CuGenDBv2

Gene ID	Pay0012976
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Transcription initiation factor TFIID subunit 10
Genome location	chr03:25543944..25547460
RNA-Seq Expression	Pay0012976
Synteny	Pay0012976
Gene Ontology terms	GO:0006367 - transcription initiation from RNA polymerase II promoter (biological process) GO:0006413 - translational initiation (biological process) GO:0016573 - histone acetylation (biological process) GO:0000124 - SAGA complex (cellular component) GO:0005669 - transcription factor TFIID complex (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003743 - translation initiation factor activity (molecular function) GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function) GO:1990841 - promoter-specific chromatin binding (molecular function)
InterPro domains	IPR003923 - Transcription initiation factor TFIID, 23-30kDa subunit

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6598532.1 Transcription initiation factor TFIID subunit 10, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-67

99.26

Show/hide

Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_004138687.1 transcription initiation factor TFIID subunit 10 [Cucumis sativus]

6.1e-67

98.53

Show/hide

Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_008445293.1 PREDICTED: transcription initiation factor TFIID subunit 10 isoform X1 [Cucumis melo]

1.2e-67

100

Show/hide

Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_022962589.1 transcription initiation factor TFIID subunit 10 [Cucurbita moschata]

2.7e-67

99.26

Show/hide

Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_038886703.1 transcription initiation factor TFIID subunit 10 isoform X1 [Benincasa hispida]

1.2e-67

100

Show/hide

Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPV6 Transcription initiation factor TFIID subunit 10

2.9e-67

98.53

Show/hide

Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH+QQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A1S3BD75 Transcription initiation factor TFIID subunit 10

5.9e-68

100

Show/hide

Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A6J1BVJ5 Transcription initiation factor TFIID subunit 10

4.7e-65

95.59

Show/hide

Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQ T  RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A6J1HHI7 Transcription initiation factor TFIID subunit 10

1.3e-67

99.26

Show/hide

Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A6J1KB50 Transcription initiation factor TFIID subunit 10

1.3e-67

99.26

Show/hide

Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

SwissProt top hits

e value

%identity

Alignment

O04173 Transcription initiation factor TFIID subunit 10

5.4e-58

83.82

Show/hide

Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH QQ+  ++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MEDLSKALREYGVNVKH EYFADSPSTG+D  +R+E
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

Q12962 Transcription initiation factor TFIID subunit 10

4.3e-23

Show/hide

Query:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKH
        L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK +  A    +   + KD++  LTMEDL+ AL EYG+NVK 
Subjt:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKH

Query:  QEYF
          YF
Subjt:  QEYF

Q8K0H5 Transcription initiation factor TFIID subunit 10

4.3e-23

Show/hide

Query:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKH
        L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK +  A    +   + KD++  LTMEDL+ AL EYG+NVK 
Subjt:  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKH

Query:  QEYF
          YF
Subjt:  QEYF

Q9U5W9 Transcription initiation factor TFIID subunit 10

4.1e-18

39.47

Show/hide

Query:  DDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAV------VKDKRDKQQKDKRLILTMEDLSKA
        +++ + E +  L +Y+PTIPD L  H L  +GF   D +++RLV+V+ QKF++D+A+DALQHCK R   +         K  K  KD++  L MEDL  A
Subjt:  DDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAV------VKDKRDKQQKDKRLILTMEDLSKA

Query:  LREYGVNVKHQEYF
        L ++G+ ++  +YF
Subjt:  LREYGVNVKHQEYF

Q9XZT7 Transcription initiation factor TFIID subunit 10b

5.8e-20

40.48

Show/hide

Query:  NHSQQATG------SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR-QAAVVKDKRDKQQKD
        +H Q + G       R    + LS+F++ L +YTP IPD +  HYL   GFQ  D R++RL+++A QK+++D+  DALQH KAR            + KD
Subjt:  NHSQQATG------SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR-QAAVVKDKRDKQQKD

