CuGenDBv2

Gene ID	Pay0012436
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ribonuclease H
Genome location	chr06:20859081..20860672
RNA-Seq Expression	Pay0012436
Synteny	Pay0012436
Gene Ontology terms	GO:0006310 - DNA recombination (biological process) GO:0071897 - DNA biosynthetic process (biological process) GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process) GO:0003723 - RNA binding (molecular function) GO:0003887 - DNA-directed DNA polymerase activity (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR002156 - Ribonuclease H domain IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0031752.1 uncharacterized protein E6C27_scaffold506G00150 [Cucumis melo var. makuwa]

2.0e-212

74.33

Show/hide

Query:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM
        MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVT GKFLGFIVRHRGIEVDHSKIDAIQKM
Subjt:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM

Query:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------
        PS KNLHELRRLQGRL YIRRFISNLA RCQPFQRLMRKDA+FDWDQSC+NAFDSIKKYLLN PVLSAPA GKPLIL                       
Subjt:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------

Query:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS
                                                                  VISGRLAKWAIILQQYDI+YIPQKAVKGQALADFL DHP+PS
Subjt:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS

Query:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ
        NWKLCDDLPDEEVLFVE MEPWIMFFDG ARRSGAGVGIVFISPEKHMLPYSFTLGE CSNNV EYQA IIGLQMASE        F + KL +     Q
Subjt:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ

Query:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG
        YEVKHQDLKPYF YARRLMDRFD+IILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPII+YLEHG
Subjt:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG

Query:  KLPTDPRIELKYMKSCMIYLLQRHTL
        KLPTDPR   +  +    ++  + TL
Subjt:  KLPTDPRIELKYMKSCMIYLLQRHTL

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]

2.6e-212

74.14

Show/hide

Query:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM
        MPFGLKNAGATYQRAMQRIFDDMLHKH+ECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVT GKFLGFIVRHRGIEVDHSKIDAIQKM
Subjt:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM

Query:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------
        PS KNLHELRRLQGRL YIRRFISNLA RCQPFQRLMRKDA+FDWDQSC+NAFDSIKKYLLN PVLSAPA GKPLIL                       
Subjt:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------

Query:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS
                                                                  VISGRLAKWAIILQQYDI+YIPQKAVKGQALADFL DHP+PS
Subjt:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS

Query:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ
        NWKLCDDLPDEEVLFVE MEPWIMFFDG ARRSGAGVGIVFISPEKHMLPYSFTLGE CSNNV EYQA IIGLQMASE        F + KL +     Q
Subjt:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ

Query:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG
        YEVKHQDLKPYF YARRLMDRFD+IILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPII+YLEHG
Subjt:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG

Query:  KLPTDPRIELKYMKSCMIYLLQRHTL
        KLPTDPR   +  +    ++  + TL
Subjt:  KLPTDPRIELKYMKSCMIYLLQRHTL

TYK02262.1 uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa]

2.0e-212

74.33

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Query:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM
        MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVT GKFLGFIVRHRGIEVDHSKIDAIQKM
Subjt:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM

Query:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------
        PS KNLHELRRLQGRL YIRRFISNLA RCQPFQRLMRKDA+FDWDQSC+NAFDSIKKYLLN PVLSAPA GKPLIL                       
Subjt:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------

Query:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS
                                                                  VISGRLAKWAIILQQYDI+YIPQKAVKGQALADFL DHP+PS
Subjt:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS

Query:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ
        NWKLCDDLPDEEVLFVE MEPWIMFFDG ARRSGAGVGIVFISPEKHMLPYSFTLGE CSNNV EYQA IIGLQMASE        F + KL +     Q
Subjt:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ

Query:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG
        YEVKHQDLKPYF YARRLMDRFD+IILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPII+YLEHG
Subjt:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG

Query:  KLPTDPRIELKYMKSCMIYLLQRHTL
        KLPTDPR   +  +    ++  + TL
Subjt:  KLPTDPRIELKYMKSCMIYLLQRHTL

TYK16275.1 uncharacterized protein E5676_scaffold21G00440 [Cucumis melo var. makuwa]

2.9e-211

73.67

Show/hide

Query:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM
        MPFGLKNAGATYQRAMQRIFDDMLHKH+ECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVT GKFLGFIVRHRGIEVDHSKIDAIQKM
Subjt:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM

Query:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------
        PS KNLHELRRLQGRL YIRRFISNLA RCQPFQRLMRKDA+FDWDQSC+NAFDSIKKYLLN PVLSAPA GKPLIL                       
Subjt:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------

Query:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS
                                                                  VISGRLAKWAIILQQYDI+YIPQKAVKGQALADFL DHP+PS
Subjt:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS

Query:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ
        NWKLCDDLPDEEVLFVE MEPWIMFFDG ARRSGAGVGIVFISPEKHMLPYSFTLGE CSNNV EYQA IIGLQMASE        F + KL +     Q
Subjt:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ

Query:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG
        YEVKHQDLKPYF YARRLMDRFD+ ILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEA VISVYAIDEEDWRQPII+YLEHG
Subjt:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG

Query:  KLPTDPRIELKYMKSCMIYLLQRHTLLT
        KLPTDPR   +  +    ++  + TL T
Subjt:  KLPTDPRIELKYMKSCMIYLLQRHTLLT

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]

2.6e-212

74.14

Show/hide

Query:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM
        MPFGLKNAGATYQRAMQRIFDDMLHKH+ECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVT GKFLGFIVRHRGIEVDHSKIDAIQKM
Subjt:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM

Query:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------
        PS KNLHELRRLQGRL YIRRFISNLA RCQPFQRLMRKDA+FDWDQSC+NAFDSIKKYLLN PVLSAPA GKPLIL                       
Subjt:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------

Query:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS
                                                                  VISGRLAKWAIILQQYDI+YIPQKAVKGQALADFL DHP+PS
Subjt:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS

Query:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ
        NWKLCDDLPDEEVLFVE MEPWIMFFDG ARRSGAGVGIVFISPEKHMLPYSFTLGE CSNNV EYQA IIGLQMASE        F + KL +     Q
Subjt:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ

Query:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG
        YEVKHQDLKPYF YARRLMDRFD+IILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPII+YLEHG
Subjt:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG

Query:  KLPTDPRIELKYMKSCMIYLLQRHTL
        KLPTDPR   +  +    ++  + TL
Subjt:  KLPTDPRIELKYMKSCMIYLLQRHTL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SKZ3 Ribonuclease H

9.7e-213

74.33

Show/hide

Query:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM
        MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVT GKFLGFIVRHRGIEVDHSKIDAIQKM
Subjt:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM

Query:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------
        PS KNLHELRRLQGRL YIRRFISNLA RCQPFQRLMRKDA+FDWDQSC+NAFDSIKKYLLN PVLSAPA GKPLIL                       
Subjt:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------

Query:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS
                                                                  VISGRLAKWAIILQQYDI+YIPQKAVKGQALADFL DHP+PS
Subjt:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS

Query:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ
        NWKLCDDLPDEEVLFVE MEPWIMFFDG ARRSGAGVGIVFISPEKHMLPYSFTLGE CSNNV EYQA IIGLQMASE        F + KL +     Q
Subjt:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ

Query:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG
        YEVKHQDLKPYF YARRLMDRFD+IILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPII+YLEHG
Subjt:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG

Query:  KLPTDPRIELKYMKSCMIYLLQRHTL
        KLPTDPR   +  +    ++  + TL
Subjt:  KLPTDPRIELKYMKSCMIYLLQRHTL

A0A5A7TZU9 Ribonuclease H

1.3e-212

74.14

Show/hide

Query:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM
        MPFGLKNAGATYQRAMQRIFDDMLHKH+ECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVT GKFLGFIVRHRGIEVDHSKIDAIQKM
Subjt:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM

Query:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------
        PS KNLHELRRLQGRL YIRRFISNLA RCQPFQRLMRKDA+FDWDQSC+NAFDSIKKYLLN PVLSAPA GKPLIL                       
Subjt:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------

Query:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS
                                                                  VISGRLAKWAIILQQYDI+YIPQKAVKGQALADFL DHP+PS
Subjt:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS

Query:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ
        NWKLCDDLPDEEVLFVE MEPWIMFFDG ARRSGAGVGIVFISPEKHMLPYSFTLGE CSNNV EYQA IIGLQMASE        F + KL +     Q
Subjt:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ

Query:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG
        YEVKHQDLKPYF YARRLMDRFD+IILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPII+YLEHG
Subjt:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG

Query:  KLPTDPRIELKYMKSCMIYLLQRHTL
        KLPTDPR   +  +    ++  + TL
Subjt:  KLPTDPRIELKYMKSCMIYLLQRHTL

A0A5D3BTY1 Ribonuclease H

9.7e-213

74.33

Show/hide

Query:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM
        MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVT GKFLGFIVRHRGIEVDHSKIDAIQKM
Subjt:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM

Query:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------
        PS KNLHELRRLQGRL YIRRFISNLA RCQPFQRLMRKDA+FDWDQSC+NAFDSIKKYLLN PVLSAPA GKPLIL                       
Subjt:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------

Query:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS
                                                                  VISGRLAKWAIILQQYDI+YIPQKAVKGQALADFL DHP+PS
Subjt:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS

Query:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ
        NWKLCDDLPDEEVLFVE MEPWIMFFDG ARRSGAGVGIVFISPEKHMLPYSFTLGE CSNNV EYQA IIGLQMASE        F + KL +     Q
Subjt:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ

Query:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG
        YEVKHQDLKPYF YARRLMDRFD+IILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPII+YLEHG
Subjt:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG

Query:  KLPTDPRIELKYMKSCMIYLLQRHTL
        KLPTDPR   +  +    ++  + TL
Subjt:  KLPTDPRIELKYMKSCMIYLLQRHTL

A0A5D3CXS1 Uncharacterized protein

1.4e-211

73.67

Show/hide

Query:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM
        MPFGLKNAGATYQRAMQRIFDDMLHKH+ECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVT GKFLGFIVRHRGIEVDHSKIDAIQKM
Subjt:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM

Query:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------
        PS KNLHELRRLQGRL YIRRFISNLA RCQPFQRLMRKDA+FDWDQSC+NAFDSIKKYLLN PVLSAPA GKPLIL                       
Subjt:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------

Query:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS
                                                                  VISGRLAKWAIILQQYDI+YIPQKAVKGQALADFL DHP+PS
Subjt:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS

Query:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ
        NWKLCDDLPDEEVLFVE MEPWIMFFDG ARRSGAGVGIVFISPEKHMLPYSFTLGE CSNNV EYQA IIGLQMASE        F + KL +     Q
Subjt:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ

Query:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG
        YEVKHQDLKPYF YARRLMDRFD+ ILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEA VISVYAIDEEDWRQPII+YLEHG
Subjt:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG

Query:  KLPTDPRIELKYMKSCMIYLLQRHTLLT
        KLPTDPR   +  +    ++  + TL T
Subjt:  KLPTDPRIELKYMKSCMIYLLQRHTLLT

A0A5D3D1E5 Ribonuclease H

1.3e-212

74.14

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Query:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM
        MPFGLKNAGATYQRAMQRIFDDMLHKH+ECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVT GKFLGFIVRHRGIEVDHSKIDAIQKM
Subjt:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM

Query:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------
        PS KNLHELRRLQGRL YIRRFISNLA RCQPFQRLMRKDA+FDWDQSC+NAFDSIKKYLLN PVLSAPA GKPLIL                       
Subjt:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILL----------------------

