; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0011625 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0011625
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr04:7918297..7919186
RNA-Seq ExpressionPay0011625
SyntenyPay0011625
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047613.1 uncharacterized protein E6C27_scaffold115G00860 [Cucumis melo var. makuwa]4.8e-9468.73Show/hide
Query:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP
        MNLIEKA LS TISDV PFYPQLIREFIVNLP N NDPSS DY TVHI+GFKFTISPT+INGFLGNVVSINFSPSSSSTD+LAS LS   LSSWPVNGIP
Subjt:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP

Query:  AVVL----------------------SCFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLT
        AV L                      S F +LGTFLY IYNDDRVDAGAFI NQLLRHVGSFGVKLPIALPRFF  LLLHLNA VLTT DA G DPKTL 
Subjt:  AVVL----------------------SCFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLT

Query:  LSYRLFQGT--------------------------TDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRG
        LSYRLFQ +                          TDGF VD+ELA RI+N LT ES SL T I LM +RRLEIDSLI HLKTFAPSSS+G
Subjt:  LSYRLFQGT--------------------------TDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRG

KAA0067563.1 uncharacterized protein E6C27_scaffold485G00260 [Cucumis melo var. makuwa]1.6e-9768.92Show/hide
Query:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP
        MNLIEK  LSKTI DV  FYPQLIREFIVNLP + NDPSS DY  VHIRGFKFTIS TMINGFLGN VSINFSPSS ST+VLAS L   TLSSWPVNGIP
Subjt:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP

Query:  AVVL----------------------SCFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLT
        AV L                      S   +LGTFLY IYNDDRVD G FIYNQLLRHVGSFGVKLPIALPRFFS LLLHLNAAVLTT DAP PDPKTL+
Subjt:  AVVL----------------------SCFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLT

Query:  LSYRLFQG--------------------------TTDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRGDPSVE
        LSYRLFQG                           TDGFFVDKELA+RI+NSL  ES SL TAI LMS+RRLEIDSLI HLKTFAPSSSRGDP+ +
Subjt:  LSYRLFQG--------------------------TTDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRGDPSVE

XP_008456217.1 PREDICTED: uncharacterized protein LOC103496220 [Cucumis melo]9.6e-10374.46Show/hide
Query:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP
        MNLIEKA LSKTISDV PFYPQLIREF+VNLPT+ NDPSSP+Y T+HIRGFK TISPT+INGFLGNVVSINF+PSSSSTDVLA ELS  TLSSWPVNGI 
Subjt:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP

Query:  AVVLS----CFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLTLSYRLFQGT---------
        A  LS        +GTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRF S LLLHLNAA+LTT DAP PDPKTL+LSYRLFQG+         
Subjt:  AVVLS----CFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLTLSYRLFQGT---------

Query:  -----------------TDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRGDPSVE
                         TDGFFVDKELA RI+NSLTAES SL TAI L+S+ RLEID LI HLKTFAPSSSRGDPS +
Subjt:  -----------------TDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRGDPSVE

XP_008460128.1 PREDICTED: uncharacterized protein LOC103499027 [Cucumis melo]4.8e-9468.73Show/hide
Query:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP
        MNLIEKA LS TISDV PFYPQLIREFIVNLP N NDPSS DY TVHI+GFKFTISPT+INGFLGNVVSINFSPSSSSTD+LAS LS   LSSWPVNGIP
Subjt:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP

Query:  AVVL----------------------SCFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLT
        AV L                      S F +LGTFLY IYNDDRVDAGAFI NQLLRHVGSFGVKLPIALPRFF  LLLHLNA VLTT DA G DPKTL 
Subjt:  AVVL----------------------SCFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLT

Query:  LSYRLFQGT--------------------------TDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRG
        LSYRLFQ +                          TDGF VD+ELA RI+N LT ES SL T I LM +RRLEIDSLI HLKTFAPSSS+G
Subjt:  LSYRLFQGT--------------------------TDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRG

XP_008460260.1 PREDICTED: uncharacterized protein LOC103499138 [Cucumis melo]2.7e-9772.46Show/hide
Query:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP
        MNLI KA LSKTISDV  FYPQLIREF+VNLP + NDPSSPDY  VHIRGFKF+I+P +INGFLGNVVSINF  SS S DVLA ELSR TLSSWP NGIP
Subjt:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP

Query:  AVVLSCFCS--LGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLTLSYRLFQG------------
        A  LS   S  LGTFLY I NDDRVDA AFIYNQLLRHVGSFGVKLPIALPRFFS LLLHLNA +LTT DAP PDPKTL+LSYRLFQG            
Subjt:  AVVLSCFCS--LGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLTLSYRLFQG------------

Query:  --------------TTDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRGDPSVE
                       TDGFFVDKELA RI+NSLTAES SL TAI LMS+RRLE+DSLI HLKTFA SSSRG+PS +
Subjt:  --------------TTDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRGDPSVE

TrEMBL top hitse value%identityAlignment
A0A1S3C400 uncharacterized protein LOC1034962204.6e-10374.46Show/hide
Query:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP
        MNLIEKA LSKTISDV PFYPQLIREF+VNLPT+ NDPSSP+Y T+HIRGFK TISPT+INGFLGNVVSINF+PSSSSTDVLA ELS  TLSSWPVNGI 
Subjt:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP

Query:  AVVLS----CFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLTLSYRLFQGT---------
        A  LS        +GTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRF S LLLHLNAA+LTT DAP PDPKTL+LSYRLFQG+         
Subjt:  AVVLS----CFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLTLSYRLFQGT---------

Query:  -----------------TDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRGDPSVE
                         TDGFFVDKELA RI+NSLTAES SL TAI L+S+ RLEID LI HLKTFAPSSSRGDPS +
Subjt:  -----------------TDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRGDPSVE

A0A1S3CC38 uncharacterized protein LOC1034991381.3e-9772.46Show/hide
Query:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP
        MNLI KA LSKTISDV  FYPQLIREF+VNLP + NDPSSPDY  VHIRGFKF+I+P +INGFLGNVVSINF  SS S DVLA ELSR TLSSWP NGIP
Subjt:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP

Query:  AVVLSCFCS--LGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLTLSYRLFQG------------
        A  LS   S  LGTFLY I NDDRVDA AFIYNQLLRHVGSFGVKLPIALPRFFS LLLHLNA +LTT DAP PDPKTL+LSYRLFQG            
Subjt:  AVVLSCFCS--LGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLTLSYRLFQG------------

Query:  --------------TTDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRGDPSVE
                       TDGFFVDKELA RI+NSLTAES SL TAI LMS+RRLE+DSLI HLKTFA SSSRG+PS +
Subjt:  --------------TTDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRGDPSVE

A0A1S3CCA3 uncharacterized protein LOC1034990272.3e-9468.73Show/hide
Query:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP
        MNLIEKA LS TISDV PFYPQLIREFIVNLP N NDPSS DY TVHI+GFKFTISPT+INGFLGNVVSINFSPSSSSTD+LAS LS   LSSWPVNGIP
Subjt:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP

Query:  AVVL----------------------SCFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLT
        AV L                      S F +LGTFLY IYNDDRVDAGAFI NQLLRHVGSFGVKLPIALPRFF  LLLHLNA VLTT DA G DPKTL 
Subjt:  AVVL----------------------SCFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLT

Query:  LSYRLFQGT--------------------------TDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRG
        LSYRLFQ +                          TDGF VD+ELA RI+N LT ES SL T I LM +RRLEIDSLI HLKTFAPSSS+G
Subjt:  LSYRLFQGT--------------------------TDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRG

A0A5A7TVN6 Uncharacterized protein2.3e-9468.73Show/hide
Query:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP
        MNLIEKA LS TISDV PFYPQLIREFIVNLP N NDPSS DY TVHI+GFKFTISPT+INGFLGNVVSINFSPSSSSTD+LAS LS   LSSWPVNGIP
Subjt:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP

Query:  AVVL----------------------SCFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLT
        AV L                      S F +LGTFLY IYNDDRVDAGAFI NQLLRHVGSFGVKLPIALPRFF  LLLHLNA VLTT DA G DPKTL 
Subjt:  AVVL----------------------SCFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLT

Query:  LSYRLFQGT--------------------------TDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRG
        LSYRLFQ +                          TDGF VD+ELA RI+N LT ES SL T I LM +RRLEIDSLI HLKTFAPSSS+G
Subjt:  LSYRLFQGT--------------------------TDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRG

A0A5A7VHK0 Uncharacterized protein7.7e-9868.92Show/hide
Query:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP
        MNLIEK  LSKTI DV  FYPQLIREFIVNLP + NDPSS DY  VHIRGFKFTIS TMINGFLGN VSINFSPSS ST+VLAS L   TLSSWPVNGIP
Subjt:  MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIP

Query:  AVVL----------------------SCFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLT
        AV L                      S   +LGTFLY IYNDDRVD G FIYNQLLRHVGSFGVKLPIALPRFFS LLLHLNAAVLTT DAP PDPKTL+
Subjt:  AVVL----------------------SCFCSLGTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLT

Query:  LSYRLFQG--------------------------TTDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRGDPSVE
        LSYRLFQG                           TDGFFVDKELA+RI+NSL  ES SL TAI LMS+RRLEIDSLI HLKTFAPSSSRGDP+ +
Subjt:  LSYRLFQG--------------------------TTDGFFVDKELAFRIINSLTAESSSLFTAIGLMSKRRLEIDSLICHLKTFAPSSSRGDPSVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCTGATTGAGAAGGCTAGATTGTCTAAAACTATTTCGGACGTGTACCCGTTTTATCCTCAACTTATTAGAGAATTTATAGTTAATTTGCCAACTAATGTCAATGA
CCCAAGTAGCCCGGATTATCTGACGGTTCATATTAGGGGCTTTAAATTTACAATTTCTCCTACTATGATAAATGGTTTTCTGGGAAATGTTGTTTCCATTAACTTTTCTC
CATCATCCTCGTCAACTGATGTTTTGGCCTCTGAATTGTCTAGAGTGACATTATCCTCGTGGCCTGTGAATGGTATACCTGCTGTTGTGCTAAGTTGTTTCTGCTCGTTG
GGCACATTCTTGTATCGCATCTACAATGATGACAGGGTAGACGCTGGTGCATTTATCTATAATCAACTGTTAAGGCATGTTGGATCATTTGGGGTTAAGCTTCCGATTGC
TCTACCAAGGTTCTTTTCTGACTTACTACTACACTTAAATGCTGCTGTATTAACCACCTTGGATGCACCTGGCCCTGATCCTAAGACATTAACACTGAGCTACAGACTCT
TTCAGGGCACTACTGATGGGTTCTTTGTTGATAAGGAGTTGGCTTTCAGAATTATTAATTCTCTTACAGCCGAGTCTAGTTCGTTATTTACTGCCATTGGTCTGATGTCT
AAACGGCGTTTGGAAATCGATTCTCTTATTTGTCATCTGAAGACTTTTGCTCCATCCTCAAGTCGAGGGGATCCTAGTGTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCTGATTGAGAAGGCTAGATTGTCTAAAACTATTTCGGACGTGTACCCGTTTTATCCTCAACTTATTAGAGAATTTATAGTTAATTTGCCAACTAATGTCAATGA
CCCAAGTAGCCCGGATTATCTGACGGTTCATATTAGGGGCTTTAAATTTACAATTTCTCCTACTATGATAAATGGTTTTCTGGGAAATGTTGTTTCCATTAACTTTTCTC
CATCATCCTCGTCAACTGATGTTTTGGCCTCTGAATTGTCTAGAGTGACATTATCCTCGTGGCCTGTGAATGGTATACCTGCTGTTGTGCTAAGTTGTTTCTGCTCGTTG
GGCACATTCTTGTATCGCATCTACAATGATGACAGGGTAGACGCTGGTGCATTTATCTATAATCAACTGTTAAGGCATGTTGGATCATTTGGGGTTAAGCTTCCGATTGC
TCTACCAAGGTTCTTTTCTGACTTACTACTACACTTAAATGCTGCTGTATTAACCACCTTGGATGCACCTGGCCCTGATCCTAAGACATTAACACTGAGCTACAGACTCT
TTCAGGGCACTACTGATGGGTTCTTTGTTGATAAGGAGTTGGCTTTCAGAATTATTAATTCTCTTACAGCCGAGTCTAGTTCGTTATTTACTGCCATTGGTCTGATGTCT
AAACGGCGTTTGGAAATCGATTCTCTTATTTGTCATCTGAAGACTTTTGCTCCATCCTCAAGTCGAGGGGATCCTAGTGTTGAATGA
Protein sequenceShow/hide protein sequence
MNLIEKARLSKTISDVYPFYPQLIREFIVNLPTNVNDPSSPDYLTVHIRGFKFTISPTMINGFLGNVVSINFSPSSSSTDVLASELSRVTLSSWPVNGIPAVVLSCFCSL
GTFLYRIYNDDRVDAGAFIYNQLLRHVGSFGVKLPIALPRFFSDLLLHLNAAVLTTLDAPGPDPKTLTLSYRLFQGTTDGFFVDKELAFRIINSLTAESSSLFTAIGLMS
KRRLEIDSLICHLKTFAPSSSRGDPSVE