; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0012932 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0012932
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr04:15663581..15666198
RNA-Seq ExpressionPay0012932
SyntenyPay0012932
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR005162 - Retrotransposon gag domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037703.1 uncharacterized protein E6C27_scaffold1593G00270 [Cucumis melo var. makuwa]1.9e-17882.62Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYFTQNPNSITQQENHVRDPMSTPITE
        MDEQTNDQVQAVRQDVEGLK+QLAKILEL T GR KSVAGISSQ+EVDLNQVLEDMPAYP GFTPQRSSSPRMTY TQNPN ITQQ +HV DPMSTPIT+
Subjt:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYFTQNPNSITQQENHVRDPMSTPITE

Query:  SGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
        SGKKI EEQ SRKRLE +EERLR IEGADMYGSIDATQLCLIS VVIPPKFKTPDFEKYNGTTCPKSHLVMYC+KMSAYA+DDKLLIHCFQDSLVGPTSR
Subjt:  SGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR

Query:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSASTNFSDIIT
        WYMQLDGSQVHRWKDLADSFLKQY YNID  PDRLDLQRMEKKNVETFKEYA RWRELA QVQP LTDKELMAMFI+TLRAPYYDRMVGSASTNFSD+IT
Subjt:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSASTNFSDIIT

Query:  IGERIEFG------------IRRMMTPKKKEEEIHDWKQT---------YFDPIPMSYI----ELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC
        IGE IEFG            IRRMMTPKKKEEEIH+   T                SY     E LP+LLKSHQVAI+PQEPLQPPYPKWYDPNVKC
Subjt:  IGERIEFG------------IRRMMTPKKKEEEIHDWKQT---------YFDPIPMSYI----ELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC

KAA0055146.1 uncharacterized protein E6C27_scaffold231G00770 [Cucumis melo var. makuwa]2.1e-18580.48Show/hide
Query:  QVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYFTQNPNSITQQENHVRDPMSTPITESGKKILE
        +VQAVRQDVEGLK+QLAKILELLT GRGKSV GISSQ+EVDLNQVLEDMPAYP GFTPQRSSSP MTY TQNPN ITQQENHV DPMSTPITESGKKI E
Subjt:  QVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYFTQNPNSITQQENHVRDPMSTPITESGKKILE

Query:  EQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSRWYMQLDG
        EQGSRKRLE +EERLRAI+GADMYGSIDATQLCLIS VVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYA+D+KLLIHCFQDSLVGP SRWYMQLDG
Subjt:  EQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSRWYMQLDG

Query:  SQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSASTNFSDIITIGERIEF
        SQVHRWKDLADSFLKQYKYNID APDRLDLQRMEKKNVETFKEYA RWRELAAQVQP LTDKELMAMFI+TLRAPYYDRMVGSASTNFSD+ITIGERIEF
Subjt:  SQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSASTNFSDIITIGERIEF

Query:  G------------IRRMMTPKKKEEEIHD-------------------------------------------WKQTYFDPIPMSYIELLPKLLKSHQVAI
        G            IRRMMTPKKKEEEIH+                                           WKQTYFDPIPMSY ELLP+LLKSHQVAI
Subjt:  G------------IRRMMTPKKKEEEIHD-------------------------------------------WKQTYFDPIPMSYIELLPKLLKSHQVAI

Query:  IPQEPLQPPYPKWYDPNVKC
        +PQEPLQPPYPKWYDPNVKC
Subjt:  IPQEPLQPPYPKWYDPNVKC

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]8.0e-17774.71Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRM-------TYFTQNPNSITQQENHVRDP
        MDEQTNDQVQAVRQDVEGLK+QLAKILELLT GRGKSVAG SSQ+EVDLNQVLEDMPAYPPGFTPQRSSSPRM       ++ T NPN+ TQQ  H  +P
Subjt:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRM-------TYFTQNPNSITQQENHVRDP

Query:  MSTPITESGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDS
        +ST I E GKKI EEQGSR+RLE +EERLR IEGADMYGSIDATQLCLIS VVIPPKFKTPDFEKYNGT+CPKSHLVMYCRKMSAYA+DDKLLIHCFQD+
Subjt:  MSTPITESGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDS

Query:  LVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSAST
        LVGP SRWYMQLDGSQVHRWKDLADSFLKQYKYNID APDRLDLQRMEKKNVETFKEYA RWRELAAQVQP  TDKEL AMFI+TLRAPYYDRMVGSAST
Subjt:  LVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSAST

