; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0013670 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0013670
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionribosome maturation protein SBDS
Genome locationchr03:9928059..9933207
RNA-Seq ExpressionPay0013670
SyntenyPay0013670
Gene Ontology termsGO:0042256 - mature ribosome assembly (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002140 - Ribosome maturation protein Sdo1/SBDS
IPR013087 - Zinc finger C2H2-type
IPR018023 - Ribosome maturation protein SBDS, conserved site
IPR018978 - Ribosome maturation protein Sdo1/SBDS, C-terminal
IPR019783 - Ribosome maturation protein Sdo1/SBDS, N-terminal
IPR036236 - Zinc finger C2H2 superfamily
IPR036786 - Ribosome maturation protein SBDS, N-terminal domain superfamily
IPR037188 - Ribosome maturation protein Sdo1/SBDS, central domain superfamily
IPR039100 - Ribosome maturation protein Sdo1/SBDS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146781.1 ribosome maturation protein SBDS [Cucumis sativus]8.2e-19696.66Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVE+DLDEVLQSQIVYSNVSKGVLAKTK+LKAAFGTDDQTEICLKILKEGELQVAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMR+IHFAVDPNHSSKKQALEVIHELQK FPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC
        S+DQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVEL PRQLKET+S IPQLSEALQKQTIS+NSDNAPKEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC

Query:  STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        STCNVAVGD TKFREH+KS+WHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Subjt:  STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

XP_008466694.1 PREDICTED: ribosome maturation protein SBDS [Cucumis melo]7.6e-202100Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC
        SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC

Query:  STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Subjt:  STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

XP_022936066.1 ribosome maturation protein SBDS [Cucurbita moschata]5.0e-18591.11Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMR+RY VPEQN PSLLDKLN+WSASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKR
        SNDQSGNQQRS+ICELDPSFYRDCNPLMSEL G+FEVLSFCLHEEGDTNVDQY +DD+ENVEL PR +KE+ES+IPQLSEALQKQ ISV+  N  KEGKR
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKR

Query:  CSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        CSTCNV VGDA +FREHHKS+WHKHNVKRKTKNLPPLTEEEC VE+AMGDSESDLKEYSF
Subjt:  CSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

XP_023535044.1 ribosome maturation protein SBDS [Cucurbita pepo subsp. pepo]8.5e-18591.39Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMR+RY VPEQN PSLLDKLNAWSASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKR
        SND SGNQQRSIICELDPSFYRDCNPLMSEL G+FEVLSFCLHEEGDTNVDQY +DD+ENVEL PR +KE+ES+IPQLSEALQKQ ISV+  N  KEGKR
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKR

Query:  CSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        CSTCNV VGDA +FREHHKS+WHKHNVKRKTKNLPPLTEEEC VE+AMGDSESDLKEYSF
Subjt:  CSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

XP_038886377.1 ribosome maturation protein SBDS [Benincasa hispida]3.8e-19394.99Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQTEICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMR+RYIVPEQN PSLLDKLNAWSASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC
        SNDQSGNQQRSIICELDPSFYRDCNPLMSEL GRFEVLSFCLHEEGDTNVDQY+DDYENVEL PRQ+KE+ES+IPQL+EALQKQTISVNS+NA KEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC

Query:  STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        STCNV VGDAT+FREHHKS+WHKHNVKRKTKNLPPLTEEECTVELAMGD+ESDLKEYSF
Subjt:  STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

TrEMBL top hitse value%identityAlignment
A0A0A0KIY6 C2H2-type domain-containing protein4.0e-19696.66Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVE+DLDEVLQSQIVYSNVSKGVLAKTK+LKAAFGTDDQTEICLKILKEGELQVAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMR+IHFAVDPNHSSKKQALEVIHELQK FPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC
        S+DQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVEL PRQLKET+S IPQLSEALQKQTIS+NSDNAPKEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC

Query:  STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        STCNVAVGD TKFREH+KS+WHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Subjt:  STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

