; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0013503 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0013503
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRNA-binding protein 42-like
Genome locationchr05:21716659..21735611
RNA-Seq ExpressionPay0013503
SyntenyPay0013503
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0003729 - mRNA binding (molecular function)
GO:0017069 - snRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034215 - RBM42, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029895.1 RNA-binding protein 42 [Cucurbita argyrosperma subsp. argyrosperma]6.0e-10987.4Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPS+ SSSS SQFTYSNGSYFPLPFHLQQ+APAPA PQYPSPYVA PGPP VPLPV  VYPAPA  PA YTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK
         ALKEMN +         R   W KERTDY+AL RHKNHTQKKSKLPKKS +HK
Subjt:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK

XP_004152823.1 RNA-binding protein 42 [Cucumis sativus]4.9e-11992.91Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQY SPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK
        GALKEMN +         R   W KERTDYEALGRHKNHTQKKSKLPKKS +HK
Subjt:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK

XP_016899517.1 PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 42 [Cucumis melo]5.8e-12093.31Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK
        GALKEMN +         R   W KERTDYEALGRHKNHTQKKSKLPKKS +HK
Subjt:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK

XP_023545858.1 RNA-binding protein 42-like [Cucurbita pepo subsp. pepo]2.7e-10987.8Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPS+ SSSS SQFTYSNGSYFPLPFHLQQSAPAPA PQYPSPYVA PGPP VPLPV  VYPAPA  PA YTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK
         ALKEMN +         R   W KERTDY+AL RHKNHTQKKSKLPKKS +HK
Subjt:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK

XP_038890923.1 RNA-binding protein 42-like [Benincasa hispida]2.3e-11389.76Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPS+ SSSS SQFTYSNGSYFPLPFHLQQSAPA A PQYPSPYVAPPGPP VPLPVA VYP PAP PAVYTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK
        GALKEMN +         R   W KERTDYEALGRHKNHTQKKSKLPKKS +HK
Subjt:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK

TrEMBL top hitse value%identityAlignment
A0A0A0LH39 RRM domain-containing protein2.4e-11992.91Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQY SPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK
        GALKEMN +         R   W KERTDYEALGRHKNHTQKKSKLPKKS +HK
Subjt:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK

A0A1S4DU47 LOW QUALITY PROTEIN: RNA-binding protein 422.8e-12093.31Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK
        GALKEMN +         R   W KERTDYEALGRHKNHTQKKSKLPKKS +HK
Subjt:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK

A0A6J1ET57 RNA-binding protein 42-like3.8e-10987.4Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSS PS+ SSSS SQFTYSNGSYFPLPFHLQQSAPAPA PQYPSPYVA PGPP VPLPV  VYPAPA  PA YTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK
         ALKEMN +         R   W KERTDY+AL RHKNHTQKKSKLPKKS +HK
Subjt:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK

A0A6J1FBP0 RNA-binding protein 42-like1.4e-10886.22Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGP SAPS+ASSSS +QFTYSNGSYFPLPFHLQQSAPA   PQYP+PYVA P PP VPLPVA VYP PAP PA Y LPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTL EWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK
        GALKEMN +         R   W KERTDYEALGR+KNHTQKKSKLPKKS +HK
Subjt:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK

A0A6J1KCL6 RNA-binding protein 42-like1.1e-10887.4Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPS+ SSSS SQFTYSNGSYFPLPFHLQQSA APA PQYPSPYVA PGPP VPLPV  VYPAPA  PA YTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK
         ALKEMN +         R   W KERTDY+AL RHKNHTQKKSKLPKKS +HK
Subjt:  GALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK

SwissProt top hitse value%identityAlignment
A2VDB3 RNA-binding protein 428.3e-2941.78Show/hide
Query:  PLPFHLQQSAPAPAPPQYPSPYVA-PPGPPPVPLPVAPVYPAP----AP---PPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSE--------
        PL  H     P P     P P +   PGPPP P+   P  P P    AP   P  +   P    A  + + + + + P  +   K +L+  E        
Subjt:  PLPFHLQQSAPAPAPPQYPSPYVA-PPGPPPVPLPVAPVYPAP----AP---PPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSE--------

Query:  ----------IEHKAETKKKAIPRK-------AAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFS
                  +E   E KKKA P K       AAG SWED +L EW  +D+R+FCGDLGNEVNDD+L++AFSR+PSF  A+V+RDKRTGKTKGYGFVSF 
Subjt:  ----------IEHKAETKKKAIPRK-------AAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFS

Query:  NPTDLAGALKEMN
        +P D   A +EMN
Subjt:  NPTDLAGALKEMN

Q66KL9 RNA-binding protein 429.2e-2839.26Show/hide
Query:  PFHLQQSAPAPAPPQYPSPYVAPPGP-PPVPLPVAPVYPAPAP-----PPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSE------------
        P  L +  P P       P  AP GP PP P PV P  P   P      P VYT P  ++ ++      + + P  L   K  L+  E            
Subjt:  PFHLQQSAPAPAPPQYPSPYVAPPGP-PPVPLPVAPVYPAPAP-----PPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSE------------

Query:  ------IEHKAETKKKAIPRK-------AAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTD
              +E   E KKK  P K       AAG SWED +L EW  +D+R+FCGDLGNEVNDD+L++AFSR+PSF  A+V+RDKRTGKTKGYGFVSF +P D
Subjt:  ------IEHKAETKKKAIPRK-------AAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTD

Query:  LAGALKEMNEERADGWDKERTDYEALGRHKNHTQKKSKLPKK
           A++EMN +       +    +   R+ +  +KK +  KK
Subjt:  LAGALKEMNEERADGWDKERTDYEALGRHKNHTQKKSKLPKK

Q6AXT7 RNA-binding protein 421.4e-2848.55Show/hide
Query:  APPGP----PPVPLPVAPVYPAPAPPPAVY-----TLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKKKAIPRK-------AAGQSWED
        AP GP    P +PL +A   P P P P         LP  +  + L  R      P   E     +A    E   E KKK  P K       AAG SWED
Subjt:  APPGP----PPVPLPVAPVYPAPAPPPAVY-----TLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKKKAIPRK-------AAGQSWED

Query:  PTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMN
        P+L EW  +D+R+FCGDLGNEVNDD+L++AFSRFPSF  A+V+RDKRTGKTKGYGFVSF +P+D   A++EMN
Subjt:  PTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMN

Q91V81 RNA-binding protein 421.4e-2848.55Show/hide
Query:  APPGP----PPVPLPVAPVYPAPAPPPAVY-----TLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKKKAIPRK-------AAGQSWED
        AP GP    P +PL +A   P P P P         LP  +  + L  R      P   E     +A    E   E KKK  P K       AAG SWED
Subjt:  APPGP----PPVPLPVAPVYPAPAPPPAVY-----TLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKKKAIPRK-------AAGQSWED

Query:  PTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMN
        P+L EW  +D+R+FCGDLGNEVNDD+L++AFSRFPSF  A+V+RDKRTGKTKGYGFVSF +P+D   A++EMN
Subjt:  PTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMN

Q9BTD8 RNA-binding protein 421.4e-2848.55Show/hide
Query:  APPGP----PPVPLPVAPVYPAPAPPPAVY-----TLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKKKAIPRK-------AAGQSWED
        AP GP    P +PL +A   P P P P         LP  +  + L  R      P   E     +A    E   E KKK  P K       AAG SWED
Subjt:  APPGP----PPVPLPVAPVYPAPAPPPAVY-----TLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKKKAIPRK-------AAGQSWED

Query:  PTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMN
        P+L EW  +D+R+FCGDLGNEVNDD+L++AFSRFPSF  A+V+RDKRTGKTKGYGFVSF +P+D   A++EMN
Subjt:  PTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMN

Arabidopsis top hitse value%identityAlignment
AT1G11650.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.3e-1047.69Show/hide
Query:  DYRLFCGDLGNEVNDDVLSKAF-SRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMN
        DY +F GDL  +V D +L + F + +PS   A+VV D+ TG+TKGYGFV FS+ ++   A+ EMN
Subjt:  DYRLFCGDLGNEVNDDVLSKAF-SRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMN

AT1G11650.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.3e-1047.69Show/hide
Query:  DYRLFCGDLGNEVNDDVLSKAF-SRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMN
        DY +F GDL  +V D +L + F + +PS   A+VV D+ TG+TKGYGFV FS+ ++   A+ EMN
Subjt:  DYRLFCGDLGNEVNDDVLSKAF-SRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMN

AT1G47490.1 RNA-binding protein 47C5.2e-1044.62Show/hide
Query:  DYRLFCGDLGNEVNDDVLSKAFS-RFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMN
        D  +F GDL  +V+D++L + FS ++PS   A+VV D  TG++KGYGFV F +  +   A+ EMN
Subjt:  DYRLFCGDLGNEVNDDVLSKAFS-RFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMN

AT1G47490.2 RNA-binding protein 47C5.2e-1044.62Show/hide
Query:  DYRLFCGDLGNEVNDDVLSKAFS-RFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMN
        D  +F GDL  +V+D++L + FS ++PS   A+VV D  TG++KGYGFV F +  +   A+ EMN
Subjt:  DYRLFCGDLGNEVNDDVLSKAFS-RFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMN

AT3G04500.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.8e-7866.8Show/hide
Query:  PSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGP----PPVPLPVAPVYPAP-APPPAVYTLPQYQQAQQLFQRDAQTITPE
        PSS   S+SSSS+SQ+TY+  SY+  P+            Q P PY A P P    P   +P A VYP P  P PAVY  PQYQQA QLFQRDAQTITPE
Subjt:  PSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGP----PPVPLPVAPVYPAP-APPPAVYTLPQYQQAQQLFQRDAQTITPE

Query:  ALESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTD
        ALE+VKAALASSE EHKAETKK+AIPRKAAGQSWEDPTL+EWPENDYRLFCGDLGNEVNDDVLSKAF+RFP+FNMA+V+RDKRTGKTKGYGFVSF NP D
Subjt:  ALESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTD

Query:  LAGALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK
        LA ALKEMN +         R   W KERTD EA  R K+H+ KK K  KKS +HK
Subjt:  LAGALKEMNEE---------RADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGTCCTTCCTCGGCTCCTTCATCAGCTTCTTCCTCTTCAGCTTCCCAATTTACGTATTCAAACGGTTCTTACTTCCCTTTACCTTTCCATCTCCAGCAG
TCTGCTCCAGCGCCCGCACCCCCCCAGTATCCCTCTCCCTATGTCGCTCCTCCAGGTCCTCCGCCAGTTCCCCTGCCCGTCGCACCTGTTTATCCTGCTCCCGCT
CCGCCTCCGGCGGTCTATACTCTCCCTCAGTACCAGCAGGCCCAACAATTGTTTCAAAGGGATGCTCAAACCATAACACCGGAAGCTCTTGAGAGTGTTAAAGCT
GCTCTTGCAAGTAGTGAGATCGAGCATAAAGCAGAAACAAAAAAGAAAGCTATTCCTCGCAAAGCTGCCGGGCAATCTTGGGAGGATCCAACTCTTGCTGAGTGG
CCTGAAAATGATTACCGTCTATTTTGTGGTGATCTTGGCAATGAAGTGAATGATGATGTACTCTCTAAAGCATTCTCACGATTTCCTTCATTTAACATGGCAAGA
GTTGTTAGAGATAAGCGAACTGGTAAAACCAAGGGCTATGGATTTGTTAGCTTCTCCAATCCTACCGACCTTGCTGGAGCACTTAAAGAAATGAATGAGGAACGA
GCAGATGGTTGGGATAAGGAGAGGACAGACTATGAAGCCCTAGGAAGACACAAGAATCACACACAAAAGAAATCAAAGCTTCCAAAGAAGAGTGCTGTGCACAAG
GTAAGTCACTCACATCCCTGTATCTCTACTTTTGCCTCGAATATAATCATCAATCATGTGATCGTACCCGTATGTCTAACCAGTGATCACAAATTTCATGAAGGT
AGTAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGTCCTTCCTCGGCTCCTTCATCAGCTTCTTCCTCTTCAGCTTCCCAATTTACGTATTCAAACGGTTCTTACTTCCCTTTACCTTTCCATCTCCAGCAG
TCTGCTCCAGCGCCCGCACCCCCCCAGTATCCCTCTCCCTATGTCGCTCCTCCAGGTCCTCCGCCAGTTCCCCTGCCCGTCGCACCTGTTTATCCTGCTCCCGCT
CCGCCTCCGGCGGTCTATACTCTCCCTCAGTACCAGCAGGCCCAACAATTGTTTCAAAGGGATGCTCAAACCATAACACCGGAAGCTCTTGAGAGTGTTAAAGCT
GCTCTTGCAAGTAGTGAGATCGAGCATAAAGCAGAAACAAAAAAGAAAGCTATTCCTCGCAAAGCTGCCGGGCAATCTTGGGAGGATCCAACTCTTGCTGAGTGG
CCTGAAAATGATTACCGTCTATTTTGTGGTGATCTTGGCAATGAAGTGAATGATGATGTACTCTCTAAAGCATTCTCACGATTTCCTTCATTTAACATGGCAAGA
GTTGTTAGAGATAAGCGAACTGGTAAAACCAAGGGCTATGGATTTGTTAGCTTCTCCAATCCTACCGACCTTGCTGGAGCACTTAAAGAAATGAATGAGGAACGA
GCAGATGGTTGGGATAAGGAGAGGACAGACTATGAAGCCCTAGGAAGACACAAGAATCACACACAAAAGAAATCAAAGCTTCCAAAGAAGAGTGCTGTGCACAAG
GTAAGTCACTCACATCCCTGTATCTCTACTTTTGCCTCGAATATAATCATCAATCATGTGATCGTACCCGTATGTCTAACCAGTGATCACAAATTTCATGAAGGT
AGTAACTGA
Protein sequenceShow/hide protein sequence
MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKA
ALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNEER
ADGWDKERTDYEALGRHKNHTQKKSKLPKKSAVHKVSHSHPCISTFASNIIINHVIVPVCLTSDHKFHEGSN