; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0012360 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0012360
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr03:19196621..19199265
RNA-Seq ExpressionPay0012360
SyntenyPay0012360
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033528.1 uncharacterized protein E6C27_scaffold261G00720 [Cucumis melo var. makuwa]1.3e-12149.38Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRA---------------------------------------------------
        MDVKSAFLNGYLNEEVYVAQPKGFVD EHPKHVYKLNKALYGLKQAPRA                                                   
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRA---------------------------------------------------

Query:  ------------------------------------------------------------------------------------CDFGMMYSYDTTPTLV
                                                                                             DFGMMYSYDTTPTLV
Subjt:  ------------------------------------------------------------------------------------CDFGMMYSYDTTPTLV

Query:  GYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAA-------------------------------------------------
        GYCDADWAG A+DRKST GGCFFLG+NLISWLSKK+  VSLS AEAEYI                                                   
Subjt:  GYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAA-------------------------------------------------

Query:  --------VGESAAPVSPAVHAHRASEATKPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPSGHSPFVHPPQSKLPTSEPDVVP---
                VGESAAPVSPAVHAHRASEATKPS PV +E+LPS+P GF+ SQESSS EG+FIPT G PRRSPAIPSGHSP VHPP+S LP S+PDVVP   
Subjt:  --------VGESAAPVSPAVHAHRASEATKPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPSGHSPFVHPPQSKLPTSEPDVVP---

Query:  --------------------------TEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKESLI
                                   +IP E IPP  DDPIAP SEGRP+SPKG KPPKRK+QQA+RNVT KT  KKIPAN+PSVPIDG SFHH+ES+ 
Subjt:  --------------------------TEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKESLI

Query:  R-EFIV--NLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVL
        R +F++   + D+FN+PSSADY+TV+I+GFKFVISPA+INGFLGNTVDIDC PSCPTTEVLA VL
Subjt:  R-EFIV--NLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVL

KAA0035021.1 uncharacterized protein E6C27_scaffold57G00710 [Cucumis melo var. makuwa]6.3e-15379.41Show/hide
Query:  VKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQN
        V SA  + Y    + VAQ    V+       +     L  ++      DFGMMYSYDTTPTLVGYCDADW GSADDRKSTS GCFFLGNNLISWLS+KQN
Subjt:  VKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQN

Query:  CVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEAT-------------------KPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPS
        CVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEAT                   KPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPS
Subjt:  CVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEAT-------------------KPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPS

Query:  GHSPFVHPPQSKLPTSEPDVVPTEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES------
        GHSPFVHPP+SKLPTSEPDVVPTEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES      
Subjt:  GHSPFVHPPQSKLPTSEPDVVPTEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES------

Query:  ---------LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVLS
                 LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVLS
Subjt:  ---------LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVLS

KAA0056181.1 uncharacterized protein E6C27_scaffold431G00070 [Cucumis melo var. makuwa]2.0e-11149.55Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQ---------APR----------AC------------------------DFGMMYS
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYK+NKALYGLK          A R          AC                        DFGMMYS
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQ---------APR----------AC------------------------DFGMMYS

Query:  YDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAA-----------------------------------------
        YD TPTL GYCDADWAGSADDRKSTSGGCFFLGNNLIS LSKKQN VSLS AEAEYIAA                                         
Subjt:  YDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAA-----------------------------------------

Query:  ------------------------------------------------------------------------------------VGESAAPVSPAVHAHR
                                                                                            V E AAPVSP VHAHR
Subjt:  ------------------------------------------------------------------------------------VGESAAPVSPAVHAHR

Query:  ASEATKPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPSGHSPFVHPPQSKLPTSEPDVVP---------------------------
        ASEATKPS PVT +RLPSDPP                              GHSP VHP +SKLPTS+PD VP                           
Subjt:  ASEATKPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPSGHSPFVHPPQSKLPTSEPDVVP---------------------------

Query:  --TEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES---------------LIREFIVNLPD
          TEIPPEDIPP TDDPIAPSSEGRPE PKGPKPPKRKTQQA++ VTTKT  KKI  NVPSVPIDGISFHH+ES               LIREFIVNLPD
Subjt:  --TEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES---------------LIREFIVNLPD

