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Pay0013145 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0013145
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr10:14289512..14290280
RNA-Seq ExpressionPay0013145
SyntenyPay0013145
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050251.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.8e-6181.01Show/hide
Query:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR
        MGLRPEYES R ALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLA+TYSPPGASSTFCKNCKL                   GHILDNCPIKPPR
Subjt:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR

Query:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGS
        P+SYS RAKNFTKP+NSSV+AAT DNPTTPQFQISDLQSLLN LISSSSSALAVS G+
Subjt:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGS
KAA0058547.1 Zinc finger, CCHC-type [Cucumis melo var. makuwa]4.1e-6780.11Show/hide
Query:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR
        MGLRPEYESVRAALLHR+PLPSLDA IQEILFEEKRLGINLSKHSDVVLA+TYSP GASSTFCKN KL                   GHILDNCPIKPPR
Subjt:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR

Query:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGSGFADGTDDWDGSQSGKIV
        P+SY  RAKNFTKP+NSSV+AAT DN TTPQFQISDLQSLLN LISSSSSALAVS GSG  DGTDDWDGSQSGKIV
Subjt:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGSGFADGTDDWDGSQSGKIV
KAA0067102.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.0e-6586.71Show/hide
Query:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR
        MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI                  GHILDNCPIKPPR
Subjt:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR

Query:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGS
        PQSYSARAKNFTKP+NSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSP +
Subjt:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGS
TYJ98155.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.8e-6181.01Show/hide
Query:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR
        MGLRPEYES R ALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLA+TYSPPGASSTFCKNCKL                   GHILDNCPIKPPR
Subjt:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR

Query:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGS
        P+SYS RAKNFTKP+NSSV+AAT DNPTTPQFQISDLQSLLN LISSSSSALAVS G+
Subjt:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGS
XP_016903357.1 PREDICTED: uncharacterized protein LOC107992140 [Cucumis melo]2.6e-7788.64Show/hide
Query:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR
        MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI                  GHILDNCPIKPPR
Subjt:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR

Query:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGSGFADGTDDWDGSQSGKIV
        PQSYSARAKNFTKP+NSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSP SGFADGTDDWDGSQSGKIV
Subjt:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGSGFADGTDDWDGSQSGKIV
TrEMBL top hitse value%identityAlignment
A0A1S4E559 uncharacterized protein LOC1079921401.3e-7788.64Show/hide
Query:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR
        MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI                  GHILDNCPIKPPR
Subjt:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR

Query:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGSGFADGTDDWDGSQSGKIV
        PQSYSARAKNFTKP+NSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSP SGFADGTDDWDGSQSGKIV
Subjt:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGSGFADGTDDWDGSQSGKIV
A0A5A7U9P9 Retrovirus-related Pol polyprotein from transposon TNT 1-942.8e-6181.01Show/hide
Query:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR
        MGLRPEYES R ALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLA+TYSPPGASSTFCKNCKL                   GHILDNCPIKPPR
Subjt:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR

Query:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGS
        P+SYS RAKNFTKP+NSSV+AAT DNPTTPQFQISDLQSLLN LISSSSSALAVS G+
Subjt:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGS
A0A5A7UUZ4 Zinc finger, CCHC-type2.0e-6780.11Show/hide
Query:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR
        MGLRPEYESVRAALLHR+PLPSLDA IQEILFEEKRLGINLSKHSDVVLA+TYSP GASSTFCKN KL                   GHILDNCPIKPPR
Subjt:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR

Query:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGSGFADGTDDWDGSQSGKIV
        P+SY  RAKNFTKP+NSSV+AAT DN TTPQFQISDLQSLLN LISSSSSALAVS GSG  DGTDDWDGSQSGKIV
Subjt:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGSGFADGTDDWDGSQSGKIV
A0A5A7VFE6 Retrovirus-related Pol polyprotein from transposon TNT 1-944.9e-6686.71Show/hide
Query:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR
        MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI                  GHILDNCPIKPPR
Subjt:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR

Query:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGS
        PQSYSARAKNFTKP+NSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSP +
Subjt:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGS
A0A5D3BI36 Retrovirus-related Pol polyprotein from transposon TNT 1-942.8e-6181.01Show/hide
Query:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR
        MGLRPEYES R ALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLA+TYSPPGASSTFCKNCKL                   GHILDNCPIKPPR
Subjt:  MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLI------------------GHILDNCPIKPPR

Query:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGS
        P+SYS RAKNFTKP+NSSV+AAT DNPTTPQFQISDLQSLLN LISSSSSALAVS G+
Subjt:  PQSYSARAKNFTKPKNSSVIAATSDNPTTPQFQISDLQSLLNLLISSSSSALAVSPGS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTTCGTCCAGAATATGAATCTGTTAGGGCTGCCTTGTTACACCGCAGTCCCTTGCCCTCATTGGATGCTGCTATTCAAGAAATATTATTTGAAGAAAAACGTCT
TGGCATCAATCTCTCTAAACATTCTGATGTTGTTCTTGCCAACACTTATTCACCACCTGGAGCATCAAGCACATTTTGTAAGAATTGTAAGCTCATTGGTCATATTCTGG
ATAATTGTCCCATAAAACCACCTCGACCTCAAAGCTATTCTGCAAGAGCAAAGAACTTCACTAAACCCAAGAACTCCTCTGTTATTGCTGCTACTTCAGATAATCCTACC
ACCCCCCAGTTTCAGATAAGTGATCTCCAAAGTTTGCTAAATCTGTTAATTTCATCATCTTCCTCTGCACTTGCCGTCTCACCAGGTTCAGGATTCGCAGACGGGACAGA
CGATTGGGACGGGTCGCAAAGTGGGAAGATTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTTCGTCCAGAATATGAATCTGTTAGGGCTGCCTTGTTACACCGCAGTCCCTTGCCCTCATTGGATGCTGCTATTCAAGAAATATTATTTGAAGAAAAACGTCT
TGGCATCAATCTCTCTAAACATTCTGATGTTGTTCTTGCCAACACTTATTCACCACCTGGAGCATCAAGCACATTTTGTAAGAATTGTAAGCTCATTGGTCATATTCTGG
ATAATTGTCCCATAAAACCACCTCGACCTCAAAGCTATTCTGCAAGAGCAAAGAACTTCACTAAACCCAAGAACTCCTCTGTTATTGCTGCTACTTCAGATAATCCTACC
ACCCCCCAGTTTCAGATAAGTGATCTCCAAAGTTTGCTAAATCTGTTAATTTCATCATCTTCCTCTGCACTTGCCGTCTCACCAGGTTCAGGATTCGCAGACGGGACAGA
CGATTGGGACGGGTCGCAAAGTGGGAAGATTGTTTGA
Protein sequenceShow/hide protein sequence
MGLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKRLGINLSKHSDVVLANTYSPPGASSTFCKNCKLIGHILDNCPIKPPRPQSYSARAKNFTKPKNSSVIAATSDNPT
TPQFQISDLQSLLNLLISSSSSALAVSPGSGFADGTDDWDGSQSGKIV