Query:  NFSDIITIGERIEFGI------------RRMMTPKKKEEEIHD--------------------------------------------WKQTYFDPIPMSY
        NFSD+ITIGERIEFG+            RR+MTPKKKE E+H+                                            WKQT FDPIPMSY
Subjt:  NFSDIITIGERIEFGI------------RRMMTPKKKEEEIHD--------------------------------------------WKQTYFDPIPMSY

Query:  IELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC
         ELLP+L+KSHQVAI+PQEPLQPPYPKWYDPN KC
Subjt:  IELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]8.0e-17775.17Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRM---TYFTQ----NPNSITQQENHVRDP
        MDEQTNDQVQAVRQDVEGLK+QLAKILELLT GRGKSV G SSQ+EVDLNQVLEDMP YPPGFTPQRSSSPRM   TY T     NPN+ TQQ  H  +P
Subjt:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRM---TYFTQ----NPNSITQQENHVRDP

Query:  MSTPITESGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDS
        +ST I E GKKI EEQGSR+RLE +EERLR IEGADMYGSIDATQLCLIS VVIPPKFKTPDFEKYNGT+CPKSHLVMYCRKMSAYA+DDKLLIHCFQDS
Subjt:  MSTPITESGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDS

Query:  LVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSAST
        LVGP SRWYMQLDGSQVHRWKDLADSFLKQYKYNID APDRLDLQRMEKKNVETFKEYA RWRELAAQVQP LTDKEL AMFI+TLRAPYYDRMVGSAST
Subjt:  LVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSAST

Query:  NFSDIITIGERIEFGI------------RRMMTPKKKEEEIHD--------------------------------------------WKQTYFDPIPMSY
        NFSD+ITIGERIEFG+            RR+MTPKKKE E+H+                                            WKQT FDPIPMSY
Subjt:  NFSDIITIGERIEFGI------------RRMMTPKKKEEEIHD--------------------------------------------WKQTYFDPIPMSY

Query:  IELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC
         ELLP+L+KSHQVAI+PQEPLQPPYPKWYDPN KC
Subjt:  IELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC

XP_016903339.1 PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo]1.9e-17882.62Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYFTQNPNSITQQENHVRDPMSTPITE
        MDEQTNDQVQAVRQDVEGLK+QLAKILEL T GR KSVAGISSQ+EVDLNQVLEDMPAYP GFTPQRSSSPRMTY TQNPN ITQQ +HV DPMSTPIT+
Subjt:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYFTQNPNSITQQENHVRDPMSTPITE

Query:  SGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
        SGKKI EEQ SRKRLE +EERLR IEGADMYGSIDATQLCLIS VVIPPKFKTPDFEKYNGTTCPKSHLVMYC+KMSAYA+DDKLLIHCFQDSLVGPTSR
Subjt:  SGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR

Query:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSASTNFSDIIT
        WYMQLDGSQVHRWKDLADSFLKQY YNID  PDRLDLQRMEKKNVETFKEYA RWRELA QVQP LTDKELMAMFI+TLRAPYYDRMVGSASTNFSD+IT
Subjt:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSASTNFSDIIT

Query:  IGERIEFG------------IRRMMTPKKKEEEIHDWKQT---------YFDPIPMSYI----ELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC
        IGE IEFG            IRRMMTPKKKEEEIH+   T                SY     E LP+LLKSHQVAI+PQEPLQPPYPKWYDPNVKC
Subjt:  IGERIEFG------------IRRMMTPKKKEEEIHDWKQT---------YFDPIPMSYI----ELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC

TrEMBL top hitse value%identityAlignment
A0A1S4E534 uncharacterized protein LOC1035028389.2e-17982.62Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYFTQNPNSITQQENHVRDPMSTPITE
        MDEQTNDQVQAVRQDVEGLK+QLAKILEL T GR KSVAGISSQ+EVDLNQVLEDMPAYP GFTPQRSSSPRMTY TQNPN ITQQ +HV DPMSTPIT+
Subjt:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYFTQNPNSITQQENHVRDPMSTPITE

Query:  SGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
        SGKKI EEQ SRKRLE +EERLR IEGADMYGSIDATQLCLIS VVIPPKFKTPDFEKYNGTTCPKSHLVMYC+KMSAYA+DDKLLIHCFQDSLVGPTSR
Subjt:  SGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR

Query:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSASTNFSDIIT
        WYMQLDGSQVHRWKDLADSFLKQY YNID  PDRLDLQRMEKKNVETFKEYA RWRELA QVQP LTDKELMAMFI+TLRAPYYDRMVGSASTNFSD+IT
Subjt:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSASTNFSDIIT

