; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0011713 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0011713
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr08:31618919..31619842
RNA-Seq ExpressionPay0011713
SyntenyPay0011713
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN67780.1 hypothetical protein VITISV_006406 [Vitis vinifera]3.0e-7858.46Show/hide
Query:  MMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM--------------KKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCPKE
        MMGEL+FFLGLQIKQLK+  FI+Q KY KDLLKRF +   K+              +K   +D   YRGM+GSL+YLTASRPDIM+SVCLCARFQSCPKE
Subjt:  MMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM--------------KKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCPKE

Query:  SHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLCDF
        SHL AVKRIL+Y  GT+++GLWYP+   F L+G+SD +F+   ++RKSTSGTC FLG S VSW SKKQNSVALST EAEYIA   Y AQIL M+QTL DF
Subjt:  SHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLCDF

Query:  GLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF
         L F++                        HI+I HHF+R+H Q   ITLEFVS+ +QLADIFTKPL+EE F
Subjt:  GLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF

KAG8633904.1 hypothetical protein MANES_18G147001v8 [Manihot esculenta]5.5e-8060.14Show/hide
Query:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM--------------KKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP
        MSMMGEL FFLGLQIKQ KD +FI+Q KYTK+L+KRF + + K               +K   +D K YRGM+GSLLYLTASRPDIMFSVCLCARFQSCP
Subjt:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM--------------KKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP

Query:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC
        KESHL+AVKRIL+Y  GT+ +GLWYPR+  F+L  YSD DF+ S+LDRKSTSGTCQ LG S VSW SKKQNSVALST EAEY+A     +QIL ++Q L 
Subjt:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC

Query:  DFGLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESFFF
        DF +  D+                        HIDI HHFIR+HV N  + LEFV +NNQLADIFTKPLNEE F F
Subjt:  DFGLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESFFF

KYP56106.1 Copia protein [Cajanus cajan]3.0e-7858.55Show/hide
Query:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM----KKSIC----------VDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP
        MSMMGEL+FFLGLQI+Q K+ +FI+Q KY K+LLKRF + + K       + C          +D+K YRGM+GSLLYL+ASRPDIMFSVCLCAR+QS P
Subjt:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM----KKSIC----------VDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP

Query:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC
        KESHL AVKRI++Y LGT ++GLWYP+N+ FNLVGYSD DF+    DRKSTSGTC F+GS+ VSW SKKQNSVALST EAEYIA  S  AQIL M+Q L 
Subjt:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC

Query:  DFGLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESFF
        D+GL  D+                        HI+I HHF+R+HVQ     LEFV + NQLADIFTKPL +E+FF
Subjt:  DFGLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESFF

RVW71911.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.4e-7858.76Show/hide
Query:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM--------------KKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP
        MSMMGEL++FLGLQIKQLK+  FI+Q KY KDLLKRF +   K+              +K   +D   YRGM+GSLLYLTASRPDIM+SVCLCARFQSCP
Subjt:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM--------------KKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP

Query:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC
        KESHL AVKRIL+Y  GT+++GLWYP+   F L+G+SD DF+   ++RKSTSGTC FLG S VSW SKKQNSVALST EAEYIA     AQIL M+QTL 
Subjt:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC

Query:  DFGLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF
        DF L F++                        HI+I HHF+R+H Q   ITLEFVS+ +QLADIFTKPL+EE F
Subjt:  DFGLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF

XP_020113283.1 uncharacterized protein LOC109727552, partial [Ananas comosus]9.4e-8060.58Show/hide
Query:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM--------------KKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP
        MSMMGELSFFLGLQ+KQ+KD +FI+Q KY KDL+KRF L S K               +K   VDIK YRGM+GSLLYLTASRPDIMFSVCLCA+FQ+ P
Subjt:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM--------------KKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP

Query:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC
        KESHL AVKRIL+Y  GT+++GLWYP    FNL+G+SD DF+   +DRKSTSGTCQFLG S VSW SKKQNSVALST EAEYIA     AQ+L M+QTL 
Subjt:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC

Query:  DFG-------LKFDN-----------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF
        DFG       +K DN                 HI+I HHFIR+H+Q   +T+EFV + NQLADIFTKPL+E+ F
Subjt:  DFG-------LKFDN-----------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF

TrEMBL top hitse value%identityAlignment
A0A151SMP1 Copia protein1.5e-7858.55Show/hide
Query:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM----KKSIC----------VDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP
        MSMMGEL+FFLGLQI+Q K+ +FI+Q KY K+LLKRF + + K       + C          +D+K YRGM+GSLLYL+ASRPDIMFSVCLCAR+QS P
Subjt:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM----KKSIC----------VDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP

Query:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC
        KESHL AVKRI++Y LGT ++GLWYP+N+ FNLVGYSD DF+    DRKSTSGTC F+GS+ VSW SKKQNSVALST EAEYIA  S  AQIL M+Q L 
Subjt:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC

Query:  DFGLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESFF
        D+GL  D+                        HI+I HHF+R+HVQ     LEFV + NQLADIFTKPL +E+FF
Subjt:  DFGLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESFF

A0A438GI90 Retrovirus-related Pol polyprotein from transposon TNT 1-946.6e-7958.76Show/hide
Query:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM--------------KKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP
        MSMMGEL++FLGLQIKQLK+  FI+Q KY KDLLKRF +   K+              +K   +D   YRGM+GSLLYLTASRPDIM+SVCLCARFQSCP
Subjt:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM--------------KKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP

Query:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC
        KESHL AVKRIL+Y  GT+++GLWYP+   F L+G+SD DF+   ++RKSTSGTC FLG S VSW SKKQNSVALST EAEYIA     AQIL M+QTL 
Subjt:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC

Query:  DFGLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF
        DF L F++                        HI+I HHF+R+H Q   ITLEFVS+ +QLADIFTKPL+EE F
Subjt:  DFGLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF

A0A6P5HB69 uncharacterized protein LOC1097275524.6e-8060.58Show/hide
Query:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM--------------KKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP
        MSMMGELSFFLGLQ+KQ+KD +FI+Q KY KDL+KRF L S K               +K   VDIK YRGM+GSLLYLTASRPDIMFSVCLCA+FQ+ P
Subjt:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM--------------KKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP

Query:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC
        KESHL AVKRIL+Y  GT+++GLWYP    FNL+G+SD DF+   +DRKSTSGTCQFLG S VSW SKKQNSVALST EAEYIA     AQ+L M+QTL 
Subjt:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC

Query:  DFG-------LKFDN-----------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF
        DFG       +K DN                 HI+I HHFIR+H+Q   +T+EFV + NQLADIFTKPL+E+ F
Subjt:  DFG-------LKFDN-----------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF

A5BD83 Reverse transcriptase Ty1/copia-type domain-containing protein1.5e-7858.46Show/hide
Query:  MMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM--------------KKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCPKE
        MMGEL+FFLGLQIKQLK+  FI+Q KY KDLLKRF +   K+              +K   +D   YRGM+GSL+YLTASRPDIM+SVCLCARFQSCPKE
Subjt:  MMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKM--------------KKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCPKE

Query:  SHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLCDF
        SHL AVKRIL+Y  GT+++GLWYP+   F L+G+SD +F+   ++RKSTSGTC FLG S VSW SKKQNSVALST EAEYIA   Y AQIL M+QTL DF
Subjt:  SHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLCDF

Query:  GLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF
         L F++                        HI+I HHF+R+H Q   ITLEFVS+ +QLADIFTKPL+EE F
Subjt:  GLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF

A5BLV7 Reverse transcriptase Ty1/copia-type domain-containing protein2.5e-7859.49Show/hide
Query:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMK-----MKKSICVDI---------KTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP
        MSMMGEL+FFLGLQIKQLK+  FI+Q KY +DLLKRF +   K     M  SI +D+           YRGM+GSLLYLT SRPDIM+SVCLCARFQSCP
Subjt:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMK-----MKKSICVDI---------KTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP

Query:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC
        K+SHL AVKRIL+Y  GT+D+GLWYP+   F L+GYSD DF    ++RKSTS TC FLG S VSW+SKKQNSVALST EAEYIAV    AQIL M+QTL 
Subjt:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLC

Query:  DFGLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF
        DF L F++                        HI+I HHF+R+H Q   ITLEFVS+ +QLADIFTKPL+EE F
Subjt:  DFGLKFDN------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.5e-3232.01Show/hide
Query:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKMKKSICVDIKTY-------------RGMVGSLLY-LTASRPDIMFSVCLCARFQSCP
        M+ + E+  F+G++I+  +D +++SQ  Y K +L +F + +     +       Y             R ++G L+Y +  +RPD+  +V + +R+ S  
Subjt:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKMKKSICVDIKTY-------------RGMVGSLLY-LTASRPDIMFSVCLCARFQSCP

Query:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKF--NLVGYSDMDFSDSLLDRKSTSG-TCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQ
               +KR+L+Y  GTID+ L + +N+ F   ++GY D D++ S +DRKST+G   +    + + W +K+QNSVA S+TEAEY+A+     + L ++ 
Subjt:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKF--NLVGYSDMDFSDSLLDRKSTSG-TCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQ

