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Pay0013197 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0013197
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionNeurochondrin isoform X1
Genome locationchr06:16419156..16422275
RNA-Seq ExpressionPay0013197
SyntenyPay0013197
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037285.1 neurochondrin isoform X4 [Cucumis melo var. makuwa]2.3e-43100Show/hide
Query:  VVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVVKIGSAVGGNYFSS
        VVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVVKIGSAVGGNYFSS
Subjt:  VVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVVKIGSAVGGNYFSS
TYK05898.1 neurochondrin isoform X1 [Cucumis melo var. makuwa]1.6e-3664.18Show/hide
Query:  VVKCLINLIHKHGGWIDNDGSIFLACDTILNASE------------------------------------------------GLQKKCIYKSRFAMHECY
        VVKCLINLIHKHGGWIDNDGSIFLACDTILNASE                                                GLQKKCIYKSRFAMHECY
Subjt:  VVKCLINLIHKHGGWIDNDGSIFLACDTILNASE------------------------------------------------GLQKKCIYKSRFAMHECY

Query:  TKHGKEVESCLPSYANINNVVKIGSAVGGNYFSS
        TKHGKEVESCLPSYANINNVVKIGSAVGGNYFSS
Subjt:  TKHGKEVESCLPSYANINNVVKIGSAVGGNYFSS
XP_008465395.1 PREDICTED: uncharacterized protein LOC103503025 isoform X1 [Cucumis melo]3.5e-60100Show/hide
Query:  MFTFMETLHPHTFSTTVMSWKADMKKEVVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVV
        MFTFMETLHPHTFSTTVMSWKADMKKEVVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVV
Subjt:  MFTFMETLHPHTFSTTVMSWKADMKKEVVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVV

Query:  KIGSAVGGNYFSS
        KIGSAVGGNYFSS
Subjt:  KIGSAVGGNYFSS
XP_008465396.1 PREDICTED: uncharacterized protein LOC103503025 isoform X2 [Cucumis melo]2.6e-4785.84Show/hide
Query:  MFTFMETLHPHTFSTTVMSWKADMKKEVVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVV
        MFTFMETLHPHTFSTTVMSWKADMKKEVVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKE               
Subjt:  MFTFMETLHPHTFSTTVMSWKADMKKEVVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVV

Query:  KIGSAVGGNYFSS
         IGSAVGGNYFSS
Subjt:  KIGSAVGGNYFSS
XP_022935920.1 uncharacterized protein LOC111442684 isoform X1 [Cucurbita moschata]3.7e-0996.77Show/hide
Query:  VVKCLINLIHKHGGWIDNDGSIFLACDTILN
        VVKCLINLIHKHGGW+DNDGSIFLACDTILN
Subjt:  VVKCLINLIHKHGGWIDNDGSIFLACDTILN
TrEMBL top hitse value%identityAlignment
A0A1S3CNT1 uncharacterized protein LOC103503025 isoform X21.3e-4785.84Show/hide
Query:  MFTFMETLHPHTFSTTVMSWKADMKKEVVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVV
        MFTFMETLHPHTFSTTVMSWKADMKKEVVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKE               
Subjt:  MFTFMETLHPHTFSTTVMSWKADMKKEVVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVV

Query:  KIGSAVGGNYFSS
         IGSAVGGNYFSS
Subjt:  KIGSAVGGNYFSS
A0A1S3CQA2 uncharacterized protein LOC103503025 isoform X11.7e-60100Show/hide
Query:  MFTFMETLHPHTFSTTVMSWKADMKKEVVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVV
        MFTFMETLHPHTFSTTVMSWKADMKKEVVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVV
Subjt:  MFTFMETLHPHTFSTTVMSWKADMKKEVVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVV

Query:  KIGSAVGGNYFSS
        KIGSAVGGNYFSS
Subjt:  KIGSAVGGNYFSS
A0A5A7T743 Neurochondrin isoform X41.1e-43100Show/hide
Query:  VVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVVKIGSAVGGNYFSS
        VVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVVKIGSAVGGNYFSS
Subjt:  VVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVVKIGSAVGGNYFSS
A0A5D3C3W9 Neurochondrin isoform X17.7e-3764.18Show/hide
Query:  VVKCLINLIHKHGGWIDNDGSIFLACDTILNASE------------------------------------------------GLQKKCIYKSRFAMHECY
        VVKCLINLIHKHGGWIDNDGSIFLACDTILNASE                                                GLQKKCIYKSRFAMHECY
Subjt:  VVKCLINLIHKHGGWIDNDGSIFLACDTILNASE------------------------------------------------GLQKKCIYKSRFAMHECY

Query:  TKHGKEVESCLPSYANINNVVKIGSAVGGNYFSS
        TKHGKEVESCLPSYANINNVVKIGSAVGGNYFSS
Subjt:  TKHGKEVESCLPSYANINNVVKIGSAVGGNYFSS
A0A6J1IL84 neurochondrin homolog isoform X11.8e-0996.77Show/hide
Query:  VVKCLINLIHKHGGWIDNDGSIFLACDTILN
        VVKCLINLIHKHGGW+DNDGSIFLACDTILN
Subjt:  VVKCLINLIHKHGGWIDNDGSIFLACDTILN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G32050.1 neurochondrin family protein4.5e-0564.52Show/hide
Query:  VVKCLINLIHKHGGWIDNDGSIFLACDTILN
        VV+CLI LI + G  +D D SIFLACDTI+N
Subjt:  VVKCLINLIHKHGGWIDNDGSIFLACDTILN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCACGTTCATGGAGACGCTCCACCCACATACATTCTCCACGACTGTAATGTCATGGAAGGCCGATATGAAGAAAGAAGTTGTAAAATGCCTTATAAATTTGATTCA
CAAGCACGGTGGCTGGATTGACAATGATGGATCCATCTTCTTGGCTTGTGATACAATCTTGAATGCTTCTGAAGGATTACAAAAGAAATGCATATACAAAAGCAGATTTG
CAATGCATGAATGCTATACAAAGCATGGAAAAGAGGTTGAGAGTTGCTTGCCTTCTTATGCAAATATCAATAATGTTGTGAAGATTGGCTCTGCTGTTGGTGGTAATTAT
TTTAGCTCATGA
mRNA sequenceShow/hide mRNA sequence
TTTTTTCCCCCCAACTATCCATTTGTTTCCATATCTCTAAAAAGAACCTATCTATTTTCTCCCAGAAGTTTTCACTCTTCCCTGATTTTCTCCGATTTGAACGCTCCCCT
TCTCGACCACAATTGTGTGAACAATCCCTTAAGACGGCCCGTCACCGAACGATCTCGCACCATGGACGTTCCACCGCGCACGGATGTTCACGTTCATGGAGACGCTCCAC
CCACATACATTCTCCACGACTGTAATGTCATGGAAGGCCGATATGAAGAAAGAAGTTGTAAAATGCCTTATAAATTTGATTCACAAGCACGGTGGCTGGATTGACAATGA
TGGATCCATCTTCTTGGCTTGTGATACAATCTTGAATGCTTCTGAAGGATTACAAAAGAAATGCATATACAAAAGCAGATTTGCAATGCATGAATGCTATACAAAGCATG
GAAAAGAGGTTGAGAGTTGCTTGCCTTCTTATGCAAATATCAATAATGTTGTGAAGATTGGCTCTGCTGTTGGTGGTAATTATTTTAGCTCATGAATTGAAGATAGAGGA
TGCGAATGCAAGTTTATTTGATGCCAAATTTCATCCAAAGTTATTGAATTTCAAGCTTCTTTAGTCAAGTTTGTATTTCTTGAACTAGAATTGTAGTCTTATGATTTTTG
GAACAACATAGTTGGATCATTTTTGTAATTTTGGAATTATCATATTAGGTTGGGTAGATACAAGTACTGTTTTGTATATGACAATATCG
Protein sequenceShow/hide protein sequence
MFTFMETLHPHTFSTTVMSWKADMKKEVVKCLINLIHKHGGWIDNDGSIFLACDTILNASEGLQKKCIYKSRFAMHECYTKHGKEVESCLPSYANINNVVKIGSAVGGNY
FSS