Query:  IGERIEFG------------IRRMMTPKKKEEEIHDWKQT---------YFDPIPMSYI----ELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC
        IGE IEFG            IRRMMTPKKKEEEIH+   T                SY     E LP+LLKSHQVAI+PQEPLQPPYPKWYDPNVKC
Subjt:  IGERIEFG------------IRRMMTPKKKEEEIHDWKQT---------YFDPIPMSYI----ELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC

A0A5A7T401 Retrotrans_gag domain-containing protein9.2e-17982.62Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYFTQNPNSITQQENHVRDPMSTPITE
        MDEQTNDQVQAVRQDVEGLK+QLAKILEL T GR KSVAGISSQ+EVDLNQVLEDMPAYP GFTPQRSSSPRMTY TQNPN ITQQ +HV DPMSTPIT+
Subjt:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYFTQNPNSITQQENHVRDPMSTPITE

Query:  SGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR
        SGKKI EEQ SRKRLE +EERLR IEGADMYGSIDATQLCLIS VVIPPKFKTPDFEKYNGTTCPKSHLVMYC+KMSAYA+DDKLLIHCFQDSLVGPTSR
Subjt:  SGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSR

Query:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSASTNFSDIIT
        WYMQLDGSQVHRWKDLADSFLKQY YNID  PDRLDLQRMEKKNVETFKEYA RWRELA QVQP LTDKELMAMFI+TLRAPYYDRMVGSASTNFSD+IT
Subjt:  WYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSASTNFSDIIT

Query:  IGERIEFG------------IRRMMTPKKKEEEIHDWKQT---------YFDPIPMSYI----ELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC
        IGE IEFG            IRRMMTPKKKEEEIH+   T                SY     E LP+LLKSHQVAI+PQEPLQPPYPKWYDPNVKC
Subjt:  IGERIEFG------------IRRMMTPKKKEEEIHDWKQT---------YFDPIPMSYI----ELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC

A0A5A7ULI2 Retrotrans_gag domain-containing protein1.0e-18580.48Show/hide
Query:  QVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYFTQNPNSITQQENHVRDPMSTPITESGKKILE
        +VQAVRQDVEGLK+QLAKILELLT GRGKSV GISSQ+EVDLNQVLEDMPAYP GFTPQRSSSP MTY TQNPN ITQQENHV DPMSTPITESGKKI E
Subjt:  QVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYFTQNPNSITQQENHVRDPMSTPITESGKKILE

Query:  EQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSRWYMQLDG
        EQGSRKRLE +EERLRAI+GADMYGSIDATQLCLIS VVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYA+D+KLLIHCFQDSLVGP SRWYMQLDG
Subjt:  EQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSRWYMQLDG

Query:  SQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSASTNFSDIITIGERIEF
        SQVHRWKDLADSFLKQYKYNID APDRLDLQRMEKKNVETFKEYA RWRELAAQVQP LTDKELMAMFI+TLRAPYYDRMVGSASTNFSD+ITIGERIEF
Subjt:  SQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSASTNFSDIITIGERIEF

Query:  G------------IRRMMTPKKKEEEIHD-------------------------------------------WKQTYFDPIPMSYIELLPKLLKSHQVAI
        G            IRRMMTPKKKEEEIH+                                           WKQTYFDPIPMSY ELLP+LLKSHQVAI
Subjt:  G------------IRRMMTPKKKEEEIHD-------------------------------------------WKQTYFDPIPMSYIELLPKLLKSHQVAI

Query:  IPQEPLQPPYPKWYDPNVKC
        +PQEPLQPPYPKWYDPNVKC
Subjt:  IPQEPLQPPYPKWYDPNVKC

A0A5A7V681 Retrotrans_gag domain-containing protein3.9e-17774.71Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRM-------TYFTQNPNSITQQENHVRDP
        MDEQTNDQVQAVRQDVEGLK+QLAKILELLT GRGKSVAG SSQ+EVDLNQVLEDMPAYPPGFTPQRSSSPRM       ++ T NPN+ TQQ  H  +P
Subjt:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRM-------TYFTQNPNSITQQENHVRDP

Query:  MSTPITESGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDS
        +ST I E GKKI EEQGSR+RLE +EERLR IEGADMYGSIDATQLCLIS VVIPPKFKTPDFEKYNGT+CPKSHLVMYCRKMSAYA+DDKLLIHCFQD+
Subjt:  MSTPITESGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDS

Query:  LVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSAST
        LVGP SRWYMQLDGSQVHRWKDLADSFLKQYKYNID APDRLDLQRMEKKNVETFKEYA RWRELAAQVQP  TDKEL AMFI+TLRAPYYDRMVGSAST
Subjt:  LVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSAST

Query:  NFSDIITIGERIEFGI------------RRMMTPKKKEEEIHD--------------------------------------------WKQTYFDPIPMSY
        NFSD+ITIGERIEFG+            RR+MTPKKKE E+H+                                            WKQT FDPIPMSY
Subjt:  NFSDIITIGERIEFGI------------RRMMTPKKKEEEIHD--------------------------------------------WKQTYFDPIPMSY

Query:  IELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC
         ELLP+L+KSHQVAI+PQEPLQPPYPKWYDPN KC
Subjt:  IELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC

A0A5A7VAU5 Uncharacterized protein3.9e-17775.17Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRM---TYFTQ----NPNSITQQENHVRDP
        MDEQTNDQVQAVRQDVEGLK+QLAKILELLT GRGKSV G SSQ+EVDLNQVLEDMP YPPGFTPQRSSSPRM   TY T     NPN+ TQQ  H  +P
Subjt:  MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRM---TYFTQ----NPNSITQQENHVRDP

Query:  MSTPITESGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDS
        +ST I E GKKI EEQGSR+RLE +EERLR IEGADMYGSIDATQLCLIS VVIPPKFKTPDFEKYNGT+CPKSHLVMYCRKMSAYA+DDKLLIHCFQDS
Subjt:  MSTPITESGKKILEEQGSRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDS

Query:  LVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSAST
        LVGP SRWYMQLDGSQVHRWKDLADSFLKQYKYNID APDRLDLQRMEKKNVETFKEYA RWRELAAQVQP LTDKEL AMFI+TLRAPYYDRMVGSAST
Subjt:  LVGPTSRWYMQLDGSQVHRWKDLADSFLKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSAST

Query:  NFSDIITIGERIEFGI------------RRMMTPKKKEEEIHD--------------------------------------------WKQTYFDPIPMSY
        NFSD+ITIGERIEFG+            RR+MTPKKKE E+H+                                            WKQT FDPIPMSY
Subjt:  NFSDIITIGERIEFGI------------RRMMTPKKKEEEIHD--------------------------------------------WKQTYFDPIPMSY

Query:  IELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC
         ELLP+L+KSHQVAI+PQEPLQPPYPKWYDPN KC
Subjt:  IELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKC

SwissProt top hitse value%identityAlignment
P03360 Gag-Pol polyprotein (Fragment)2.9e-0441.07Show/hide
Query:  LKVSNGHRFILVAKDYFTKWVEAASYKSVTKQAVVKFIRKDIICWYGLPERIITDN
        +    G++++LV  D F+ WVEA   K  T Q V+K +  DII  +GLP +I +DN
Subjt:  LKVSNGHRFILVAKDYFTKWVEAASYKSVTKQAVVKFIRKDIICWYGLPERIITDN