Query:  DFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVL
        +F DPSSA YQTV+I GFKFVISP VINGFLGNTVDID SPSCPTTEVLA VL
Subjt:  DFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVL

TYK30437.1 F5J5.1 [Cucumis melo var. makuwa]3.6e-10850.29Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRA---------------------------------------------------
        MDVKSAFLNGYLN EVYVAQPKGFVD EHPKHVYKLNKALYGLKQAPRA                                                   
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRA---------------------------------------------------

Query:  -----------------------------------------------------------------------------------------CDFGMMYSYDT
                                                                                                  DFGMMYSY+T
Subjt:  -----------------------------------------------------------------------------------------CDFGMMYSYDT

Query:  TPTLVGYCDADWAGSADDRK-------------STSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEATKPSGPVTAER
        TPTLVGY D DWAGS DDRK             +     ++L +  +   +  +   SL    +E +  VGESAAPVSP VHAHRA EAT    P  +  
Subjt:  TPTLVGYCDADWAGSADDRK-------------STSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEATKPSGPVTAER

Query:  LPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPSGHSPFVHPPQSKLPTSEPDVVP---------TEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPP
        +   PPG IHSQESSSTEG+FIPT GDPR SPAIPSGHSP VHP  SKLPT +PD VP         TEIPPEDI PPTDDPIAPSSEGR +SPKGPKPP
Subjt:  LPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPSGHSPFVHPPQSKLPTSEPDVVP---------TEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPP

Query:  KRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES---------------LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTV
        KRKTQQ +RNVTTK   KKIPANVPSVPIDGISFHHKES               LI+EFIVNLPD+FNDPSSADYQTV+ RGFKFVIS AVINGFLGNTV
Subjt:  KRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES---------------LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTV

Query:  DIDCSPSCPTTEVLANVLS
        DIDCSPSC T E+LA VLS
Subjt:  DIDCSPSCPTTEVLANVLS

XP_008463111.1 PREDICTED: uncharacterized protein LOC103501338 [Cucumis melo]1.3e-18289.63Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKK
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEH KHVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADW GSADDRKSTS GCFFLGNNLISWLS+K
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKK

Query:  QNCVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEAT-------------------KPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAI
        QNCVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEAT                   KPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAI
Subjt:  QNCVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEAT-------------------KPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAI

Query:  PSGHSPFVHPPQSKLPTSEPDVVPTEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES----
        PSGHSPFVHPP+SKLPTSEPDVVPTEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES    
Subjt:  PSGHSPFVHPPQSKLPTSEPDVVPTEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES----

Query:  -----------LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVLS
                   LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVLS
Subjt:  -----------LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVLS

TrEMBL top hitse value%identityAlignment
A0A1S3CK09 uncharacterized protein LOC1035013386.3e-18389.63Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKK
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEH KHVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADW GSADDRKSTS GCFFLGNNLISWLS+K
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKK

Query:  QNCVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEAT-------------------KPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAI
        QNCVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEAT                   KPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAI
Subjt:  QNCVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEAT-------------------KPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAI

Query:  PSGHSPFVHPPQSKLPTSEPDVVPTEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES----
        PSGHSPFVHPP+SKLPTSEPDVVPTEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES    
Subjt:  PSGHSPFVHPPQSKLPTSEPDVVPTEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES----

Query:  -----------LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVLS
                   LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVLS
Subjt:  -----------LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVLS

A0A5A7T093 Reverse transcriptase Ty1/copia-type domain-containing protein3.0e-15379.41Show/hide
Query:  VKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQN
        V SA  + Y    + VAQ    V+       +     L  ++      DFGMMYSYDTTPTLVGYCDADW GSADDRKSTS GCFFLGNNLISWLS+KQN
Subjt:  VKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQN

Query:  CVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEAT-------------------KPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPS
        CVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEAT                   KPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPS
Subjt:  CVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEAT-------------------KPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPS

Query:  GHSPFVHPPQSKLPTSEPDVVPTEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES------
        GHSPFVHPP+SKLPTSEPDVVPTEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES      
Subjt:  GHSPFVHPPQSKLPTSEPDVVPTEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES------

Query:  ---------LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVLS
                 LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVLS
Subjt:  ---------LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVLS

A0A5A7URM6 Reverse transcriptase Ty1/copia-type domain-containing protein9.9e-11249.55Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQ---------APR----------AC------------------------DFGMMYS
        MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYK+NKALYGLK          A R          AC                        DFGMMYS
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQ---------APR----------AC------------------------DFGMMYS

Query:  YDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAA-----------------------------------------
        YD TPTL GYCDADWAGSADDRKSTSGGCFFLGNNLIS LSKKQN VSLS AEAEYIAA                                         
Subjt:  YDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAA-----------------------------------------

Query:  ------------------------------------------------------------------------------------VGESAAPVSPAVHAHR
                                                                                            V E AAPVSP VHAHR
Subjt:  ------------------------------------------------------------------------------------VGESAAPVSPAVHAHR

Query:  ASEATKPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPSGHSPFVHPPQSKLPTSEPDVVP---------------------------
        ASEATKPS PVT +RLPSDPP                              GHSP VHP +SKLPTS+PD VP                           
Subjt:  ASEATKPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPSGHSPFVHPPQSKLPTSEPDVVP---------------------------

Query:  --TEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES---------------LIREFIVNLPD
          TEIPPEDIPP TDDPIAPSSEGRPE PKGPKPPKRKTQQA++ VTTKT  KKI  NVPSVPIDGISFHH+ES               LIREFIVNLPD
Subjt:  --TEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES---------------LIREFIVNLPD

Query:  DFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVL
        +F DPSSA YQTV+I GFKFVISP VINGFLGNTVDID SPSCPTTEVLA VL
Subjt:  DFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVL

A0A5D3B6P1 Reverse transcriptase Ty1/copia-type domain-containing protein6.2e-12249.38Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRA---------------------------------------------------
        MDVKSAFLNGYLNEEVYVAQPKGFVD EHPKHVYKLNKALYGLKQAPRA                                                   
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRA---------------------------------------------------

Query:  ------------------------------------------------------------------------------------CDFGMMYSYDTTPTLV
                                                                                             DFGMMYSYDTTPTLV
Subjt:  ------------------------------------------------------------------------------------CDFGMMYSYDTTPTLV

Query:  GYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAA-------------------------------------------------
        GYCDADWAG A+DRKST GGCFFLG+NLISWLSKK+  VSLS AEAEYI                                                   
Subjt:  GYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAA-------------------------------------------------

Query:  --------VGESAAPVSPAVHAHRASEATKPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPSGHSPFVHPPQSKLPTSEPDVVP---
                VGESAAPVSPAVHAHRASEATKPS PV +E+LPS+P GF+ SQESSS EG+FIPT G PRRSPAIPSGHSP VHPP+S LP S+PDVVP   
Subjt:  --------VGESAAPVSPAVHAHRASEATKPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPSGHSPFVHPPQSKLPTSEPDVVP---

Query:  --------------------------TEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKESLI
                                   +IP E IPP  DDPIAP SEGRP+SPKG KPPKRK+QQA+RNVT KT  KKIPAN+PSVPIDG SFHH+ES+ 
Subjt:  --------------------------TEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKESLI

Query:  R-EFIV--NLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVL
        R +F++   + D+FN+PSSADY+TV+I+GFKFVISPA+INGFLGNTVDIDC PSCPTTEVLA VL
Subjt:  R-EFIV--NLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPSCPTTEVLANVL

A0A5D3E2Y4 F5J5.11.7e-10850.29Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRA---------------------------------------------------
        MDVKSAFLNGYLN EVYVAQPKGFVD EHPKHVYKLNKALYGLKQAPRA                                                   
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRA---------------------------------------------------

Query:  -----------------------------------------------------------------------------------------CDFGMMYSYDT
                                                                                                  DFGMMYSY+T
Subjt:  -----------------------------------------------------------------------------------------CDFGMMYSYDT

Query:  TPTLVGYCDADWAGSADDRK-------------STSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEATKPSGPVTAER
        TPTLVGY D DWAGS DDRK             +     ++L +  +   +  +   SL    +E +  VGESAAPVSP VHAHRA EAT    P  +  
Subjt:  TPTLVGYCDADWAGSADDRK-------------STSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAAVGESAAPVSPAVHAHRASEATKPSGPVTAER

