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Pay0013619 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0013619
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionArabinogalactan peptide 23
Genome locationchr04:24306162..24306889
RNA-Seq ExpressionPay0013619
SyntenyPay0013619
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048336.1 Arabinogalactan peptide 23 [Cucumis melo var. makuwa]3.5e-19100Show/hide
Query:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
Subjt:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
KAG7018086.1 hypothetical protein SDJN02_19952, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-1486.21Show/hide
Query:  MKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MKKIACA+LFAAATVSA VA D+ALAPAPGPSSGAA GLPAIGS++GASLLS AAYYL
Subjt:  MKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
KGN58598.1 hypothetical protein Csa_001979 [Cucumis sativus]2.8e-1688.33Show/hide
Query:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIACA+LFAAATV+A VA D+ALAPAPGPSSGA IG+PAIGSLVGASLLSFAAYYL
Subjt:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
XP_022983304.1 arabinogalactan peptide 23-like [Cucurbita maxima]1.8e-1586.67Show/hide
Query:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIACA+LFAAATVSA VA D+ALAPAPGPSSGAA GLPAIGS +GASLLS AAYYL
Subjt:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
XP_038905644.1 arabinogalactan protein 23-like [Benincasa hispida]9.7e-1790Show/hide
Query:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIACA+LFAAATVSAAVA D+ALAPAPGPSSGAAIGLPAIGS++GASLLS AAYYL
Subjt:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
TrEMBL top hitse value%identityAlignment
A0A0A0L9U8 Uncharacterized protein1.4e-1688.33Show/hide
Query:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIACA+LFAAATV+A VA D+ALAPAPGPSSGA IG+PAIGSLVGASLLSFAAYYL
Subjt:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
A0A5A7U280 Arabinogalactan peptide 231.7e-19100Show/hide
Query:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
Subjt:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
A0A6J1HQG2 arabinogalactan peptide 23-like6.3e-1478.33Show/hide
Query:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKI CA+LFAAATV+AAVA+++A APAPGP+S A +GLPAIGSL+GASLLS AAYYL
Subjt:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
A0A6J1J6Y9 arabinogalactan peptide 23-like8.8e-1686.67Show/hide
Query:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIACA+LFAAATVSA VA D+ALAPAPGPSSGAA GLPAIGS +GASLLS AAYYL
Subjt:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
A0A6J1K873 arabinogalactan peptide 23-like1.7e-1481.67Show/hide
Query:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEM KI CAILFAAATVSA VA D+A APAPGP+SGA +GLPAIGSL+GASLLS AAYYL
Subjt:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 231.7e-1163.33Show/hide
Query:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIAC +LFAAA+++A +A ++  APAPGP+S A+  LPA+GSLVGASL+S  +YYL
Subjt:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)8.4e-1162.3Show/hide
Query:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGP-SSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIAC ++FAAA+++A +A +   APAPGP +SGA++ +PA+GSLVGASL+S  AYYL
Subjt:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGP-SSGAAIGLPAIGSLVGASLLSFAAYYL
AT3G57690.1 arabinogalactan protein 231.2e-1263.33Show/hide
Query:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL
        MEMKKIAC +LFAAA+++A +A ++  APAPGP+S A+  LPA+GSLVGASL+S  +YYL
Subjt:  MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGAAGAAGATCGCCTGCGCTATTCTCTTCGCTGCCGCAACCGTCAGCGCCGCCGTAGCTGAAGATAAGGCGTTGGCTCCAGCACCTGGACCAAGCAGC
GGCGCCGCCATTGGTCTCCCGGCAATTGGGTCTCTGGTCGGTGCTTCGTTGCTCTCCTTCGCCGCTTACTACTTGTAA
mRNA sequenceShow/hide mRNA sequence
GAGAGAGAGAGAGAAAATCCAGCCCAGAAAGAAAAGAATTCCGTAATTTCCCAACCACGAATCGCACTGGCTCTTCGATATCCCTCCAAATAAGGACCTTTCTTC
TAAATATACCTCTTCAAAATTCAACAACTAATTACCTTCCACCGAACATTCCTCCAGTTTCCACCTATAAATCACACCCATTCCACCTCATTTTCCTCAGGCAGC
GATTTCCATAGCGAAGGCGTTTTTTGGTGCTTTGATCCTGAATCAAACGCCACCAAAAACATAAATTAAAAAAAAAAAGAAAAAAAAATACCTAAAGAATCGCAA
TGGAGATGAAGAAGATCGCCTGCGCTATTCTCTTCGCTGCCGCAACCGTCAGCGCCGCCGTAGCTGAAGATAAGGCGTTGGCTCCAGCACCTGGACCAAGCAGCG
GCGCCGCCATTGGTCTCCCGGCAATTGGGTCTCTGGTCGGTGCTTCGTTGCTCTCCTTCGCCGCTTACTACTTGTAATGTAATGATGGATTTGATAGTGGGGATA
TTGGAGGAGAGTGAAATGGAATGATGATAGATTTGGTTGATATGCATTTTATATATATAATGGGAGGAAGAAGAATTTTATTGTTGTTCTATTCTCAGTTTATTT
GTTTATTTTAAGTATTGTTTTTAAAATTGGAAAAATAAAATACGATTATTAGTAATCAATAAATAATAATAATTATAATAATACGTCTCTTTAATTAA
Protein sequenceShow/hide protein sequence
MEMKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL