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Pay0012899 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0012899
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionADP-ribosylation factor-like protein 2
Genome locationchr08:392423..396528
RNA-Seq ExpressionPay0012899
SyntenyPay0012899
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR006689 - Small GTPase superfamily, ARF/SAR type
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025655.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]3.2e-2598.39Show/hide
Query:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ
        MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHV+Q
Subjt:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ

KAA0037920.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.8e-2391.94Show/hide
Query:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ
        MVMG VGEVAYLLDLPDTAKIHP+FHVSQLKRAVGDKH+IQPDISVI+DQMELVVEPDHV+Q
Subjt:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ

KAA0039535.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.6e-2495.16Show/hide
Query:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ
        MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKH+IQPDISVI+DQMELVVEPDHV+Q
Subjt:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ

TYK03080.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.0e-2391.94Show/hide
Query:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ
        MVMGRVGEV YLLDLPDTAKIHPVFHVSQLKRAVGDKH+IQPDIS+I+DQMELVVEPDHV+Q
Subjt:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ

XP_016899189.1 PREDICTED: ADP-ribosylation factor-like protein 2 [Cucumis melo]1.7e-6390.71Show/hide
Query:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQGFNVETVEYKKMSCTVWDVGGQDK----------NTQE
        MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQGFNVETVEYK MSCTVWDVGGQDK          NTQE
Subjt:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQGFNVETVEYKKMSCTVWDVGGQDK----------NTQE

Query:  LVFVVDSDDRDKICEARNELHRILNVVYSTLNFHSHYAFA
        LVFVVDSDDRDKICEA NELHRILN VYSTLNFHSHYAFA
Subjt:  LVFVVDSDDRDKICEARNELHRILNVVYSTLNFHSHYAFA

TrEMBL top hitse value%identityAlignment
A0A1S4DT74 ADP-ribosylation factor-like protein 28.5e-6490.71Show/hide
Query:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQGFNVETVEYKKMSCTVWDVGGQDK----------NTQE
        MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQGFNVETVEYK MSCTVWDVGGQDK          NTQE
Subjt:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQGFNVETVEYKKMSCTVWDVGGQDK----------NTQE

Query:  LVFVVDSDDRDKICEARNELHRILNVVYSTLNFHSHYAFA
        LVFVVDSDDRDKICEA NELHRILN VYSTLNFHSHYAFA
Subjt:  LVFVVDSDDRDKICEARNELHRILNVVYSTLNFHSHYAFA

A0A5A7T3K8 Ty3-gypsy retrotransposon protein8.6e-2491.94Show/hide
Query:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ
        MVMG VGEVAYLLDLPDTAKIHP+FHVSQLKRAVGDKH+IQPDISVI+DQMELVVEPDHV+Q
Subjt:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ

A0A5D3BVC8 Ty3-gypsy retrotransposon protein5.0e-2491.94Show/hide
Query:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ
        MVMGRVGEV YLLDLPDTAKIHPVFHVSQLKRAVGDKH+IQPDIS+I+DQMELVVEPDHV+Q
Subjt:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ

A0A5D3CMZ9 Transposon Ty3-I Gag-Pol polyprotein1.6e-2598.39Show/hide
Query:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ
        MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHV+Q
Subjt:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ

A0A5D3CVM7 Ty3-gypsy retrotransposon protein7.7e-2595.16Show/hide
Query:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ
        MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKH+IQPDISVI+DQMELVVEPDHV+Q
Subjt:  MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQ

SwissProt top hitse value%identityAlignment
P0DH91 ADP-ribosylation factor 2-B4.8e-1666.15Show/hide
Query:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN
        T GFNVETVEYK +S TVWDVGGQDK          NTQ L+FVVDS+DRD++ EAR+ELHR+LN
Subjt:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN

P36397 ADP-ribosylation factor 14.8e-1666.15Show/hide
Query:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN
        T GFNVETVEYK +S TVWDVGGQDK          NTQ L+FVVDS+DRD++ EAR+ELHR+LN
Subjt:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN

P49076 ADP-ribosylation factor4.8e-1666.15Show/hide
Query:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN
        T GFNVETVEYK +S TVWDVGGQDK          NTQ L+FVVDS+DRD++ EAR+ELHR+LN
Subjt:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN

P51822 ADP-ribosylation factor 14.8e-1666.15Show/hide
Query:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN
        T GFNVETVEYK +S TVWDVGGQDK          NTQ L+FVVDS+DRD++ EAR+ELHR+LN
Subjt:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN

Q9LQC8 ADP-ribosylation factor 2-A4.8e-1666.15Show/hide
Query:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN
        T GFNVETVEYK +S TVWDVGGQDK          NTQ L+FVVDS+DRD++ EAR+ELHR+LN
Subjt:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN

Arabidopsis top hitse value%identityAlignment
AT1G10630.1 ADP-ribosylation factor A1F3.4e-1766.15Show/hide
Query:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN
        T GFNVETVEYK +S TVWDVGGQDK          NTQ L+FVVDS+DRD++ EAR+ELHR+LN
Subjt:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN

AT1G23490.1 ADP-ribosylation factor 13.4e-1766.15Show/hide
Query:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN
        T GFNVETVEYK +S TVWDVGGQDK          NTQ L+FVVDS+DRD++ EAR+ELHR+LN
Subjt:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN

AT1G70490.1 Ras-related small GTP-binding family protein3.4e-1766.15Show/hide
Query:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN
        T GFNVETVEYK +S TVWDVGGQDK          NTQ L+FVVDS+DRD++ EAR+ELHR+LN
Subjt:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN

AT1G70490.2 Ras-related small GTP-binding family protein3.4e-1766.15Show/hide
Query:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN
        T GFNVETVEYK +S TVWDVGGQDK          NTQ L+FVVDS+DRD++ EAR+ELHR+LN
Subjt:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN

AT1G70490.3 Ras-related small GTP-binding family protein3.4e-1766.15Show/hide
Query:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN
        T GFNVETVEYK +S TVWDVGGQDK          NTQ L+FVVDS+DRD++ EAR+ELHR+LN
Subjt:  TQGFNVETVEYKKMSCTVWDVGGQDK----------NTQELVFVVDSDDRDKICEARNELHRILN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAATGGGACGAGTTGGCGAGGTTGCTTATTTGTTGGACCTCCCGGACACGGCCAAAATTCACCCAGTCTTCCATGTTTCTCAATTAAAACGAGCGGTGGGGGATAA
ACACATGATTCAACCGGACATCTCAGTGATAAGTGACCAGATGGAACTTGTTGTAGAGCCCGACCACGTTACGCAAGGGTTCAATGTGGAAACAGTAGAATACAAAAAAA
TGAGCTGCACTGTCTGGGATGTTGGAGGACAAGATAAGAACACCCAAGAACTTGTATTTGTTGTAGATAGCGATGACAGAGACAAAATTTGTGAAGCTCGTAATGAGTTG
CATCGTATTCTCAATGTGGTATACTCTACACTGAATTTTCATTCTCACTATGCTTTTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAATGGGACGAGTTGGCGAGGTTGCTTATTTGTTGGACCTCCCGGACACGGCCAAAATTCACCCAGTCTTCCATGTTTCTCAATTAAAACGAGCGGTGGGGGATAA
ACACATGATTCAACCGGACATCTCAGTGATAAGTGACCAGATGGAACTTGTTGTAGAGCCCGACCACGTTACGCAAGGGTTCAATGTGGAAACAGTAGAATACAAAAAAA
TGAGCTGCACTGTCTGGGATGTTGGAGGACAAGATAAGAACACCCAAGAACTTGTATTTGTTGTAGATAGCGATGACAGAGACAAAATTTGTGAAGCTCGTAATGAGTTG
CATCGTATTCTCAATGTGGTATACTCTACACTGAATTTTCATTCTCACTATGCTTTTGCTTAG
Protein sequenceShow/hide protein sequence
MVMGRVGEVAYLLDLPDTAKIHPVFHVSQLKRAVGDKHMIQPDISVISDQMELVVEPDHVTQGFNVETVEYKKMSCTVWDVGGQDKNTQELVFVVDSDDRDKICEARNEL
HRILNVVYSTLNFHSHYAFA