Query:  LPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPSGHSPFVHPPQSKLPTSEPDVVP---------TEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPP
        +   PPG IHSQESSSTEG+FIPT GDPR SPAIPSGHSP VHP  SKLPT +PD VP         TEIPPEDI PPTDDPIAPSSEGR +SPKGPKPP
Subjt:  LPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPSGHSPFVHPPQSKLPTSEPDVVP---------TEIPPEDIPPPTDDPIAPSSEGRPESPKGPKPP

Query:  KRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES---------------LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTV
        KRKTQQ +RNVTTK   KKIPANVPSVPIDGISFHHKES               LI+EFIVNLPD+FNDPSSADYQTV+ RGFKFVIS AVINGFLGNTV
Subjt:  KRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKES---------------LIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTV

Query:  DIDCSPSCPTTEVLANVLS
        DIDCSPSC T E+LA VLS
Subjt:  DIDCSPSCPTTEVLANVLS

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1615.5e-1141.3Show/hide
Query:  FVDSEHPKHVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIA
        F     P H   L + L  L+       +G+ ++   T  LVGY DADWAG  + R+STSG  F L    +SW SKKQ  V+LS+ E EY+A
Subjt:  FVDSEHPKHVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIA

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-0960Show/hide
Query:  PTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAA
        P L GY DAD AG  D+RKS++G  F      ISW SK Q CV+LST EAEYIAA
Subjt:  PTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAA

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-0860.42Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPR
        +DVK+AFL+G L EE+Y+ QP+GF  +     V KLNK+LYGLKQAPR
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPR

P92519 Uncharacterized mitochondrial protein AtMg008104.4e-0855.1Show/hide
Query:  YCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIA
        +CD+DWAG    R+ST+G C FLG N+ISW +K+Q  VS S+ E EY A
Subjt:  YCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIA

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.2e-1161.22Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRA
        +DV +AFL G L ++VY++QP GF+D + P +V KL KALYGLKQAPRA
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRA

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.4e-0837.76Show/hide
Query:  FVDSEHPKHVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAAVGESA
        F+     +H+  L + L  L   P   + G+      T +L  Y DADWAG  DD  ST+G   +LG++ ISW SKKQ  V  S+ EAEY +    S+
Subjt:  FVDSEHPKHVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAAVGESA

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE27.2e-1161.22Show/hide
Query:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRA
        +DV +AFL G L +EVY++QP GFVD + P +V +L KA+YGLKQAPRA
Subjt:  MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRA

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.4e-0841.11Show/hide
Query:  HVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAAVGESA
        H   L + L  L   P   D G+      T +L  Y DADWAG  DD  ST+G   +LG++ ISW SKKQ  V  S+ EAEY +    S+
Subjt:  HVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIAAVGESA

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.4e-0950.79Show/hide
Query:  GMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIA
        G+ YS      L  + DA +    D R+ST+G C FLG +LISW SKKQ  VS S+AEAEY A
Subjt:  GMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIA

ATMG00810.1 DNA/RNA polymerases superfamily protein3.1e-0955.1Show/hide
Query:  YCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIA
        +CD+DWAG    R+ST+G C FLG N+ISW +K+Q  VS S+ E EY A
Subjt:  YCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAEAEYIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTAAAGAGTGCCTTCTTAAATGGGTACTTGAATGAAGAGGTTTATGTTGCTCAACCAAAAGGTTTTGTAGATTCTGAGCACCCGAAGCATGTGTATAAGCTCAA
CAAAGCCTTATATGGACTAAAGCAAGCTCCGAGAGCTTGTGACTTTGGAATGATGTATTCCTATGATACCACTCCCACTCTAGTTGGATATTGTGATGCTGACTGGGCAG
GTTCAGCTGATGATCGTAAAAGTACGTCTGGAGGTTGCTTCTTTTTGGGAAACAATTTAATCTCTTGGTTAAGTAAGAAGCAAAACTGTGTTTCTTTATCTACAGCTGAA
GCTGAATATATAGCTGCAGTCGGGGAGTCTGCTGCTCCTGTCTCTCCTGCTGTGCATGCACATCGAGCTTCTGAGGCCACTAAACCCTCAGGGCCCGTTACAGCCGAGAG
GCTCCCTTCTGATCCCCCAGGTTTCATTCACTCTCAAGAGAGCTCATCAACCGAAGGGATATTCATTCCAACTCCAGGAGACCCTCGACGCTCACCAGCTATACCTTCAG
GTCATTCTCCCTTTGTTCACCCTCCTCAATCAAAACTACCTACTTCGGAACCGGATGTGGTGCCTACTGAGATACCTCCTGAAGACATTCCTCCTCCTACTGATGATCCC
ATTGCACCATCTTCTGAAGGAAGGCCAGAGTCTCCTAAAGGTCCTAAACCCCCAAAAAGAAAAACTCAACAGGCTAAAAGAAATGTTACCACAAAAACTAGCAGCAAGAA
AATTCCTGCAAATGTTCCATCTGTTCCCATTGATGGAATTTCTTTTCATCACAAGGAAAGCTTAATTAGAGAATTTATTGTCAATCTGCCTGATGACTTTAATGATCCGA
GTAGTGCTGACTATCAAACCGTGTACATTAGAGGGTTCAAATTTGTGATTTCACCTGCTGTGATAAATGGGTTTCTTGGAAATACTGTTGATATTGACTGCTCTCCATCA
TGTCCTACTACTGAGGTTTTAGCTAATGTCTTATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTAAAGAGTGCCTTCTTAAATGGGTACTTGAATGAAGAGGTTTATGTTGCTCAACCAAAAGGTTTTGTAGATTCTGAGCACCCGAAGCATGTGTATAAGCTCAA
CAAAGCCTTATATGGACTAAAGCAAGCTCCGAGAGCTTGTGACTTTGGAATGATGTATTCCTATGATACCACTCCCACTCTAGTTGGATATTGTGATGCTGACTGGGCAG
GTTCAGCTGATGATCGTAAAAGTACGTCTGGAGGTTGCTTCTTTTTGGGAAACAATTTAATCTCTTGGTTAAGTAAGAAGCAAAACTGTGTTTCTTTATCTACAGCTGAA
GCTGAATATATAGCTGCAGTCGGGGAGTCTGCTGCTCCTGTCTCTCCTGCTGTGCATGCACATCGAGCTTCTGAGGCCACTAAACCCTCAGGGCCCGTTACAGCCGAGAG
GCTCCCTTCTGATCCCCCAGGTTTCATTCACTCTCAAGAGAGCTCATCAACCGAAGGGATATTCATTCCAACTCCAGGAGACCCTCGACGCTCACCAGCTATACCTTCAG
GTCATTCTCCCTTTGTTCACCCTCCTCAATCAAAACTACCTACTTCGGAACCGGATGTGGTGCCTACTGAGATACCTCCTGAAGACATTCCTCCTCCTACTGATGATCCC
ATTGCACCATCTTCTGAAGGAAGGCCAGAGTCTCCTAAAGGTCCTAAACCCCCAAAAAGAAAAACTCAACAGGCTAAAAGAAATGTTACCACAAAAACTAGCAGCAAGAA
AATTCCTGCAAATGTTCCATCTGTTCCCATTGATGGAATTTCTTTTCATCACAAGGAAAGCTTAATTAGAGAATTTATTGTCAATCTGCCTGATGACTTTAATGATCCGA
GTAGTGCTGACTATCAAACCGTGTACATTAGAGGGTTCAAATTTGTGATTTCACCTGCTGTGATAAATGGGTTTCTTGGAAATACTGTTGATATTGACTGCTCTCCATCA
TGTCCTACTACTGAGGTTTTAGCTAATGTCTTATCTTGA
Protein sequenceShow/hide protein sequence
MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRACDFGMMYSYDTTPTLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTAE
AEYIAAVGESAAPVSPAVHAHRASEATKPSGPVTAERLPSDPPGFIHSQESSSTEGIFIPTPGDPRRSPAIPSGHSPFVHPPQSKLPTSEPDVVPTEIPPEDIPPPTDDP
IAPSSEGRPESPKGPKPPKRKTQQAKRNVTTKTSSKKIPANVPSVPIDGISFHHKESLIREFIVNLPDDFNDPSSADYQTVYIRGFKFVISPAVINGFLGNTVDIDCSPS
CPTTEVLANVLS