MRH SKDLL+LERKDLS+SSL    ESSLLVCKKNSTSK+P RNE+PITEPASKSLVLGRV+DFLGVISEANKKLQMDSKENA+KYDIEALDGNESEVIQ
Subjt:  MRHASKDLLHLERKDLSTSSL----ESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQ

Query:  LDLMLGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRP
        LDLMLGIADLHTPEAV AAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDN+DNEKSDDQ TDCSNRLSVKLKRSNSRK SCRSKSKGKGKSKKRP
Subjt:  LDLMLGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRP

Query:  KIQVLS
        KIQVLS
Subjt:  KIQVLS

XP_023005549.1 uncharacterized protein LOC111498503 isoform X1 [Cucurbita maxima]1.6e-7682.52Show/hide
Query:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM
        MRHASKDLL LERKDL +SSLESSLLVCKKNSTSKEPCRNE+PITEPA KS VLGRV+DFLGV+SEANKKLQ+D+K++A+KYDIEAL+GNESEVI+LDLM
Subjt:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM

Query:  LGIADLHTPEAVAAAESAIIGNHPVIPLTC----SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRP
        LGIADLHTPEAVAAAESAIIGN PVIPL C    SSSESESEESSDDSITSD+++NDNEKSD QNTD  NRLSVKLKRS SR+A+CRS+S+ KGKS KRP
Subjt:  LGIADLHTPEAVAAAESAIIGNHPVIPLTC----SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRP

Query:  KIQVLS
        KI  LS
Subjt:  KIQVLS

XP_038903017.1 uncharacterized protein LOC120089721 [Benincasa hispida]9.3e-8088.18Show/hide
Query:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM
        MRH SKDLL+LERKDLS+SSLESSLLVCKKNSTSKEP RNE+PITEPASKSLVLGRV+DFLGVISEANKKLQMD+K+NA+KYDIEALDGNES+VI+LDLM
Subjt:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM

Query:  LGIADLHTPEAVAAAESAIIGNHPVIPLTC-SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQ
        LGIADLHTPEAVAAAESAIIGN PVIPLTC SSSESESEESSDDSITS+ +N+DNEKSDDQNTD SNR SVKLKRSNSRK SCRSKSKGK KS+KRPKI 
Subjt:  LGIADLHTPEAVAAAESAIIGNHPVIPLTC-SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQ

Query:  VLS
         LS
Subjt:  VLS

TrEMBL top hitse value%identityAlignment
A0A0A0L448 Uncharacterized protein7.4e-9194.06Show/hide
Query:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM
        MRH SKDLL+LERKDLS+SSLESSLLVCKKNSTSK+P RNE+PITEPASKSLVLGRV+DFLGVISEANKKLQMDSKENA+KYDIEALDGNESEVIQLDLM
Subjt:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM

Query:  LGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQV
        LGIADLHTPEAV AAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDN+DNEKSDDQ TDCSNRLSVKLKRSNSRK SCRSKSKGKGKSKKRPKIQV
Subjt:  LGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQV

Query:  LS
        LS
Subjt:  LS

A0A1S3BJW4 uncharacterized protein LOC1034908383.1e-9799.5Show/hide
Query:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM
        MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNE+PITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM
Subjt:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM

Query:  LGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQV
        LGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQV
Subjt:  LGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQV

Query:  LS
        LS
Subjt:  LS

A0A5D3CJH5 E3 ubiquitin-protein ligase RNF343.1e-9799.5Show/hide
Query:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM
        MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNE+PITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM
Subjt:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM

Query:  LGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQV
        LGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQV
Subjt:  LGIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQV

Query:  LS
        LS
Subjt:  LS

A0A6J1F913 uncharacterized protein LOC111443185 isoform X13.7e-7480.98Show/hide
Query:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM
        MRHASKDLL LERKDL +SS ESSLLVCKKNSTSKEPCRNE+PITEPA KS VLGRV+DFLGV+SEANKKLQ+D+K++A+KYDIEAL+G+ESEVI+LDLM
Subjt:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM

Query:  LGIADLHTPEAVAAAESAIIGNHPVIPLTCSSS---ESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPK
        LGIADLHTPEAVAAAESAIIGN PVI L CSSS   ESESEESSDDSITSD++++DNEKSD+QNTD  NRLSVKLKR  SRK +CRS+SK KGKS KRPK
Subjt:  LGIADLHTPEAVAAAESAIIGNHPVIPLTCSSS---ESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPK

Query:  IQVLS
        I  LS
Subjt:  IQVLS

A0A6J1KZJ8 uncharacterized protein LOC111498503 isoform X17.9e-7782.52Show/hide
Query:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM
        MRHASKDLL LERKDL +SSLESSLLVCKKNSTSKEPCRNE+PITEPA KS VLGRV+DFLGV+SEANKKLQ+D+K++A+KYDIEAL+GNESEVI+LDLM
Subjt:  MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLM

Query:  LGIADLHTPEAVAAAESAIIGNHPVIPLTC----SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRP
        LGIADLHTPEAVAAAESAIIGN PVIPL C    SSSESESEESSDDSITSD+++NDNEKSD QNTD  NRLSVKLKRS SR+A+CRS+S+ KGKS KRP
Subjt:  LGIADLHTPEAVAAAESAIIGNHPVIPLTC----SSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRP

Query:  KIQVLS
        KI  LS
Subjt:  KIQVLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71430.1 unknown protein9.4e-2244.05Show/hide
Query:  KDLLHLERKDLSTSS-LESSLLVC---KKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLML
        KDLL LE K+ S+SS ++S+LL+C    K     E     +P   P  KS +LG+++ FLGV++EANKK    S+ N + Y+IEAL GNESE+I++DLML
Subjt:  KDLLHLERKDLSTSS-LESSLLVC---KKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLML

Query:  GIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLS
        G+ADL+TPEAV+AAE+AI G  P          +ES +SS D    D  ++++E  + ++ +CS + S
Subjt:  GIADLHTPEAVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCATGCTAGCAAGGATCTTCTGCATTTGGAGCGGAAGGATTTATCCACTTCATCTTTAGAATCTTCACTGCTAGTTTGTAAAAAAAACTCAACATCCAAGGAGCC
TTGTCGGAATGAAAGACCCATTACAGAACCCGCTTCAAAAAGCTTAGTATTGGGAAGAGTCCAAGACTTTTTGGGAGTAATATCAGAAGCTAATAAAAAGCTGCAAATGG
ATTCAAAGGAAAATGCTGATAAATATGATATCGAAGCCCTCGATGGCAATGAATCAGAAGTGATTCAATTGGACCTGATGTTGGGTATTGCTGATCTTCACACTCCTGAA
GCTGTGGCTGCTGCTGAATCTGCAATAATTGGCAATCACCCTGTAATTCCATTGACTTGTAGTAGTAGCGAGTCAGAGTCTGAAGAGAGTAGTGATGATAGTATTACCAG
TGATCACGATAACAATGACAATGAAAAGAGCGATGATCAGAATACTGACTGCAGTAACAGATTGTCAGTTAAACTCAAAAGATCGAATTCTAGAAAAGCAAGCTGTAGAA
GTAAAAGCAAAGGAAAAGGTAAATCAAAGAAGCGACCAAAGATTCAAGTGCTCTCTTAA
mRNA sequenceShow/hide mRNA sequence
AGTTTCCGCAGACCCATTACTTTTCTTAAACCCTACTTCACGCGTTCAGCCATTGCGTATCCAACCTGACGCCGTCCCAGTGGGTGCCGGAAGCCTTCCGACGTCTATTC
AACTCTCCCTTCCTTCCTCACAGTCGCCGGAAAAGTGCTTCCGGCTGCTGCTTTCACGGCCGACGCCCGACCTTTGCTGTTGTGACTAGCTAGAAGAAGGGAAAGATGCG
GCATGCTAGCAAGGATCTTCTGCATTTGGAGCGGAAGGATTTATCCACTTCATCTTTAGAATCTTCACTGCTAGTTTGTAAAAAAAACTCAACATCCAAGGAGCCTTGTC
GGAATGAAAGACCCATTACAGAACCCGCTTCAAAAAGCTTAGTATTGGGAAGAGTCCAAGACTTTTTGGGAGTAATATCAGAAGCTAATAAAAAGCTGCAAATGGATTCA
AAGGAAAATGCTGATAAATATGATATCGAAGCCCTCGATGGCAATGAATCAGAAGTGATTCAATTGGACCTGATGTTGGGTATTGCTGATCTTCACACTCCTGAAGCTGT
GGCTGCTGCTGAATCTGCAATAATTGGCAATCACCCTGTAATTCCATTGACTTGTAGTAGTAGCGAGTCAGAGTCTGAAGAGAGTAGTGATGATAGTATTACCAGTGATC
ACGATAACAATGACAATGAAAAGAGCGATGATCAGAATACTGACTGCAGTAACAGATTGTCAGTTAAACTCAAAAGATCGAATTCTAGAAAAGCAAGCTGTAGAAGTAAA
AGCAAAGGAAAAGGTAAATCAAAGAAGCGACCAAAGATTCAAGTGCTCTCTTAAGATGATCCATCTTCTGATCAGACCTGTTTGCGTCAATATGGATGCATTGTGGTTTG
AAAGTTTCTGTTCATGCTCGATGTCGTTG
Protein sequenceShow/hide protein sequence
MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNERPITEPASKSLVLGRVQDFLGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPE
AVAAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKASCRSKSKGKGKSKKRPKIQVLS