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Pay0012417 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0012417
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPMD domain-containing protein
Genome locationchr08:22605407..22606165
RNA-Seq ExpressionPay0012417
SyntenyPay0012417
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041757.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.6e-8798.08Show/hide
Query:  YMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEG
        ++ TMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEG
Subjt:  YMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEG

Query:  QTRWGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        QTRWGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Subjt:  QTRWGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]3.4e-6981.58Show/hide
Query:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
        M+YFTERFL GVRHLV+  DRNQ REDGLSL+VEKPW G+FADHWPRLDN+S+LPRLSVE+PL EGK+AWVLQSSIHNE PNS R LTLGQ LIEGQTRW
Subjt:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW

Query:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        GT+TKVP EFCFTDCYWEWLELVVGRN RLLYS  LY  VT   YTYDRNSD
Subjt:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]6.9e-7082.24Show/hide
Query:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
        M+YFTERFL GVRHLV+  DRNQ REDGLSL++EKPW G+FADHWPRLDN+S+LPRLSVEIPL EGK+AW+LQSSIHNE PNS R LTLGQ LIEGQTRW
Subjt:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW

Query:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        GTMTKVP EFCFTDCYWEWLELVVGRN RLLYS  LY  VTT  YTYDRNSD
Subjt:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]2.0e-6981.58Show/hide
Query:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
        M+YFTERFL GVRHLV+  DRNQ REDGLSL+VEKPW G+FADHWPRLDN+S+LPRLSVEIPL EGK+AW+LQSSIH+E PNS R LTLGQ LIEGQTRW
Subjt:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW

Query:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        GT+TKVPREFCFTDCYWEWLELVVGRN RLLYS  LY  VT   YTYDRNSD
Subjt:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

XP_008442010.1 PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo]2.7e-90100Show/hide
Query:  MQVYMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHL
        MQVYMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHL
Subjt:  MQVYMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHL

Query:  IEGQTRWGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        IEGQTRWGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Subjt:  IEGQTRWGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

TrEMBL top hitse value%identityAlignment
A0A1S3B4Q9 uncharacterized protein LOC1034860021.3e-90100Show/hide
Query:  MQVYMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHL
        MQVYMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHL
Subjt:  MQVYMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHL

Query:  IEGQTRWGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        IEGQTRWGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Subjt:  IEGQTRWGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

A0A5A7TZN9 Putative mitochondrial protein1.6e-6981.7Show/hide
Query:  TMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTR
        TM+YFTERFL GVRHL++  DRNQ REDGLSL+VEK W G+FADHWP LDN+S+LPRLSVEIPL EGK+AWVLQSSIHNE PNS R LTLGQ LIEGQTR
Subjt:  TMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTR

Query:  WGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        WGTMTKVP EFCFTDCYWEWLELVVGRN RLLYS  LY VVT   YTYDRNSD
Subjt:  WGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

A0A5A7U8L3 PMD domain-containing protein3.3e-7082.24Show/hide
Query:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
        M+YFTERFL GVRHLV+  DRNQ REDGLSL++EKPW G+FADHWPRLDN+S+LPRLSVEIPL EGK+AW+LQSSIHNE PNS R LTLGQ LIEGQTRW
Subjt:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW

Query:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        GTMTKVP EFCFTDCYWEWLELVVGRN RLLYS  LY  VTT  YTYDRNSD
Subjt:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

A0A5A7VHW8 PMD domain-containing protein9.7e-7081.58Show/hide
Query:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
        M+YFTERFL GVRHLV+  DRNQ REDGLSL+VEKPW G+FADHWPRLDN+S+LPRLSVEIPL EGK+AW+LQSSIH+E PNS R LTLGQ LIEGQTRW
Subjt:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW

Query:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        GT+TKVPREFCFTDCYWEWLELVVGRN RLLYS  LY  VT   YTYDRNSD
Subjt:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

A0A5D3DTH1 Putative mitochondrial protein1.8e-8798.08Show/hide
Query:  YMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEG
        ++ TMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEG
Subjt:  YMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEG

Query:  QTRWGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        QTRWGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Subjt:  QTRWGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTATATATGAGAACGATGATTTACTTCACAGAACGATTCTTGTTTGGAGTCCGACACCTTGTAGTATTTTATGATAGAAATCAACTAAGAGAAGATGGA
CTTAGTCTCCTTGTGGAGAAGCCATGGACTGGCTCTTTTGCAGATCATTGGCCACGCTTAGACAACAGCTCAATTCTTCCCAGATTGTCTGTGGAGATACCTTTA
TTTGAGGGAAAAACTGCATGGGTCCTACAGTCTTCTATCCATAACGAGGATCCTAATTCTGACAGAGTTCTCACTCTCGGACAACATTTAATTGAAGGCCAAACA
CGTTGGGGCACTATGACCAAGGTCCCTAGAGAGTTCTGCTTTACTGATTGCTATTGGGAGTGGCTAGAGCTTGTAGTTGGTCGAAATGCGCGACTTCTTTATAGT
GCTTGTTTATATGATGTCGTAACAACTTATTTCTACACTTATGATCGTAATAGTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTATATATGAGAACGATGATTTACTTCACAGAACGATTCTTGTTTGGAGTCCGACACCTTGTAGTATTTTATGATAGAAATCAACTAAGAGAAGATGGA
CTTAGTCTCCTTGTGGAGAAGCCATGGACTGGCTCTTTTGCAGATCATTGGCCACGCTTAGACAACAGCTCAATTCTTCCCAGATTGTCTGTGGAGATACCTTTA
TTTGAGGGAAAAACTGCATGGGTCCTACAGTCTTCTATCCATAACGAGGATCCTAATTCTGACAGAGTTCTCACTCTCGGACAACATTTAATTGAAGGCCAAACA
CGTTGGGGCACTATGACCAAGGTCCCTAGAGAGTTCTGCTTTACTGATTGCTATTGGGAGTGGCTAGAGCTTGTAGTTGGTCGAAATGCGCGACTTCTTTATAGT
GCTTGTTTATATGATGTCGTAACAACTTATTTCTACACTTATGATCGTAATAGTGATTAG
Protein sequenceShow/hide protein sequence
MQVYMRTMIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQT
RWGTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD