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Pay0012859 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0012859
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
Genome locationchr06:27554852..27555085
RNA-Seq ExpressionPay0012859
SyntenyPay0012859
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037621.1 uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa]1.1e-3696.1Show/hide
Query:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
        MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNM+G+ELKNPVNSDYV+RYYA
Subjt:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
XP_031737561.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402452 [Cucumis sativus]5.4e-3696.1Show/hide
Query:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
        MRAYNKKVHPRSFREGDLVLKRILPF KDHRGKWTPNYEGPFVVKKAFSGGALLLTNM+GVELKNPVNSDYV+RYYA
Subjt:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
XP_031738551.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]5.4e-3696.1Show/hide
Query:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
        MRAYNKKVHPRSFREGDLVLKRILPF KDHRGKWTPNYEGPFVVKKAFSGGALLLTNM+GVELKNPVNSDYV+RYYA
Subjt:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
XP_031738857.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402780 [Cucumis sativus]5.4e-3696.1Show/hide
Query:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
        MRAYNKKVHPRSFREGDLVLKRILPF KDHRGKWTPNYEGPFVVKKAFSGGALLLTNM+GVELKNPVNSDYV+RYYA
Subjt:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
XP_031741309.1 LOW QUALITY PROTEIN: uncharacterized protein LOC105435093 [Cucumis sativus]5.4e-3696.1Show/hide
Query:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
        MRAYNKKVHPRSFREGDLVLKRILPF KDHRGKWTPNYEGPFVVKKAFSGGALLLTNM+GVELKNPVNSDYV+RYYA
Subjt:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
TrEMBL top hitse value%identityAlignment
A0A5A7T1D0 RNA-directed DNA polymerase1.3e-3594.81Show/hide
Query:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
        MRAYNKKVH RSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNM+GVELK+PVNSDYV+RYYA
Subjt:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
A0A5A7T7R4 Ribonuclease H5.2e-3796.1Show/hide
Query:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
        MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNM+G+ELKNPVNSDYV+RYYA
Subjt:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
A0A5D3CXE2 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H9.8e-3693.51Show/hide
Query:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
        MRAYNKKVHPRSFREGDL+LKRILPFQKDHRGKWTPNYEGPFVVKKAFSG ALLLTNM+GVELKNP+NSDYV+RYYA
Subjt:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
A0A5D3DNF8 Gypsy retrotransposon integrase-like protein 13.9e-3289.61Show/hide
Query:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
        MRAYNKKVH RSF+EGDLVLKRI PFQKDHR KWTPNYEGPFVVKKAFSGGALLLTNM+ VE KN VNSDYVQRYYA
Subjt:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
A0A5D3E1A3 RNA-directed DNA polymerase1.9e-3493.51Show/hide
Query:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
        MRAYNKKVH RSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFS GALLLTNM+ VELKNPVNSDYV+RYYA
Subjt:  MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGCATACAATAAGAAAGTGCATCCTCGAAGTTTTCGAGAGGGAGATTTGGTATTAAAAAGAATACTTCCATTTCAAAAGGATCATCGAGGAAAATGGACTCCTAA
TTATGAAGGTCCATTCGTAGTGAAAAAAGCTTTTTCAGGAGGAGCTCTACTTTTGACTAATATGAATGGCGTTGAGTTAAAAAATCCTGTGAATTCAGATTATGTTCAAA
GATATTATGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGCATACAATAAGAAAGTGCATCCTCGAAGTTTTCGAGAGGGAGATTTGGTATTAAAAAGAATACTTCCATTTCAAAAGGATCATCGAGGAAAATGGACTCCTAA
TTATGAAGGTCCATTCGTAGTGAAAAAAGCTTTTTCAGGAGGAGCTCTACTTTTGACTAATATGAATGGCGTTGAGTTAAAAAATCCTGTGAATTCAGATTATGTTCAAA
GATATTATGCATGA
Protein sequenceShow/hide protein sequence
MRAYNKKVHPRSFREGDLVLKRILPFQKDHRGKWTPNYEGPFVVKKAFSGGALLLTNMNGVELKNPVNSDYVQRYYA