; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0011543 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0011543
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRNA helicase family protein
Genome locationchr04:14436097..14437554
RNA-Seq ExpressionPay0011543
SyntenyPay0011543
Gene Ontology termsGO:0005681 - spliceosomal complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039745.1 putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo var. makuwa]2.2e-1372Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN-FH--KSFSILIGL
        MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM+ +H  K   IL+GL
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN-FH--KSFSILIGL

KAA0057022.1 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1 [Cucumis melo var. makuwa]1.1e-1278.69Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN
        MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM+
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN

XP_004148780.1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 [Cucumis sativus]1.1e-1278.69Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN
        MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM+
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN

XP_008442984.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X3 [Cucumis melo]1.1e-1278.69Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN
        MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM+
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN

XP_016902463.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 [Cucumis melo]4.0e-4782.71Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMNFHKSFSILIGLFFIDILQEMGLLEIKHGLLQLAESLNFL
        MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM+FHKSFSI + LFFIDILQEMGLLEIK+GLLQLAESLNFL
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMNFHKSFSILIGLFFIDILQEMGLLEIKHGLLQLAESLNFL

Query:  HSNARLIHRAISSEVLPKSIGAVKPYLQQFIDV
        HSNARLIH  ISS+VLP+SIGAVK YLQQFI+V
Subjt:  HSNARLIHRAISSEVLPKSIGAVKPYLQQFIDV

TrEMBL top hitse value%identityAlignment
A0A0A0LV75 Uncharacterized protein5.3e-1378.69Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN
        MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM+
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN

A0A1S3B7Q6 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X25.3e-1378.69Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN
        MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM+
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN

A0A1S4E2L5 putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.091.9e-4782.71Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMNFHKSFSILIGLFFIDILQEMGLLEIKHGLLQLAESLNFL
        MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM+FHKSFSI + LFFIDILQEMGLLEIK+GLLQLAESLNFL
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMNFHKSFSILIGLFFIDILQEMGLLEIKHGLLQLAESLNFL

Query:  HSNARLIHRAISSEVLPKSIGAVKPYLQQFIDV
        HSNARLIH  ISS+VLP+SIGAVK YLQQFI+V
Subjt:  HSNARLIHRAISSEVLPKSIGAVKPYLQQFIDV

A0A5A7TE68 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.091.1e-1372Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN-FH--KSFSILIGL
        MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM+ +H  K   IL+GL
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN-FH--KSFSILIGL

A0A5A7UME2 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X15.3e-1378.69Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN
        MVDEAHERSISTDMLLGLLKK           IQRRR DLRLIISSATIEAKSMSTFFQM+
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN

SwissProt top hitse value%identityAlignment
F4JRJ6 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH92.5e-1270.69Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFF
        M+DEAHERSISTD+LLGLLKK           IQRRR +LRLIISSATIEAK+MS FF
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFF

Q38953 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH54.2e-0750Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFF
        M+DEAHER+I TD+L GLLKK           + +RR DLRLI++SAT++A+  S +F
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFF

Q5RBD4 Probable ATP-dependent RNA helicase DHX351.9e-0747.54Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN
        M+DEAHER++ TD+ +GLLKK           IQ++R DLRLI++SAT++A     FF  N
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN

Q9BKQ8 Probable ATP-dependent RNA helicase DHX35 homolog2.9e-0852.46Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN
        M+DEAHERS +TD+LLGLL+K        + QI   R+DLR+I+SSAT++A+    FF+MN
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN

Q9H5Z1 Probable ATP-dependent RNA helicase DHX351.9e-0747.54Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN
        M+DEAHER++ TD+ +GLLKK           IQ++R DLRLI++SAT++A     FF  N
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMN

Arabidopsis top hitse value%identityAlignment
AT1G22870.1 Protein kinase family protein with ARM repeat domain2.1e-0977.14Show/hide
Query:  EMGLLEIKHGLLQLAESLNFLHSNARLIHRAISSE
        EM LLE+KHGLLQ+AE+LNFLH+NA LIHRA+S E
Subjt:  EMGLLEIKHGLLQLAESLNFLHSNARLIHRAISSE

AT1G71410.1 ARM repeat superfamily protein9.3e-1069.57Show/hide
Query:  EMGLLEIKHGLLQLAESLNFLHSNARLIHRAISSE-VLPKSIGAVK
        EM LLE+KHGLLQ++E+LNFLH+NA LIHRAIS E VL  S G+ K
Subjt:  EMGLLEIKHGLLQLAESLNFLHSNARLIHRAISSE-VLPKSIGAVK

AT3G26560.1 ATP-dependent RNA helicase, putative3.0e-0850Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFF
        M+DEAHER+I TD+L GLLKK           + +RR DLRLI++SAT++A+  S +F
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFF

AT4G18465.1 RNA helicase family protein1.8e-1370.69Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFF
        M+DEAHERSISTD+LLGLLKK           IQRRR +LRLIISSATIEAK+MS FF
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFF

AT5G10370.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related6.7e-0850Show/hide
Query:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFF
        ++DEAHERS++TD+LL LLKK           +  RR DLRL+I SAT +AK +S +F
Subjt:  MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATGAAGCACATGAAAGGTCTATCTCAACTGACATGTTACTTGGTCTCTTGAAAAAAGCATTCTGTAATTGTATTGATTATGTATTCCAGATTCAACGGCGACG
ATCCGATCTGCGATTGATTATCTCTTCTGCTACAATTGAGGCTAAATCAATGTCAACTTTCTTCCAAATGAATTTTCATAAAAGCTTCTCTATTCTCATCGGCTTGTTCT
TCATTGACATTTTACAGGAAATGGGTTTACTGGAAATAAAACATGGTTTGCTTCAACTAGCAGAGTCTTTAAACTTTCTTCATAGCAATGCACGTCTCATTCATCGTGCT
ATATCTTCGGAGGTTTTGCCAAAATCCATTGGAGCAGTGAAGCCATATTTACAACAATTCATTGATGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGATGAAGCACATGAAAGGTCTATCTCAACTGACATGTTACTTGGTCTCTTGAAAAAAGCATTCTGTAATTGTATTGATTATGTATTCCAGATTCAACGGCGACG
ATCCGATCTGCGATTGATTATCTCTTCTGCTACAATTGAGGCTAAATCAATGTCAACTTTCTTCCAAATGAATTTTCATAAAAGCTTCTCTATTCTCATCGGCTTGTTCT
TCATTGACATTTTACAGGAAATGGGTTTACTGGAAATAAAACATGGTTTGCTTCAACTAGCAGAGTCTTTAAACTTTCTTCATAGCAATGCACGTCTCATTCATCGTGCT
ATATCTTCGGAGGTTTTGCCAAAATCCATTGGAGCAGTGAAGCCATATTTACAACAATTCATTGATGTATAG
Protein sequenceShow/hide protein sequence
MVDEAHERSISTDMLLGLLKKAFCNCIDYVFQIQRRRSDLRLIISSATIEAKSMSTFFQMNFHKSFSILIGLFFIDILQEMGLLEIKHGLLQLAESLNFLHSNARLIHRA
ISSEVLPKSIGAVKPYLQQFIDV