; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0013647 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0013647
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionIntegrase
Genome locationchr12:3629206..3629688
RNA-Seq ExpressionPay0013647
SyntenyPay0013647
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003729 - mRNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038926.1 integrase [Cucumis melo var. makuwa]1.8e-7899.33Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA

KAA0039947.1 integrase [Cucumis melo var. makuwa]1.8e-7899.33Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA

KAA0048003.1 integrase [Cucumis melo var. makuwa]1.8e-7899.33Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA

KAA0060377.1 integrase [Cucumis melo var. makuwa]1.8e-7899.33Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA

TYJ95504.1 integrase [Cucumis melo var. makuwa]1.8e-7899.33Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA

TrEMBL top hitse value%identityAlignment
A0A5D3BQ81 Integrase8.8e-7999.33Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA

A0A5D3CLV1 Integrase8.8e-7999.33Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA

A0A5D3CXM6 Integrase8.8e-7999.33Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA

A0A5D3D538 Integrase8.8e-7999.33Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA

A0A5D3E3T2 Integrase8.8e-7999.33Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESV+FGFCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
        SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAA

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1612.2e-2647.9Show/hide
Query:  YRSLVGSLMYL-TATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTS
        Y S VG++MYL   TRPD+  AV +LS+F ++P  +HW+A KRVLRY+  T  +G+ + +   + L G+ D+DW G+V+  +STSGY+F +  G  SW S
Subjt:  YRSLVGSLMYL-TATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTS

Query:  KKQSVVALSTTEAEYISLA
        KKQ  VALS+TE EY++L+
Subjt:  KKQSVVALSTTEAEYISLA

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-2845.75Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPS------LYRSLVGSLMY-LTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSES
        M+NA P +TP+  +LKL K      V+         Y S VGSLMY +  TRPDI  AV ++SRF+ NP + HWEA K +LRY+ GT    + +   S+ 
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPS------LYRSLVGSLMY-LTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSES

Query:  VLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYIS
        +L G+ D+D  G++D+ KS++GY+F+   G  SW SK Q  VALSTTEAEYI+
Subjt:  VLFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYIS

P92519 Uncharacterized mitochondrial protein AtMg008101.8e-2540.26Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        M +  P +TP+   L        +  DPS +RS+VG+L YLT TRPDI +AV+++ + M  P  + ++  KRVLRY+ GTI  G+Y  K S+  +  FCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAVDVKL
        SDW G     +ST+G+   +G  + SW++K+Q  V+ S+TE EY +LA    +L
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAVDVKL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.1e-3047.97Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        M  A P  TPM  + KL      +  DP+ YR +VGSL YL  TRPDI +AV+ LS+FM  P   H +A KR+LRY+ GT N GI+ KK +   L  + D
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLA
        +DW G+ DD+ ST+GY+  +G    SW+SKKQ  V  S+TEAEY S+A
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLA

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.6e-3146.1Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        M  A P  TPM  + KL      +  DP+ YR +VGSL YL  TRPD+ +AV+ LS++M  P   HW A KRVLRY+ GT + GI+ KK +   L  + D
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAVDVKL
        +DW G+ DD+ ST+GY+  +G    SW+SKKQ  V  S+TEAEY S+A    +L
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAVDVKL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.1e-2541.26Show/hide
Query:  PCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGG
        P + PMD ++       G+ VD   YR L+G LMYL  TR DI FAV+ LS+F   P+ +H +A  ++L YI GT+  G++Y   +E  L  F D+ +  
Subjt:  PCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGG

Query:  NVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLA
          D  +ST+GY   +G+ + SW SKKQ VV+ S+ EAEY +L+
Subjt:  NVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLA

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.8e-1241.03Show/hide
Query:  MYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGY
        MYLT TRPD+ FAV+ LS+F +  + +  +A  +VL Y+ GT+  G++Y   S+  L  F DSDW    D  +S +G+
Subjt:  MYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHKSTSGY

ATMG00810.1 DNA/RNA polymerases superfamily protein1.3e-2640.26Show/hide
Query:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD
        M +  P +TP+   L        +  DPS +RS+VG+L YLT TRPDI +AV+++ + M  P  + ++  KRVLRY+ GTI  G+Y  K S+  +  FCD
Subjt:  MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCD

Query:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAVDVKL
        SDW G     +ST+G+   +G  + SW++K+Q  V+ S+TE EY +LA    +L
Subjt:  SDWGGNVDDHKSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAVDVKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATGCTTCACCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTGGAAG
CTTAATGTATTTGACAGCAACAAGACCTGATATTTTATTTGCTGTAAGTATGTTAAGCAGATTTATGACAAACCCGAAAAGAAGTCATTGGGAAGCAGGTAAAAGAGTTC
TTCGTTACATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTTGGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCAT
AAAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTT
AGCTGCAGTGGATGTCAAGCTTTATGGCTTCGGTGGATGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATGCTTCACCTTGCAACACTCCCATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTGGAAG
CTTAATGTATTTGACAGCAACAAGACCTGATATTTTATTTGCTGTAAGTATGTTAAGCAGATTTATGACAAACCCGAAAAGAAGTCATTGGGAAGCAGGTAAAAGAGTTC
TTCGTTACATTCTTGGCACCATTAATTTTGGAATTTATTACAAGAAAGTTTCAGAATCAGTGTTGTTTGGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCAT
AAAAGTACATCTGGTTATGTTTTTAGTATGGGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTT
AGCTGCAGTGGATGTCAAGCTTTATGGCTTCGGTGGATGTTAA
Protein sequenceShow/hide protein sequence
MENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDH
KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAVDVKLYGFGGC