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Pay0013158 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0013158
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPol protein
Genome locationchr01:6703835..6708397
RNA-Seq ExpressionPay0013158
SyntenyPay0013158
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032439.1 pol protein [Cucumis melo var. makuwa]7.3e-8297.48Show/hide
Query:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI
        A SRQKSYADVRRKDLEFEVGDKVFLKVAP+RGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPL+I
Subjt:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI

Query:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE
        DENLSY EQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE
Subjt:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE

KAA0053367.1 pol protein [Cucumis melo var. makuwa]9.6e-8298.74Show/hide
Query:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI
        A SRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI
Subjt:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI

Query:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE
        DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLW NHRVEEATWEREDDMRSRYPELFEE
Subjt:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE

KAA0056702.1 pol protein [Cucumis melo var. makuwa]2.1e-8198.11Show/hide
Query:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI
        A SRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI
Subjt:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI

Query:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE
        DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLW NHRVEEATWEREDDMRSRYP+LFEE
Subjt:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE

KAA0059807.1 pol protein [Cucumis melo var. makuwa]2.8e-8198.11Show/hide
Query:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI
        A SRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI
Subjt:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI

Query:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE
        DENLSYTEQPVEVL REVKTLRNKEIPLVKVLW NHRVEEATWEREDDMRSRYPELFEE
Subjt:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE

XP_016900398.1 PREDICTED: uncharacterized protein LOC107990886 [Cucumis melo]2.6e-8786.15Show/hide
Query:  MPLRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL
        MP RRG  RG +GGRGRG GR    VQPVAQATD AAPSRQKSYADVRR+DLEF+VGDKVFLKVAPM+GVLRFERRGKLSPRFVGPF+ILE+IG VAYRL
Subjt:  MPLRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL

Query:  ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE
         LPPSLS VHDVFHVSMLRKYVP+PSHVVDY+PLEIDENLSYTEQPVEVLAREVK LR KEIPLVKVLWWNH+VEEATWEREDDM++ YPELFEE
Subjt:  ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE

TrEMBL top hitse value%identityAlignment
A0A1S4DWP6 uncharacterized protein LOC1079908861.3e-8786.15Show/hide
Query:  MPLRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL
        MP RRG  RG +GGRGRG GR    VQPVAQATD AAPSRQKSYADVRR+DLEF+VGDKVFLKVAPM+GVLRFERRGKLSPRFVGPF+ILE+IG VAYRL
Subjt:  MPLRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRL

Query:  ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE
         LPPSLS VHDVFHVSMLRKYVP+PSHVVDY+PLEIDENLSYTEQPVEVLAREVK LR KEIPLVKVLWWNH+VEEATWEREDDM++ YPELFEE
Subjt:  ALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE

A0A5A7ST70 Pol protein3.6e-8297.48Show/hide
Query:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI
        A SRQKSYADVRRKDLEFEVGDKVFLKVAP+RGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPL+I
Subjt:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI

Query:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE
        DENLSY EQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE
Subjt:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE

A0A5A7UFU0 Pol protein4.6e-8298.74Show/hide
Query:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI
        A SRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI
Subjt:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI

Query:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE
        DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLW NHRVEEATWEREDDMRSRYPELFEE
Subjt:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE

A0A5A7ULI8 Pol protein1.0e-8198.11Show/hide
Query:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI
        A SRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI
Subjt:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI

Query:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE
        DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLW NHRVEEATWEREDDMRSRYP+LFEE
Subjt:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE

A0A5A7UYS8 Pol protein1.3e-8198.11Show/hide
Query:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI
        A SRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI
Subjt:  APSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEI

Query:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE
        DENLSYTEQPVEVL REVKTLRNKEIPLVKVLW NHRVEEATWEREDDMRSRYPELFEE
Subjt:  DENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.3e-0639.29Show/hide
Query:  RQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
        + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  RQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT35 Transposon Tf2-2 polyprotein2.3e-0639.29Show/hide
Query:  RQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
        + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  RQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT36 Transposon Tf2-3 polyprotein2.3e-0639.29Show/hide
Query:  RQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
        + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  RQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

P0CT41 Transposon Tf2-12 polyprotein2.3e-0639.29Show/hide
Query:  RQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
        + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  RQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

Q9UR07 Transposon Tf2-11 polyprotein2.3e-0639.29Show/hide
Query:  RQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY
        + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  RQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCTAAGGAGGGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGTGTTCAACCTGAGGTGCAGCCTGTAGCCCAAGCCACTGACCCGGCTGC
GCCAAGTAGGCAGAAGAGTTATGCAGATGTGAGACGGAAGGATCTTGAGTTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTG
AAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCAT
GATGTGTTTCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATACTGAACAACCCGT
TGAGGTGCTGGCTAGAGAGGTGAAAACGTTGAGGAATAAAGAAATCCCTTTGGTTAAAGTCTTATGGTGGAATCACCGTGTGGAAGAGGCTACATGGGAGCGAGAAGATG
ACATGAGGTCCCGTTATCCCGAACTGTTCGAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCTAAGGAGGGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGTGTTCAACCTGAGGTGCAGCCTGTAGCCCAAGCCACTGACCCGGCTGC
GCCAAGTAGGCAGAAGAGTTATGCAGATGTGAGACGGAAGGATCTTGAGTTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTG
AAAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCAT
GATGTGTTTCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATACTGAACAACCCGT
TGAGGTGCTGGCTAGAGAGGTGAAAACGTTGAGGAATAAAGAAATCCCTTTGGTTAAAGTCTTATGGTGGAATCACCGTGTGGAAGAGGCTACATGGGAGCGAGAAGATG
ACATGAGGTCCCGTTATCCCGAACTGTTCGAGGAATAA
Protein sequenceShow/hide protein sequence
MPLRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVH
DVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKTLRNKEIPLVKVLWWNHRVEEATWEREDDMRSRYPELFEE