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Pay0011645 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0011645
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotransposon protein
Genome locationchr01:11910363..11911425
RNA-Seq ExpressionPay0011645
SyntenyPay0011645
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048191.1 retrotransposon protein [Cucumis melo var. makuwa]2.9e-7255.48Show/hide
Query:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHS----------------------CAL
        MLRTR GLEATQYVDVEEM AIFLHIVAHDVKNRVARRH ARS  TVSRHFN VLNAVLR+HEILLKQPD VTHS                      CAL
Subjt:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHS----------------------CAL

Query:  DGTHIKVNVSMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL--------------
        DGTHIKVNVSMSD PRYR RK DITTN          F+FVMP WE SASDSRVLRD VSRP GLKVPKGYYYLCDA Y NVEGFL              
Subjt:  DGTHIKVNVSMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL--------------

Query:  ---------------------------------------------------------------------ATFEEPHLGEGDSSEMNIENINFVETTNVWT
                                                                             ATFEEPHLGE DSSEMNIENINFVETTNVWT
Subjt:  ---------------------------------------------------------------------ATFEEPHLGEGDSSEMNIENINFVETTNVWT

Query:  E
        E
Subjt:  E

KAA0050107.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]5.6e-7177.78Show/hide
Query:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSC-------------ALDGTHIKVNV
        MLRT+ GLEATQYVDVEEMVAIFLHIVAHDVKNRVARRH ARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSC             AL GTHIKVNV
Subjt:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSC-------------ALDGTHIKVNV

Query:  SMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFLATF--EEPHLGE
        SMSD PRYR RKGDITTN          F+FVMP WE SASDSRVLRDAVSRPT LKVPKGYYYLCDAGYPN EGFLA +  +  HL E
Subjt:  SMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFLATF--EEPHLGE

KAA0065306.1 retrotransposon protein [Cucumis melo var. makuwa]7.0e-7457.53Show/hide
Query:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSC-------------ALDGTHIKVNV
        MLRT+ GLEATQYVDVEEM+AIFLHIVAHDVKNRV RRH ARSGETVSRHF    NAVLRLHEILLKQPDPVT+SC             ALDGTHIKVNV
Subjt:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSC-------------ALDGTHIKVNV

Query:  SMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL-----------------------
        SMSD PRYR RKGDITTN          F+FVMP WE SASDSRVLRDAVSR TGLKVPKGYYYLCDAGYPN EGFL                       
Subjt:  SMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL-----------------------

Query:  ------------------------------------------------------------ATFEEPHLGEGDSSEMNIENINFVETTNVWTE
                                                                    ATF+EPHLGEGDSSEMNIENINFVETTNVWTE
Subjt:  ------------------------------------------------------------ATFEEPHLGEGDSSEMNIENINFVETTNVWTE

TYK08067.1 retrotransposon protein [Cucumis melo var. makuwa]4.4e-7659.86Show/hide
Query:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSCALDGTHIKVNVSMSDCPRYRFRKG
        MLRTR GLEATQYVDVEEM AIFLHIVAHDVKNRVARRH ARS  TVSRHFN VLNAVLR+HEILLKQPD VTHSCALDGTHIKVNVSMSD PRYR RK 
Subjt:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSCALDGTHIKVNVSMSDCPRYRFRKG

Query:  DITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL------------------------------------
        DITTN          F+FVMP WE SASDSRVLRD VSRP GLKVPKGYYYLCDA Y NVEGFL                                    
Subjt:  DITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL------------------------------------

Query:  -----------------------------------------------ATFEEPHLGEGDSSEMNIENINFVETTNVWTE
                                                       ATFEEPHLGE DSSEMNIENINFVETTNVWTE
Subjt:  -----------------------------------------------ATFEEPHLGEGDSSEMNIENINFVETTNVWTE

XP_008462938.1 PREDICTED: uncharacterized protein LOC103501200 [Cucumis melo]5.0e-7277.49Show/hide
Query:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSCALDGTHIKVNVSMSDCPRYRFRKG
        MLRTR GLEATQYVDVEE VAIFL+IVA+DVKNRVARRH ARS E VSRHFN VLNAVLRLHEILLKQPDPVTHSCALDGT+IKVNVSM D PR      
Subjt:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSCALDGTHIKVNVSMSDCPRYRFRKG

Query:  DITTNFVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL-----ATFEEPHLGEGDSSEMNIENINFVETTNVWTE
                    WE SASDSRVLRDAVSRPTG+K PKGYY LCDA YPN EGFL     ATFEEPH GEGDSSEMNIENINF+ETTNV TE
Subjt:  DITTNFVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL-----ATFEEPHLGEGDSSEMNIENINFVETTNVWTE

TrEMBL top hitse value%identityAlignment
A0A1S3CI20 uncharacterized protein LOC1035012002.4e-7277.49Show/hide
Query:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSCALDGTHIKVNVSMSDCPRYRFRKG
        MLRTR GLEATQYVDVEE VAIFL+IVA+DVKNRVARRH ARS E VSRHFN VLNAVLRLHEILLKQPDPVTHSCALDGT+IKVNVSM D PR      
Subjt:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSCALDGTHIKVNVSMSDCPRYRFRKG

