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Pay0011760 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0011760
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPeriodic tryptophan protein 1-like protein
Genome locationchr02:21993805..21995750
RNA-Seq ExpressionPay0011760
SyntenyPay0011760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058057.1 periodic tryptophan protein 1-like protein [Cucumis melo var. makuwa]4.4e-18100Show/hide
Query:  VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA
        VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA
Subjt:  VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA

XP_022933466.1 uncharacterized WD repeat-containing protein C17D11.16 [Cucurbita moschata]1.9e-1339.29Show/hide
Query:  HSAATVVNCVIQPHVIQIDARNPSRSGYKWL-------------------VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA
        HS+  +++      V+  D RNPS SGYKWL                   VSLEDGTVKGF IRN TTETSSESKAS TLHA   + +C+ +        
Subjt:  HSAATVVNCVIQPHVIQIDARNPSRSGYKWL-------------------VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA

Query:  LNCGTCPIMNLRMW-------------HPPILKYYAFGFLLRRLSPF-AGYWSSKGKREVWDTLSDAA
        L  G+   M +++W             +P     ++  F      PF      SKGK EVWDTLSDAA
Subjt:  LNCGTCPIMNLRMW-------------HPPILKYYAFGFLLRRLSPF-AGYWSSKGKREVWDTLSDAA

XP_023007202.1 uncharacterized WD repeat-containing protein C17D11.16 [Cucurbita maxima]1.9e-1339.29Show/hide
Query:  HSAATVVNCVIQPHVIQIDARNPSRSGYKWL-------------------VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA
        HS+  +++      V+  D RNPS SGYKWL                   VSLEDGTVKGF IRN TTETSSESKAS TLHA   + +C+ +        
Subjt:  HSAATVVNCVIQPHVIQIDARNPSRSGYKWL-------------------VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA

Query:  LNCGTCPIMNLRMW-------------HPPILKYYAFGFLLRRLSPF-AGYWSSKGKREVWDTLSDAA
        L  G+   M +++W             +P     ++  F      PF      SKGK EVWDTLSDAA
Subjt:  LNCGTCPIMNLRMW-------------HPPILKYYAFGFLLRRLSPF-AGYWSSKGKREVWDTLSDAA

XP_023529554.1 uncharacterized WD repeat-containing protein C17D11.16 [Cucurbita pepo subsp. pepo]1.1e-1338.92Show/hide
Query:  HSAATVVNCVIQPHVIQIDARNPSRSGYKWL-------------------VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA
        HS+  +++      V+  D RNPS SGYKWL                   VSLEDGTVKGF IRN TTETSSESKAS TLHA   + +C+ +        
Subjt:  HSAATVVNCVIQPHVIQIDARNPSRSGYKWL-------------------VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA

Query:  LNCGTCPIMNLRMW-------------HPPILKYYAFGFLLRRLSPFAGYWSSKGKREVWDTLSDAA
        L  G+   M +++W             +P     ++  F       F     SKGK EVWDTLSDAA
Subjt:  LNCGTCPIMNLRMW-------------HPPILKYYAFGFLLRRLSPFAGYWSSKGKREVWDTLSDAA

XP_038890811.1 uncharacterized WD repeat-containing protein C17D11.16-like [Benincasa hispida]3.3e-1340.36Show/hide
Query:  HSAATVVNCVIQPHVIQIDARNPSRSGYKW-------------------LVSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA
        HS+  +++      V+  D RNPS SGYKW                   +VSLEDGTVKGF IRN TTETSSESKAS TLHA   + +C+ S        
Subjt:  HSAATVVNCVIQPHVIQIDARNPSRSGYKW-------------------LVSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA

Query:  LNCGTCPIMNLRMWH----------PPILKYYA-FGFLLRRLSPF-AGYWSSKGKREVWDTLSDAA
        L  G+   M +++W              LK  A F        PF      SKGK EVWDTL+DAA
Subjt:  LNCGTCPIMNLRMWH----------PPILKYYA-FGFLLRRLSPF-AGYWSSKGKREVWDTLSDAA

TrEMBL top hitse value%identityAlignment
A0A0A0LH54 WD_REPEATS_REGION domain-containing protein3.6e-1339.16Show/hide
Query:  HSAATVVNCVIQPHVIQIDARNPSRSGYKW-------------------LVSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA
        HS+  +++      V+  D RNPS SGYKW                   +VSLEDGTVKGF IRN TTE+SSESKAS TLHA   + +C+ S +      
Subjt:  HSAATVVNCVIQPHVIQIDARNPSRSGYKW-------------------LVSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA

Query:  LNCGTCPIMNLRMW-----HPPILKY------YAFGFLLRRLSPF-AGYWSSKGKREVWDTLSDAA
        L  G+   M +++W      P  L          F        PF      SKGK EVWDTL+DAA
Subjt:  LNCGTCPIMNLRMW-----HPPILKY------YAFGFLLRRLSPF-AGYWSSKGKREVWDTLSDAA

A0A1S3BUS3 periodic tryptophan protein 1 homolog1.4e-1238.1Show/hide
Query:  HSAATVVNCVIQPHVIQIDARNPSRSGYKW-------------------LVSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA
        HS+  +++      V   D RNPS SGYKW                   +VSLEDGTVKGF IRN TTETSSE+KAS TLHA   + +C+ S +      
Subjt:  HSAATVVNCVIQPHVIQIDARNPSRSGYKW-------------------LVSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA

Query:  LNCGTCPIMNLRMW-------------HPPILKYYAFGFLLRRLSPF-AGYWSSKGKREVWDTLSDAA
        L  G+   M +++W             +P     ++  F      PF      SKGK EVWDTL+DAA
Subjt:  LNCGTCPIMNLRMW-------------HPPILKYYAFGFLLRRLSPF-AGYWSSKGKREVWDTLSDAA

A0A5D3DXH3 Periodic tryptophan protein 1-like protein2.2e-18100Show/hide
Query:  VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA
        VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA
Subjt:  VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA

A0A6J1EZ45 uncharacterized WD repeat-containing protein C17D11.169.4e-1439.29Show/hide
Query:  HSAATVVNCVIQPHVIQIDARNPSRSGYKWL-------------------VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA
        HS+  +++      V+  D RNPS SGYKWL                   VSLEDGTVKGF IRN TTETSSESKAS TLHA   + +C+ +        
Subjt:  HSAATVVNCVIQPHVIQIDARNPSRSGYKWL-------------------VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA

Query:  LNCGTCPIMNLRMW-------------HPPILKYYAFGFLLRRLSPF-AGYWSSKGKREVWDTLSDAA
        L  G+   M +++W             +P     ++  F      PF      SKGK EVWDTLSDAA
Subjt:  LNCGTCPIMNLRMW-------------HPPILKYYAFGFLLRRLSPF-AGYWSSKGKREVWDTLSDAA

A0A6J1KY07 uncharacterized WD repeat-containing protein C17D11.169.4e-1439.29Show/hide
Query:  HSAATVVNCVIQPHVIQIDARNPSRSGYKWL-------------------VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA
        HS+  +++      V+  D RNPS SGYKWL                   VSLEDGTVKGF IRN TTETSSESKAS TLHA   + +C+ +        
Subjt:  HSAATVVNCVIQPHVIQIDARNPSRSGYKWL-------------------VSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQA

Query:  LNCGTCPIMNLRMW-------------HPPILKYYAFGFLLRRLSPF-AGYWSSKGKREVWDTLSDAA
        L  G+   M +++W             +P     ++  F      PF      SKGK EVWDTLSDAA
Subjt:  LNCGTCPIMNLRMW-------------HPPILKYYAFGFLLRRLSPF-AGYWSSKGKREVWDTLSDAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G18900.1 Transducin/WD40 repeat-like superfamily protein3.9e-0429.53Show/hide
Query:  VIQIDARNPSRSGYKW-------------------LVSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQALNCG----TCPIMN
        V+  D R PS SG+KW                   +VSLEDGTVKGF +R  +  ++SES  S T++        + S  I     L  G    T  + +
Subjt:  VIQIDARNPSRSGYKW-------------------LVSLEDGTVKGFHIRNPTTETSSESKASSTLHAMRIRKLCASSLTIPWHQALNCG----TCPIMN

Query:  LRMWHPPILKYY---AFGFLLRRLSP----FAGYWSSKGKREVWDTLSD
        L    P  +  +   A G      SP            G+ ++WDTLSD
Subjt:  LRMWHPPILKYY---AFGFLLRRLSP----FAGYWSSKGKREVWDTLSD

AT4G18905.1 Transducin/WD40 repeat-like superfamily protein5.4e-0629.61Show/hide
Query:  VIQIDARNPSRSGYKW-------------------LVSLEDGTVKGFHIRNPTTETSSESKASSTLHA-MRIRKLCASSLTIPWHQALNCGTCPIMNLRM
        V+  D R PS SG+KW                   +VSLEDGTVKGF IR   + + S+   + T+ A  + R + + S  I     L  G+    ++++
Subjt:  VIQIDARNPSRSGYKW-------------------LVSLEDGTVKGFHIRNPTTETSSESKASSTLHA-MRIRKLCASSLTIPWHQALNCGTCPIMNLRM

Query:  W-----HPPILKYY------AFGFLLRRLSPF-AGYWSSKGKREVWDTLSDA
        W      P  +  +       F       +PF      SKG+  VWDTL DA
Subjt:  W-----HPPILKYY------AFGFLLRRLSPF-AGYWSSKGKREVWDTLSDA

AT4G18905.2 Transducin/WD40 repeat-like superfamily protein5.4e-0629.61Show/hide
Query:  VIQIDARNPSRSGYKW-------------------LVSLEDGTVKGFHIRNPTTETSSESKASSTLHA-MRIRKLCASSLTIPWHQALNCGTCPIMNLRM
        V+  D R PS SG+KW                   +VSLEDGTVKGF IR   + + S+   + T+ A  + R + + S  I     L  G+    ++++
Subjt:  VIQIDARNPSRSGYKW-------------------LVSLEDGTVKGFHIRNPTTETSSESKASSTLHA-MRIRKLCASSLTIPWHQALNCGTCPIMNLRM

Query:  W-----HPPILKYY------AFGFLLRRLSPF-AGYWSSKGKREVWDTLSDA
        W      P  +  +       F       +PF      SKG+  VWDTL DA
Subjt:  W-----HPPILKYY------AFGFLLRRLSPF-AGYWSSKGKREVWDTLSDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGTTGTTCAATAACAATTGATTTAAAATTTATTCTTAAAACTTTGGGTTTAGAGGGGCTGAAAACTAATTTATCAATCGGTCAACTAATAGAATTGATAAAAAT
ATTGTTTTTGCCGTTGGCACCGGCCGCCACCGGCCCTCTCCTGTTCCCTCATTCAGCTGCCACTGTTGTGAACTGTGTCATTCAACCTCACGTAATTCAGATAGATGCAA
GAAACCCTTCCCGTTCAGGTTACAAGTGGCTAGTGAGCCTAGAGGATGGTACAGTGAAAGGTTTTCACATCCGGAATCCCACCACAGAGACTAGTTCTGAATCAAAAGCA
AGTTCTACTCTCCATGCCATGCGCATCAGAAAGCTGTGTGCTTCATCTCTTACAATCCCTTGGCACCAAGCGTTAAATTGTGGGACTTGTCCAATAATGAACCTTCGTAT
GTGGCATCCACCAATCTTAAAGTACTATGCTTTTGGTTTCCTTCTCCGAAGATTGTCCCCTTTTGCTGGCTATTGGAGCTCAAAAGGAAAACGGGAGGTGTGGGATACAT
TATCTGATGCTGCATCTCTCGAAAGTCGGGAAGCTGCAGGAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAGTTGTTCAATAACAATTGATTTAAAATTTATTCTTAAAACTTTGGGTTTAGAGGGGCTGAAAACTAATTTATCAATCGGTCAACTAATAGAATTGATAAAAAT
ATTGTTTTTGCCGTTGGCACCGGCCGCCACCGGCCCTCTCCTGTTCCCTCATTCAGCTGCCACTGTTGTGAACTGTGTCATTCAACCTCACGTAATTCAGATAGATGCAA
GAAACCCTTCCCGTTCAGGTTACAAGTGGCTAGTGAGCCTAGAGGATGGTACAGTGAAAGGTTTTCACATCCGGAATCCCACCACAGAGACTAGTTCTGAATCAAAAGCA
AGTTCTACTCTCCATGCCATGCGCATCAGAAAGCTGTGTGCTTCATCTCTTACAATCCCTTGGCACCAAGCGTTAAATTGTGGGACTTGTCCAATAATGAACCTTCGTAT
GTGGCATCCACCAATCTTAAAGTACTATGCTTTTGGTTTCCTTCTCCGAAGATTGTCCCCTTTTGCTGGCTATTGGAGCTCAAAAGGAAAACGGGAGGTGTGGGATACAT
TATCTGATGCTGCATCTCTCGAAAGTCGGGAAGCTGCAGGAAGTTGA
Protein sequenceShow/hide protein sequence
MDSCSITIDLKFILKTLGLEGLKTNLSIGQLIELIKILFLPLAPAATGPLLFPHSAATVVNCVIQPHVIQIDARNPSRSGYKWLVSLEDGTVKGFHIRNPTTETSSESKA
SSTLHAMRIRKLCASSLTIPWHQALNCGTCPIMNLRMWHPPILKYYAFGFLLRRLSPFAGYWSSKGKREVWDTLSDAASLESREAAGS