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGAACAATTGGCAAAGATCTTAGAACTACTTACTATTGGAAGAGGAAAGAG
TGTTGCGGGGATTTCATCACAATTGGAAGTAGATCTGAACCAGGTGCTAGAAGACATGCCTGCATACCCTCCAGGTTTTACTCCTCAAAGGTCGTCTAGTCCTCGCATGA
CTTATTTTACACAAAATCCTAATTCGATCACCCAACAGGAAAACCATGTGAGGGATCCAATGTCTACTCCAATTACAGAAAGTGGTAAGAAAATTTTAGAAGAGCAGGGT
AGTAGAAAAAGACTGGAATCCGTAGAAGAAAGATTACGCGCCATTGAAGGTGCAGACATGTATGGGAGTATCGACGCAACACAACTATGTTTGATATCATATGTGGTGAT
CCCTCCCAAATTCAAGACTCCAGATTTTGAGAAGTACAATGGAACCACGTGTCCAAAAAGTCATCTAGTTATGTACTGTCGGAAAATGTCAGCTTACGCTTATGATGATA
AATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGACTTCTCGCTGGTACATGCAATTGGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCTGATTCTTTT
TTAAAACAATATAAGTACAACATTGATACGGCACCCGATCGCCTGGATCTTCAGAGAATGGAAAAAAAGAATGTTGAAACTTTTAAGGAATATGCACATCGATGGAGAGA
GTTAGCTGCACAAGTGCAACCTCTCCTGACCGATAAAGAATTGATGGCTATGTTCATAAGCACTCTTCGGGCCCCATACTATGATAGAATGGTTGGAAGTGCTTCAACTA
ATTTCTCGGACATCATAACCATTGGAGAGAGGATTGAATTTGGAATAAGAAGAATGATGACCCCAAAGAAAAAAGAAGAAGAAATACATGATTGGAAGCAAACCTATTTT
GATCCCATACCTATGTCATATATAGAGCTTTTGCCTAAACTTTTAAAGAGTCATCAAGTGGCTATCATACCACAAGAGCCTTTGCAACCACCATATCCTAAGTGGTATGA
CCCCAACGTAAAATGCAGAAATGTAAACCTATCACAAGTTGAGCTAAAGGTATCAAATGGCCATCGATTCATTTTGGTAGCCAAAGATTATTTCACGAAATGGGTAGAGG
CTGCTTCATACAAAAGTGTCACCAAGCAGGCTGTTGTCAAGTTCATACGAAAGGACATTATATGTTGGTATGGTTTACCTGAGCGCATCATCACCGATAATGAAAAACCC
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGATTGAAAGAACAATTGGCAAAGATCTTAGAACTACTTACTATTGGAAGAGGAAAGAG
TGTTGCGGGGATTTCATCACAATTGGAAGTAGATCTGAACCAGGTGCTAGAAGACATGCCTGCATACCCTCCAGGTTTTACTCCTCAAAGGTCGTCTAGTCCTCGCATGA
CTTATTTTACACAAAATCCTAATTCGATCACCCAACAGGAAAACCATGTGAGGGATCCAATGTCTACTCCAATTACAGAAAGTGGTAAGAAAATTTTAGAAGAGCAGGGT
AGTAGAAAAAGACTGGAATCCGTAGAAGAAAGATTACGCGCCATTGAAGGTGCAGACATGTATGGGAGTATCGACGCAACACAACTATGTTTGATATCATATGTGGTGAT
CCCTCCCAAATTCAAGACTCCAGATTTTGAGAAGTACAATGGAACCACGTGTCCAAAAAGTCATCTAGTTATGTACTGTCGGAAAATGTCAGCTTACGCTTATGATGATA
AATTGTTGATTCATTGCTTCCAAGACAGCTTAGTCGGCCCGACTTCTCGCTGGTACATGCAATTGGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCTGATTCTTTT
TTAAAACAATATAAGTACAACATTGATACGGCACCCGATCGCCTGGATCTTCAGAGAATGGAAAAAAAGAATGTTGAAACTTTTAAGGAATATGCACATCGATGGAGAGA
GTTAGCTGCACAAGTGCAACCTCTCCTGACCGATAAAGAATTGATGGCTATGTTCATAAGCACTCTTCGGGCCCCATACTATGATAGAATGGTTGGAAGTGCTTCAACTA
ATTTCTCGGACATCATAACCATTGGAGAGAGGATTGAATTTGGAATAAGAAGAATGATGACCCCAAAGAAAAAAGAAGAAGAAATACATGATTGGAAGCAAACCTATTTT
GATCCCATACCTATGTCATATATAGAGCTTTTGCCTAAACTTTTAAAGAGTCATCAAGTGGCTATCATACCACAAGAGCCTTTGCAACCACCATATCCTAAGTGGTATGA
CCCCAACGTAAAATGCAGAAATGTAAACCTATCACAAGTTGAGCTAAAGGTATCAAATGGCCATCGATTCATTTTGGTAGCCAAAGATTATTTCACGAAATGGGTAGAGG
CTGCTTCATACAAAAGTGTCACCAAGCAGGCTGTTGTCAAGTTCATACGAAAGGACATTATATGTTGGTATGGTTTACCTGAGCGCATCATCACCGATAATGAAAAACCC
TGA
Protein sequenceShow/hide protein sequence
MDEQTNDQVQAVRQDVEGLKEQLAKILELLTIGRGKSVAGISSQLEVDLNQVLEDMPAYPPGFTPQRSSSPRMTYFTQNPNSITQQENHVRDPMSTPITESGKKILEEQG
SRKRLESVEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAYDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSF
LKQYKYNIDTAPDRLDLQRMEKKNVETFKEYAHRWRELAAQVQPLLTDKELMAMFISTLRAPYYDRMVGSASTNFSDIITIGERIEFGIRRMMTPKKKEEEIHDWKQTYF
DPIPMSYIELLPKLLKSHQVAIIPQEPLQPPYPKWYDPNVKCRNVNLSQVELKVSNGHRFILVAKDYFTKWVEAASYKSVTKQAVVKFIRKDIICWYGLPERIITDNEKP