Query:  DITTNFVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL-----ATFEEPHLGEGDSSEMNIENINFVETTNVWTE
                    WE SASDSRVLRDAVSRPTG+K PKGYY LCDA YPN EGFL     ATFEEPH GEGDSSEMNIENINF+ETTNV TE
Subjt:  DITTNFVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL-----ATFEEPHLGEGDSSEMNIENINFVETTNVWTE

A0A5A7U3R2 Retrotransposon protein1.4e-7255.48Show/hide
Query:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHS----------------------CAL
        MLRTR GLEATQYVDVEEM AIFLHIVAHDVKNRVARRH ARS  TVSRHFN VLNAVLR+HEILLKQPD VTHS                      CAL
Subjt:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHS----------------------CAL

Query:  DGTHIKVNVSMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL--------------
        DGTHIKVNVSMSD PRYR RK DITTN          F+FVMP WE SASDSRVLRD VSRP GLKVPKGYYYLCDA Y NVEGFL              
Subjt:  DGTHIKVNVSMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL--------------

Query:  ---------------------------------------------------------------------ATFEEPHLGEGDSSEMNIENINFVETTNVWT
                                                                             ATFEEPHLGE DSSEMNIENINFVETTNVWT
Subjt:  ---------------------------------------------------------------------ATFEEPHLGEGDSSEMNIENINFVETTNVWT

Query:  E
        E
Subjt:  E

A0A5A7U6W3 Putative nuclease HARBI12.7e-7177.78Show/hide
Query:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSC-------------ALDGTHIKVNV
        MLRT+ GLEATQYVDVEEMVAIFLHIVAHDVKNRVARRH ARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSC             AL GTHIKVNV
Subjt:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSC-------------ALDGTHIKVNV

Query:  SMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFLATF--EEPHLGE
        SMSD PRYR RKGDITTN          F+FVMP WE SASDSRVLRDAVSRPT LKVPKGYYYLCDAGYPN EGFLA +  +  HL E
Subjt:  SMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFLATF--EEPHLGE

A0A5A7VG45 Retrotransposon protein3.4e-7457.53Show/hide
Query:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSC-------------ALDGTHIKVNV
        MLRT+ GLEATQYVDVEEM+AIFLHIVAHDVKNRV RRH ARSGETVSRHF    NAVLRLHEILLKQPDPVT+SC             ALDGTHIKVNV
Subjt:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSC-------------ALDGTHIKVNV

Query:  SMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL-----------------------
        SMSD PRYR RKGDITTN          F+FVMP WE SASDSRVLRDAVSR TGLKVPKGYYYLCDAGYPN EGFL                       
Subjt:  SMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL-----------------------

Query:  ------------------------------------------------------------ATFEEPHLGEGDSSEMNIENINFVETTNVWTE
                                                                    ATF+EPHLGEGDSSEMNIENINFVETTNVWTE
Subjt:  ------------------------------------------------------------ATFEEPHLGEGDSSEMNIENINFVETTNVWTE

A0A5D3C7X6 Retrotransposon protein2.1e-7659.86Show/hide
Query:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSCALDGTHIKVNVSMSDCPRYRFRKG
        MLRTR GLEATQYVDVEEM AIFLHIVAHDVKNRVARRH ARS  TVSRHFN VLNAVLR+HEILLKQPD VTHSCALDGTHIKVNVSMSD PRYR RK 
Subjt:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSCALDGTHIKVNVSMSDCPRYRFRKG

Query:  DITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL------------------------------------
        DITTN          F+FVMP WE SASDSRVLRD VSRP GLKVPKGYYYLCDA Y NVEGFL                                    
Subjt:  DITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFL------------------------------------

Query:  -----------------------------------------------ATFEEPHLGEGDSSEMNIENINFVETTNVWTE
                                                       ATFEEPHLGE DSSEMNIENINFVETTNVWTE
Subjt:  -----------------------------------------------ATFEEPHLGEGDSSEMNIENINFVETTNVWTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein4.5e-1028.72Show/hide
Query:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRL---------HEILLKQPDPVT-----------HSCALDG
        ML+T   L+ T  + +EE VA+FL I  H+   R       R+ ETV R F  VL A   L          + L + P+ +               A+DG
Subjt:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRL---------HEILLKQPDPVT-----------HSCALDG

Query:  THIKVNVSMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKG-YYYLCDAGYPNVEGFLATF
        TH+ V V       Y  R  + + N          F ++      S  D+ VL+ A    +   +P    YYL D+GYPN +G LA +
Subjt:  THIKVNVSMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKG-YYYLCDAGYPNVEGFLATF

AT5G28730.1 unknown protein5.8e-1027.92Show/hide
Query:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSCALDGTHIKVNVSMSDCPRYRFRKG
        +L  + GL+++  + ++E VAIFL I A +   R        + ET+ R F+ VL A+ RL  +   +P  V    A+       N    D   + F   
Subjt:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSCALDGTHIKVNVSMSDCPRYRFRKG