Query:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS
                                                                  VISGRLAKWAIILQQYDI+YIPQKAVKGQALADFL DHP+PS
Subjt:  ----------------------------------------------------------VISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS

Query:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ
        NWKLCDDLPDEEVLFVE MEPWIMFFDG ARRSGAGVGIVFISPEKHMLPYSFTLGE CSNNV EYQA IIGLQMASE        F + KL +     Q
Subjt:  NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASE--------FVNHKLAL----LQ

Query:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG
        YEVKHQDLKPYF YARRLMDRFD+IILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPII+YLEHG
Subjt:  YEVKHQDLKPYFRYARRLMDRFDNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHG

Query:  KLPTDPRIELKYMKSCMIYLLQRHTL
        KLPTDPR   +  +    ++  + TL
Subjt:  KLPTDPRIELKYMKSCMIYLLQRHTL

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.1e-24

30.26

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Query:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM
        MP+G+  A A +Q  +  I  +    H+ CY+DD+++ SK + +H+K +K VL +L+   L +N  KC F  +  KF+G+ +  +G       ID + + 
Subjt:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM

Query:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILLVISGRLAKWAIILQQYD
           KN  ELR+  G + Y+R+FI   +    P   L++KD  + W  +   A ++IK+ L++ PVL      K ++L   +  +A  A++ Q++D
Subjt:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILLVISGRLAKWAIILQQYD

P0CT35 Transposon Tf2-2 polyprotein

1.1e-24

30.26

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Query:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM
        MP+G+  A A +Q  +  I  +    H+ CY+DD+++ SK + +H+K +K VL +L+   L +N  KC F  +  KF+G+ +  +G       ID + + 
Subjt:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM

Query:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILLVISGRLAKWAIILQQYD
           KN  ELR+  G + Y+R+FI   +    P   L++KD  + W  +   A ++IK+ L++ PVL      K ++L   +  +A  A++ Q++D
Subjt:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILLVISGRLAKWAIILQQYD

P0CT36 Transposon Tf2-3 polyprotein

1.1e-24

30.26

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Query:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM
        MP+G+  A A +Q  +  I  +    H+ CY+DD+++ SK + +H+K +K VL +L+   L +N  KC F  +  KF+G+ +  +G       ID + + 
Subjt:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM

Query:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILLVISGRLAKWAIILQQYD
           KN  ELR+  G + Y+R+FI   +    P   L++KD  + W  +   A ++IK+ L++ PVL      K ++L   +  +A  A++ Q++D
Subjt:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILLVISGRLAKWAIILQQYD

P0CT37 Transposon Tf2-4 polyprotein

1.1e-24

30.26

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Query:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM
        MP+G+  A A +Q  +  I  +    H+ CY+DD+++ SK + +H+K +K VL +L+   L +N  KC F  +  KF+G+ +  +G       ID + + 
Subjt:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM

Query:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILLVISGRLAKWAIILQQYD
           KN  ELR+  G + Y+R+FI   +    P   L++KD  + W  +   A ++IK+ L++ PVL      K ++L   +  +A  A++ Q++D
Subjt:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILLVISGRLAKWAIILQQYD

P0CT41 Transposon Tf2-12 polyprotein

1.1e-24

30.26

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Query:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM
        MP+G+  A A +Q  +  I  +    H+ CY+DD+++ SK + +H+K +K VL +L+   L +N  KC F  +  KF+G+ +  +G       ID + + 
Subjt:  MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKM

Query:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILLVISGRLAKWAIILQQYD
           KN  ELR+  G + Y+R+FI   +    P   L++KD  + W  +   A ++IK+ L++ PVL      K ++L   +  +A  A++ Q++D
Subjt:  PSLKNLHELRRLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILLVISGRLAKWAIILQQYD

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCCTTTCGGTTTAAAAAATGCAGGTGCTACATACCAGCGCGCTATGCAAAGGATCTTTGATGATATGCTGCATAAACACATTGAATGTTATGTTGACGATCTTGTAGT
CAAGTCCAAGAAGAAATGCGATCACTTGAAAGACCTGAAGCTTGTACTTGATCGCCTCAGAAAATATCAACTAAGAATGAACCCTCTCAAGTGTGCATTTGGTGTAACTT
TAGGGAAGTTTTTGGGATTTATAGTGAGACATCGTGGCATCGAAGTTGATCACTCTAAAATTGATGCTATCCAAAAGATGCCAAGTTTGAAGAACTTGCATGAGTTGAGA
CGATTGCAAGGTCGTTTGACTTACATTAGAAGATTTATATCTAATCTTGCAAATCGATGTCAACCATTCCAGAGACTAATGAGGAAGGATGCAATCTTTGATTGGGACCA
GTCATGCAAAAATGCGTTTGATAGCATAAAGAAGTATCTGCTCAACTCTCCGGTCTTAAGTGCGCCTGCAGCTGGAAAACCATTAATATTGCTAGTCATCTCGGGACGCC
TCGCGAAGTGGGCTATAATACTCCAACAATATGATATTATATATATCCCCCAAAAAGCAGTGAAGGGCCAAGCATTGGCAGATTTCCTGGTTGATCATCCAATTCCTTCA
AATTGGAAGTTATGTGACGACTTACCTGATGAGGAAGTATTGTTTGTTGAAAGAATGGAGCCTTGGATCATGTTCTTTGATGGTGTGGCACGAAGAAGTGGAGCTGGTGT
TGGCATTGTCTTCATTTCTCCTGAGAAACATATGTTACCATATAGCTTCACACTCGGTGAGTTTTGTTCAAATAATGTTGTTGAGTACCAAGCACTGATCATTGGTCTAC
AAATGGCTTCAGAATTTGTTAATCATAAATTAGCTCTCCTACAGTACGAGGTAAAGCATCAAGACTTGAAGCCTTACTTTAGATATGCTAGAAGATTGATGGACAGATTC
GACAACATAATATTGGAGCATATACCGAGATCAGAAAATAAGAAAGCTGATGCACTTGCAAATTTGGCCACTGCTTTAACAGTCTCGGAAGACATACCAATAAACATTTC
CCTTTGCCAAAAATGGATTGTGCCTTCAATTGAAAGTCAATACGAAGAAGCTGATGTGATATCTGTGTATGCAATTGATGAAGAAGATTGGCGCCAGCCCATTATAAACT
ATTTGGAGCATGGAAAACTTCCCACCGATCCTCGAATAGAGCTGAAATACATGAAGAGCTGCATGATTTATTTATTACAGAGACACACTTTACTGACGCTCATATGA

mRNA sequence

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Protein sequence

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MPFGLKNAGATYQRAMQRIFDDMLHKHIECYVDDLVVKSKKKCDHLKDLKLVLDRLRKYQLRMNPLKCAFGVTLGKFLGFIVRHRGIEVDHSKIDAIQKMPSLKNLHELR
RLQGRLTYIRRFISNLANRCQPFQRLMRKDAIFDWDQSCKNAFDSIKKYLLNSPVLSAPAAGKPLILLVISGRLAKWAIILQQYDIIYIPQKAVKGQALADFLVDHPIPS
NWKLCDDLPDEEVLFVERMEPWIMFFDGVARRSGAGVGIVFISPEKHMLPYSFTLGEFCSNNVVEYQALIIGLQMASEFVNHKLALLQYEVKHQDLKPYFRYARRLMDRF
DNIILEHIPRSENKKADALANLATALTVSEDIPINISLCQKWIVPSIESQYEEADVISVYAIDEEDWRQPIINYLEHGKLPTDPRIELKYMKSCMIYLLQRHTLLTLI

Pay0012436 (gene) of Melon (Payzawat) v1 genome