Query:  KRLILTMEDLSKALREYGVNVKHQEY
        ++  LTMEDL  AL +YG+NV+  +Y
Subjt:  KRLILTMEDLSKALREYGVNVKHQEY

Arabidopsis top hits

e value

%identity

Alignment

AT4G31720.1 TBP-associated factor II 15

3.8e-59

83.82

Show/hide

Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH QQ+  ++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MEDLSKALREYGVNVKH EYFADSPSTG+D  +R+E
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

AT4G31720.2 TBP-associated factor II 15

3.8e-59

83.82

Show/hide

Query:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT
        MNH QQ+  ++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LT
Subjt:  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MEDLSKALREYGVNVKH EYFADSPSTG+D  +R+E
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAACCATAGCCAACAAGCGACAGGGAGCAGGCACGACGATGACGCAGCGCTATCTGAGTTTTTAGCTTCTCTAATGGAGTATACTCCCACTATTCCCGATGAGTTGGT
GGAGCATTACTTAGGAAAGAGTGGATTTCAGTGTCCCGACGTTCGATTGATCAGGCTTGTCGCTGTTGCCACACAGAAGTTCGTTGCGGATGTTGCAAGTGATGCTCTCC
AGCATTGTAAGGCAAGGCAGGCTGCAGTGGTGAAAGACAAAAGGGATAAACAACAAAAGGATAAGCGGTTAATATTGACCATGGAGGATCTCTCAAAGGCACTTCGTGAG
TATGGCGTCAATGTGAAACATCAAGAATATTTTGCTGATAGCCCTTCAACGGGAGTGGATTCTACTTCCAGAGAGGAATGA

mRNA sequence

Show/hide mRNA sequence

ACGGGCATTACCCTTCAAACGAGCTTGATTTCGAAGAGAGGGAAAAATCTAACGAAGGAGAAGACGAGGAAGAAGAAGAAGAAGAAGAAAAGGAAGAGGAAGATGAACCA
TAGCCAACAAGCGACAGGGAGCAGGCACGACGATGACGCAGCGCTATCTGAGTTTTTAGCTTCTCTAATGGAGTATACTCCCACTATTCCCGATGAGTTGGTGGAGCATT
ACTTAGGAAAGAGTGGATTTCAGTGTCCCGACGTTCGATTGATCAGGCTTGTCGCTGTTGCCACACAGAAGTTCGTTGCGGATGTTGCAAGTGATGCTCTCCAGCATTGT
AAGGCAAGGCAGGCTGCAGTGGTGAAAGACAAAAGGGATAAACAACAAAAGGATAAGCGGTTAATATTGACCATGGAGGATCTCTCAAAGGCACTTCGTGAGTATGGCGT
CAATGTGAAACATCAAGAATATTTTGCTGATAGCCCTTCAACGGGAGTGGATTCTACTTCCAGAGAGGAATGAGTTGGAATAACGGTTAAAATGTCTCATCGTTATTTAT
GTCGTGAATATACTGAATTACTGATGGATAGCGTTCAGGGTTGGAGTATTTCTGGCTGACTCTGCAGCTAAATTTAGTCCCTGCCATGTGCAGTCATCATGAGTCATGTT
GTACATTATAGCATTGCTTTGAACATCAAAATTAAGTAGCTGTGTTTCCTTAGTCATATTCTATTACTACTTTCCATAGCAAAGGCCTTAACCTTTTCGAACTGTCAAAG
CGGTAGATATGTTCGGCATTTTCTACTTGTCTATTGAATGAGACTGTGCATAATGAAAATCATAACATCATTCTTGTTCATACAAGGTCGTGTATGGATGGTTGATCCAC
ATCTGTCAGTGACCAGAATGCATTTTCTGTAGATTTCGACTTCAATTTATTTTTATTTGTTCCTGAC

Protein sequence

Show/hide protein sequence

MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALRE
YGVNVKHQEYFADSPSTGVDSTSREE

Pay0012976 (gene) of Melon (Payzawat) v1 genome