CuGenDBv2

Gene ID	Pay0013207
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrotransposon protein
Genome location	chr09:5675901..5676577
RNA-Seq Expression	Pay0013207
Synteny	Pay0013207
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0043030.1 retrotransposon protein [Cucumis melo var. makuwa]

7.5e-77

74.63

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Query:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ
        M Q QMLLMLEALMNDNKRLPQTPY+TRHRIRQLAYF+MIH+S LVCR+ TR+DRRT  ILC+LL+ V+GLS  EIVDVEEMVAMFL+VL H+VKNR+IQ
Subjt:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ

Query:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV
        ++FVRSGET S HFN+V+F VVRLY+E+IK+   +TNNC DQ WK FE      NCLGA LD TYIKVNVPA DRPTFRT KG+IA NVLGVCDTKGD V
Subjt:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV

Query:  YVLAG
        Y+LAG
Subjt:  YVLAG

KAA0058874.1 retrotransposon protein [Cucumis melo var. makuwa]

2.4e-75

74.38

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Query:  QCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQQK
        Q Q+LL LE LMN+NKRLP TP +TRHRIR+LAYF+MIH+S LVCR+ TR+DRRT  ILC+LL+ VAGLS  EIVDVEEMVAMFL+VL H+VKNR+IQ++
Subjt:  QCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQQK

Query:  FVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFVYV
        FVRSGET S HFN+V+ AV+RLY+E+IK+PV VT+NC DQ WK FE      NCLGA LD TYIKVNVPA DRPTFRTRKGEI TNVLGVCDTKGDFVYV
Subjt:  FVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFVYV

Query:  LAG
        LAG
Subjt:  LAG

KAA0066018.1 retrotransposon protein [Cucumis melo var. makuwa]

6.5e-105

95.61

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Query:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ
        MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRR LIILCNLLK VAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ
Subjt:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ

Query:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV
        QKFVRSGETDSGHFNLVVFAVVRLYDE+IKKPVLVTNNCTDQHWKYFE      NCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV
Subjt:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV

Query:  YVLAG
        YVLAG
Subjt:  YVLAG

TYK05825.1 retrotransposon protein [Cucumis melo var. makuwa]

6.5e-105

95.61

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Query:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ
        MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRR LIILCNLLK VAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ
Subjt:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ

Query:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV
        QKFVRSGETDSGHFNLVVFAVVRLYDE+IKKPVLVTNNCTDQHWKYFE      NCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV
Subjt:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV

Query:  YVLAG
        YVLAG
Subjt:  YVLAG

XP_008463581.1 PREDICTED: uncharacterized protein LOC103501690 [Cucumis melo]

9.3e-112

100

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Query:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ
        MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ
Subjt:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ

Query:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV
        QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV
Subjt:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV

Query:  YVLAG
        YVLAG
Subjt:  YVLAG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CL59 uncharacterized protein LOC103501690

4.5e-112

100

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Query:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ
        MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ
Subjt:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ

Query:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV
        QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV
Subjt:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV

Query:  YVLAG
        YVLAG
Subjt:  YVLAG

A0A5A7TI78 Retrotransposon protein

3.6e-77

74.63

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Query:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ
        M Q QMLLMLEALMNDNKRLPQTPY+TRHRIRQLAYF+MIH+S LVCR+ TR+DRRT  ILC+LL+ V+GLS  EIVDVEEMVAMFL+VL H+VKNR+IQ
Subjt:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ

Query:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV
        ++FVRSGET S HFN+V+F VVRLY+E+IK+   +TNNC DQ WK FE      NCLGA LD TYIKVNVPA DRPTFRT KG+IA NVLGVCDTKGD V
Subjt:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV

Query:  YVLAG
        Y+LAG
Subjt:  YVLAG

A0A5A7UUT3 Retrotransposon protein

1.2e-75

74.38

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Query:  QCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQQK
        Q Q+LL LE LMN+NKRLP TP +TRHRIR+LAYF+MIH+S LVCR+ TR+DRRT  ILC+LL+ VAGLS  EIVDVEEMVAMFL+VL H+VKNR+IQ++
Subjt:  QCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQQK

Query:  FVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFVYV
        FVRSGET S HFN+V+ AV+RLY+E+IK+PV VT+NC DQ WK FE      NCLGA LD TYIKVNVPA DRPTFRTRKGEI TNVLGVCDTKGDFVYV
Subjt:  FVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFVYV

Query:  LAG
        LAG
Subjt:  LAG

A0A5A7VE90 Retrotransposon protein

3.1e-105

95.61

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Query:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ
        MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRR LIILCNLLK VAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ
Subjt:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ

Query:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV
        QKFVRSGETDSGHFNLVVFAVVRLYDE+IKKPVLVTNNCTDQHWKYFE      NCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV
Subjt:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV

Query:  YVLAG
        YVLAG
Subjt:  YVLAG

A0A5D3C368 Retrotransposon protein

3.1e-105

95.61

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Query:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ
        MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRR LIILCNLLK VAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ
Subjt:  MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQ

Query:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV
        QKFVRSGETDSGHFNLVVFAVVRLYDE+IKKPVLVTNNCTDQHWKYFE      NCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV
Subjt:  QKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFV

Query:  YVLAG
        YVLAG
Subjt:  YVLAG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G28950.1 unknown protein

1.6e-05

43.14

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Query:  NCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAG
        +C+GA +D T+I   V     P+FR RKG+I+ N+L  C+   +F+YVL+G
Subjt:  NCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAG

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)

1.6e-13

29.59

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Query:  FQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQQKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVT
        +Q+++  +  C E  R+D+     LC+LL+    L     + +E  +A+FL+++ HN++ R +Q+ F  SGET S HFN V+ AV+ +  +  +      
Subjt:  FQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQQKFVRSGETDSGHFNLVVFAVVRLYDEMIKKPVLVT

Query:  NNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAG
        ++  +    YF+      +C+G ++D  +I V V   ++  FR   G +  NVL        F YVLAG
Subjt:  NNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAG

Sequences

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CDS sequence

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ATGACCCAATGTCAGATGCTCCTAATGTTGGAGGCACTAATGAACGACAATAAGCGTCTCCCACAGACACCCTACAATACAAGGCATAGAATTAGGCAGCTTGCGTACTT
TCAGATGATACACAAGTCCCATCTTGTGTGTCGTGAAATCACCCGCATTGACAGGCGAACATTAATAATTCTATGCAATTTACTTAAGATTGTAGCTGGTCTTTCGTGGA
TAGAGATTGTCGATGTTGAGGAAATGGTTGCGATGTTCTTGTACGTCCTTGTGCATAACGTGAAGAACCGCATAATTCAACAGAAATTTGTACGATCTGGAGAGACAGAC
TCAGGACATTTTAACCTCGTCGTGTTTGCTGTGGTACGACTATACGACGAGATGATAAAGAAACCTGTCCTAGTAACAAACAACTGCACTGATCAACATTGGAAGTATTT
TGAGGTGGGCGTAGTACATGTGAATTGCCTTGGGGCATTATTGGACGTGACGTACATAAAAGTGAACGTGCCAGCAACAGATCGCCCTACGTTTAGAACGCGGAAGGGAG
AAATTGCAACTAATGTACTCGGCGTTTGCGACACCAAAGGGGACTTCGTATATGTCCTCGCCGGTTGA

mRNA sequence

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Protein sequence

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MTQCQMLLMLEALMNDNKRLPQTPYNTRHRIRQLAYFQMIHKSHLVCREITRIDRRTLIILCNLLKIVAGLSWIEIVDVEEMVAMFLYVLVHNVKNRIIQQKFVRSGETD
SGHFNLVVFAVVRLYDEMIKKPVLVTNNCTDQHWKYFEVGVVHVNCLGALLDVTYIKVNVPATDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAG

Pay0013207 (gene) of Melon (Payzawat) v1 genome