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Pay0011516 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0011516
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionhelicase sen1-like
Genome locationchr07:11825115..11826427
RNA-Seq ExpressionPay0011516
SyntenyPay0011516
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591752.1 hypothetical protein SDJN03_14098, partial [Cucurbita argyrosperma subsp. sororia]5.3e-0575Show/hide
Query:  DSRTTHKLRFKVYWSHILFKFGIGDNCINRDC
        DSR+ HKLR KVYW+ ILFK   GDNCINRDC
Subjt:  DSRTTHKLRFKVYWSHILFKFGIGDNCINRDC

KAG7024634.1 SPBC29A10.10c, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-0853.62Show/hide
Query:  SLLLALTLKSKSFLFFSLSLSLSLSHISLSLSTYAFKDSRTTHKLRFKVYWSHILFKFGIGDNCINRDC
        +  LAL             L L    +SLS+S YAFKDSR+ HKLR KVYW+ ILFK   GDNCINRDC
Subjt:  SLLLALTLKSKSFLFFSLSLSLSLSHISLSLSTYAFKDSRTTHKLRFKVYWSHILFKFGIGDNCINRDC

XP_022940568.1 helicase sen1-like [Cucurbita moschata]5.8e-0456.52Show/hide
Query:  TLKSKSFLF-FSLSLSLSLSHIS-----LSLSTYAFKDSRTTHKLRFKVYWSHILFKFGIGDNCINRDC
        TL    F F F L+L+ S S I      LSLST AFKDSR+ H+   +VYW  ILFKF IGDNCINR C
Subjt:  TLKSKSFLF-FSLSLSLSLSHIS-----LSLSTYAFKDSRTTHKLRFKVYWSHILFKFGIGDNCINRDC

TrEMBL top hitse value%identityAlignment
A0A6J1FPN2 helicase sen1-like2.8e-0456.52Show/hide
Query:  TLKSKSFLF-FSLSLSLSLSHIS-----LSLSTYAFKDSRTTHKLRFKVYWSHILFKFGIGDNCINRDC
        TL    F F F L+L+ S S I      LSLST AFKDSR+ H+   +VYW  ILFKF IGDNCINR C
Subjt:  TLKSKSFLF-FSLSLSLSLSHIS-----LSLSTYAFKDSRTTHKLRFKVYWSHILFKFGIGDNCINRDC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACCTTGCCTTCCCTCATATTTGCATTCTCTTTCTTCCTCGCTCTTGCTTGCTCTGACTCTTAAATCAAAGAGCTTCCTTTTCTTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCATATCTCTCTCTCTCTCTCCACTTATGCATTCAAGGATTCAAGGACTACCCATAAGTTGAGGTTCAAGGTTTATTGGTCTCACATCCTTTTC
AAGTTCGGCATTGGAGATAACTGTATCAATAGGGACTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACACCTTGCCTTCCCTCATATTTGCATTCTCTTTCTTCCTCGCTCTTGCTTGCTCTGACTCTTAAATCAAAGAGCTTCCTTTTCTTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCATATCTCTCTCTCTCTCTCCACTTATGCATTCAAGGATTCAAGGACTACCCATAAGTTGAGGTTCAAGGTTTATTGGTCTCACATCCTTTTC
AAGTTCGGCATTGGAGATAACTGTATCAATAGGGACTGTTAA
Protein sequenceShow/hide protein sequence
MTPCLPSYLHSLSSSLLLALTLKSKSFLFFSLSLSLSLSHISLSLSTYAFKDSRTTHKLRFKVYWSHILFKFGIGDNCINRDC