Query:  -------------DITTNFVFVMPEWEESASDSRVLRDAVSRPTGLKV-PKGYYYLCDAGYPNVEGFLATFEEPHLGEGDSSEMNIENINFVETTNV
                     D+   F +       S  D+RVL  A+S      V P   YYL D+GY N  G+LA +   H    D    N   +N  ET N+
Subjt:  -------------DITTNFVFVMPEWEESASDSRVLRDAVSRPTGLKV-PKGYYYLCDAGYPNVEGFLATFEEPHLGEGDSSEMNIENINFVETTNV

AT5G28950.1 unknown protein5.5e-0843.06Show/hide
Query:  ALDGTHIKVNVSMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTG-LKVPK
        A+D THI   VS    P +R RKGDI+ N          F++V+  WE SA DS+VL DA++R +  L VP+
Subjt:  ALDGTHIKVNVSMSDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTG-LKVPK

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.1e-0538.96Show/hide
Query:  THIKVNVSMSDCPRYRFRKGDITTNFVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFLATF
        T  K N+ MS      F  G  T  F++V+  WE SA DSRVL DA+ +          +YL D G+ N   FLA F
Subjt:  THIKVNVSMSDCPRYRFRKGDITTNFVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFLATF

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)4.9e-2536.52Show/hide
Query:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRL---------HEILLKQPDPVTHSC--ALDGTHIKVNVSM
        +L+TR  L  T  + +E  +AIFL I+ H+++ R  +     SGET+SRHFN VLNAV+ +         +   L+  DP    C   +D  HI V V +
Subjt:  MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRL---------HEILLKQPDPVTHSC--ALDGTHIKVNVSM

Query:  SDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFLATF
         +   +R   G +T N          F +V+  WE SASD +VL  A++R   L+VP+G YY+ D  YPN+ GF+A +
Subjt:  SDCPRYRFRKGDITTN----------FVFVMPEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFLATF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAGAACAAGAAAGGGATTAGAAGCCACTCAATATGTGGATGTTGAAGAGATGGTTGCGATTTTTTTGCATATTGTAGCACACGATGTTAAGAATAGGGTAGCTCG
ACGACATTGTGCAAGGTCTGGTGAAACAGTGTCAAGACACTTCAATGCTGTTCTTAACGCAGTTCTTAGACTCCATGAAATCCTTCTTAAGCAACCTGATCCAGTGACCC
ATTCATGTGCATTAGATGGTACACACATCAAAGTGAATGTAAGTATGAGTGATTGTCCAAGGTATAGGTTTAGAAAGGGTGACATTACCACAAATTTCGTATTTGTCATG
CCTGAATGGGAAGAGTCTGCATCTGATTCGAGAGTACTTAGAGATGCAGTGTCACGACCTACTGGTCTAAAAGTCCCAAAGGGTTACTACTACTTGTGTGATGCTGGTTA
TCCAAATGTTGAAGGATTCCTCGCAACATTTGAAGAGCCACATCTTGGTGAAGGTGATTCAAGCGAGATGAACATTGAGAATATAAACTTCGTGGAAACAACTAATGTCT
GGACTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAGAACAAGAAAGGGATTAGAAGCCACTCAATATGTGGATGTTGAAGAGATGGTTGCGATTTTTTTGCATATTGTAGCACACGATGTTAAGAATAGGGTAGCTCG
ACGACATTGTGCAAGGTCTGGTGAAACAGTGTCAAGACACTTCAATGCTGTTCTTAACGCAGTTCTTAGACTCCATGAAATCCTTCTTAAGCAACCTGATCCAGTGACCC
ATTCATGTGCATTAGATGGTACACACATCAAAGTGAATGTAAGTATGAGTGATTGTCCAAGGTATAGGTTTAGAAAGGGTGACATTACCACAAATTTCGTATTTGTCATG
CCTGAATGGGAAGAGTCTGCATCTGATTCGAGAGTACTTAGAGATGCAGTGTCACGACCTACTGGTCTAAAAGTCCCAAAGGGTTACTACTACTTGTGTGATGCTGGTTA
TCCAAATGTTGAAGGATTCCTCGCAACATTTGAAGAGCCACATCTTGGTGAAGGTGATTCAAGCGAGATGAACATTGAGAATATAAACTTCGTGGAAACAACTAATGTCT
GGACTGAATGA
Protein sequenceShow/hide protein sequence
MLRTRKGLEATQYVDVEEMVAIFLHIVAHDVKNRVARRHCARSGETVSRHFNAVLNAVLRLHEILLKQPDPVTHSCALDGTHIKVNVSMSDCPRYRFRKGDITTNFVFVM
PEWEESASDSRVLRDAVSRPTGLKVPKGYYYLCDAGYPNVEGFLATFEEPHLGEGDSSEMNIENINFVETTNVWTE