Query:  TLCDFGLKFDN-------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF
         L    +K +N                         HIDI +HF RE VQN+ I LE++ + NQLADIFTKPL    F
Subjt:  TLCDFGLKFDN-------------------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.2e-2230.39Show/hide
Query:  MSMMGELSFFLGLQI--KQLKDDMFISQEKYTKDLLKRFKLNS-----------MKMKKSIC---VDIK------TYRGMVGSLLY-LTASRPDIMFSVC
        M  +G     LG++I  ++    +++SQEKY + +L+RF + +           +K+ K +C   V+ K       Y   VGSL+Y +  +RPDI  +V 
Subjt:  MSMMGELSFFLGLQI--KQLKDDMFISQEKYTKDLLKRFKLNS-----------MKMKKSIC---VDIK------TYRGMVGSLLY-LTASRPDIMFSVC

Query:  LCARFQSCPKESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQ
        + +RF   P + H  AVK IL+Y  GT    L +  +    L GY+D D +  + +RKS++G         +SW SK Q  VALSTTEAEYIA      +
Subjt:  LCARFQSCPKESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQ

Query:  ILCMRQTLCDFGL------------------------KFDNHIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF
        ++ +++ L + GL                            HID+ +H+IRE V +  + +  +S+N   AD+ TK +    F
Subjt:  ILCMRQTLCDFGL------------------------KFDNHIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF

P92519 Uncharacterized mitochondrial protein AtMg008101.7e-2334.9Show/hide
Query:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKR--------------FKLNSMKMKKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP
        M  +G + +FLG+QIK     +F+SQ KY + +L                 KLNS  +  +   D   +R +VG+L YLT +RPDI ++V +  +    P
Subjt:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKR--------------FKLNSMKMKKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP

Query:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQI
          +    +KR+L+Y  GTI  GL+  +N K N+  + D D++     R+ST+G C FLG + +SW +K+Q +V+ S+TE EY A+A   A++
Subjt:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQI

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.1e-3335.46Show/hide
Query:  ELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMK---------MKKSI-----CVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCPKESHL
        EL +FLG++ K++   + +SQ +Y  DLL R  + + K          K S+       D   YRG+VGSL YL  +RPDI ++V   ++F   P E HL
Subjt:  ELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMK---------MKKSI-----CVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCPKESHL

Query:  YAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLCDFGLK
         A+KRIL+Y  GT + G++  +    +L  YSD D++    D  ST+G   +LG   +SW SKKQ  V  S+TEAEY +VA+  +++  +   L + G++
Subjt:  YAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLCDFGLK

Query:  F--------DN-----------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESFFFFV-KIGLNLV
                 DN                 HI I +HFIR  VQ+  + +  VS+++QLAD  TKPL+  +F  F  KIG+  V
Subjt:  F--------DN-----------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESFFFFV-KIGLNLV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.3e-3132.98Show/hide
Query:  ELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKMKKSICVDIKT-----------------YRGMVGSLLYLTASRPDIMFSVCLCARFQSCPKE
        +L +FLG++ K++   + +SQ +YT DLL R    +M   K +   + T                 YRG+VGSL YL  +RPD+ ++V   +++   P +
Subjt:  ELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKMKKSICVDIKT-----------------YRGMVGSLLYLTASRPDIMFSVCLCARFQSCPKE

Query:  SHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLCDF
         H  A+KR+L+Y  GT D G++  +    +L  YSD D++    D  ST+G   +LG   +SW SKKQ  V  S+TEAEY +VA+  +++  +   L + 
Subjt:  SHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLCDF

Query:  GLKF--------DN-----------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF-FFFVKIGL
        G++         DN                 HI + +HFIR  VQ+  + +  VS+++QLAD  TKPL+  +F  F  KIG+
Subjt:  GLKF--------DN-----------------HIDISHHFIREHVQNSHITLEFVSSNNQLADIFTKPLNEESF-FFFVKIGL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.7e-2637.11Show/hide
Query:  MGELSFFLGLQIKQLKDDMFISQEKYTKDLLKR-----FKLNSMKMKKSIC---------VDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCPKES
        +G L +FLGL+I +    + I Q KY  DLL        K +S+ M  S+          VD K YR ++G L+YL  +R DI F+V   ++F   P+ +
Subjt:  MGELSFFLGLQIKQLKDDMFISQEKYTKDLLKR-----FKLNSMKMKKSIC---------VDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCPKES

Query:  HLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQ
        H  AV +IL Y  GT+  GL+Y    +  L  +SD  F      R+ST+G C FLG+S +SW SKKQ  V+ S+ EAEY A++    +++ + Q
Subjt:  HLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQ

ATMG00810.1 DNA/RNA polymerases superfamily protein1.2e-2434.9Show/hide
Query:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKR--------------FKLNSMKMKKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP
        M  +G + +FLG+QIK     +F+SQ KY + +L                 KLNS  +  +   D   +R +VG+L YLT +RPDI ++V +  +    P
Subjt:  MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKR--------------FKLNSMKMKKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCP

Query:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQI
          +    +KR+L+Y  GTI  GL+  +N K N+  + D D++     R+ST+G C FLG + +SW +K+Q +V+ S+TE EY A+A   A++
Subjt:  KESHLYAVKRILKYFLGTIDVGLWYPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATGATGGGAGAACTTAGTTTCTTCCTTGGTCTTCAAATCAAACAACTCAAGGATGACATGTTCATAAGTCAAGAAAAATACACAAAGGATTTGCTTAAGAGATT
CAAATTAAATTCAATGAAGATGAAAAAAAGTATATGTGTGGATATAAAGACTTATCGAGGTATGGTTGGATCTTTACTTTATTTGACCGCTAGTAGACCCGATATCATGT
TTAGTGTATGTCTTTGTGCTAGATTTCAATCTTGTCCTAAAGAATCACATTTGTATGCTGTTAAAAGGATACTTAAATATTTTCTTGGGACTATTGATGTTGGATTATGG
TATCCTAGAAATGTTAAGTTTAATTTGGTAGGATATTCCGATATGGATTTTTCCGATAGTTTACTTGACCGCAAAAGTACTAGTGGGACTTGCCAATTTCTTGGTAGTTC
CTTTGTATCTTGGTTTAGTAAAAAGCAAAATTCAGTTGCTTTATCCACTACTGAAGCAGAATATATTGCGGTTGCTAGTTATCGTGCACAAATTCTTTGTATGAGACAAA
CTCTTTGTGATTTTGGATTAAAATTTGATAATCATATCGATATTAGTCATCACTTTATTAGAGAGCATGTGCAAAATAGTCATATTACTCTTGAGTTTGTGAGCTCTAAT
AATCAATTAGCAGATATATTTACCAAGCCTTTAAACGAAGAAAGTTTTTTTTTTTTTGTAAAAATAGGCTTGAACTTGGTATTATTCGTTGTGACACATCTTGATTTTAT
ATCTTACTTGATATTGTTACCGAATGCATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATGATGGGAGAACTTAGTTTCTTCCTTGGTCTTCAAATCAAACAACTCAAGGATGACATGTTCATAAGTCAAGAAAAATACACAAAGGATTTGCTTAAGAGATT
CAAATTAAATTCAATGAAGATGAAAAAAAGTATATGTGTGGATATAAAGACTTATCGAGGTATGGTTGGATCTTTACTTTATTTGACCGCTAGTAGACCCGATATCATGT
TTAGTGTATGTCTTTGTGCTAGATTTCAATCTTGTCCTAAAGAATCACATTTGTATGCTGTTAAAAGGATACTTAAATATTTTCTTGGGACTATTGATGTTGGATTATGG
TATCCTAGAAATGTTAAGTTTAATTTGGTAGGATATTCCGATATGGATTTTTCCGATAGTTTACTTGACCGCAAAAGTACTAGTGGGACTTGCCAATTTCTTGGTAGTTC
CTTTGTATCTTGGTTTAGTAAAAAGCAAAATTCAGTTGCTTTATCCACTACTGAAGCAGAATATATTGCGGTTGCTAGTTATCGTGCACAAATTCTTTGTATGAGACAAA
CTCTTTGTGATTTTGGATTAAAATTTGATAATCATATCGATATTAGTCATCACTTTATTAGAGAGCATGTGCAAAATAGTCATATTACTCTTGAGTTTGTGAGCTCTAAT
AATCAATTAGCAGATATATTTACCAAGCCTTTAAACGAAGAAAGTTTTTTTTTTTTTGTAAAAATAGGCTTGAACTTGGTATTATTCGTTGTGACACATCTTGATTTTAT
ATCTTACTTGATATTGTTACCGAATGCATATTGA
Protein sequenceShow/hide protein sequence
MSMMGELSFFLGLQIKQLKDDMFISQEKYTKDLLKRFKLNSMKMKKSICVDIKTYRGMVGSLLYLTASRPDIMFSVCLCARFQSCPKESHLYAVKRILKYFLGTIDVGLW
YPRNVKFNLVGYSDMDFSDSLLDRKSTSGTCQFLGSSFVSWFSKKQNSVALSTTEAEYIAVASYRAQILCMRQTLCDFGLKFDNHIDISHHFIREHVQNSHITLEFVSSN
NQLADIFTKPLNEESFFFFVKIGLNLVLFVVTHLDFISYLILLPNAY