A0A1S3CRW0 ribosome maturation protein SBDS3.7e-202100Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC
        SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC

Query:  STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Subjt:  STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

A0A5A7UXA4 Ribosome maturation protein SBDS3.7e-202100Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC
        SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC

Query:  STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Subjt:  STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

A0A6J1F6G6 ribosome maturation protein SBDS2.4e-18591.11Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMR+RY VPEQN PSLLDKLN+WSASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKR
        SNDQSGNQQRS+ICELDPSFYRDCNPLMSEL G+FEVLSFCLHEEGDTNVDQY +DD+ENVEL PR +KE+ES+IPQLSEALQKQ ISV+  N  KEGKR
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKR

Query:  CSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        CSTCNV VGDA +FREHHKS+WHKHNVKRKTKNLPPLTEEEC VE+AMGDSESDLKEYSF
Subjt:  CSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

A0A6J1IK36 ribosome maturation protein SBDS7.0e-18590.56Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMR+RY VPEQN PSLLDKLN+WSASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKR
        SNDQSGNQQRS+ICELDPSFYRDCNPLMSEL G+FEVLSFCLHEEGDTNVDQY +DD+ENVEL PR +KE+ES+IPQLSEALQKQ ISV+  N  KEGKR
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKR

Query:  CSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        CSTCNV VGDA +FREHHKS+WHKHN+KRKTKNLPPLTEEEC VE+A+GDSESDLKEYSF
Subjt:  CSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

SwissProt top hitse value%identityAlignment
P70122 Ribosome maturation protein SBDS1.2e-6755.87Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE
        S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIVSND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M++IH++V PN S+K+QALEVI +L+++  I+R+ MRLR+I+P      L +KL      + S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIVSND

Query:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD
         S  QQ  I+C +DP  +R+ + L+   ++  G  EVLS    EEGD
Subjt:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD

Q3SWZ6 Ribosome maturation protein SBDS4.4e-6755.87Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE
        S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIVSND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M++IH++V PN S+K+QALEVI +L+++  I+R+ MRLR+I+P      L +KL      I S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIVSND

Query:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD
            QQ  I+C +DP  +R+ + L+   ++  G  EVLS    EEGD
Subjt:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD

Q5RAZ2 Ribosome maturation protein SBDS8.3e-6655.06Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE
        S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIVSND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M++IH++V  N S+K+QALEVI +L+++  I+R+ MRLR+I+P      L +KL      I S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIVSND

Query:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD
            QQ  I+C +DP  +R+ + L+   ++  G  EVL+    EEGD
Subjt:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD

Q5RK30 Ribosome maturation protein SBDS2.6e-6755.47Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE
        S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIVSND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M++IH++V PN S+K+QALEVI +L+++  I+R+ MRLR+++P      L +KL      + S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIVSND

Query:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD
         S  QQ  I+C +DP  +R+ + L+   ++  G  EVLS    EEGD
Subjt:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD

Q9Y3A5 Ribosome maturation protein SBDS8.3e-6655.06Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE
        S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIVSND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M++IH++V  N S+K+QALEVI +L+++  I+R+ MRLR+I+P      L +KL      I S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIVSND

Query:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD
            QQ  I+C +DP  +R+ + L+   ++  G  EVL+    EEGD
Subjt:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD

Arabidopsis top hitse value%identityAlignment
AT1G43860.1 sequence-specific DNA binding transcription factors3.2e-12962.53Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MS++LVQP+GQKRLTNVAVVRLKK G RFEIACYKNKVLSWRSGVEKD+DEVLQS  VYSNVSKGVLAK+KDL  +FG+DD T+IC+ IL++GELQVAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV
        ERE+Q S+QFRDIATIVMQKT NPET+RPYTISM+ERLM EIHFAVDP+ +SKKQAL+VI ELQK FPIKRSPMRLR  VP QN PSLL+KL  W  S+V
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYE-----NVELLP--RQLKETESSIPQLSEALQKQTISVNSD--
        S D+SG Q  S +CE++P  +R+C+  +  + GR E+L+  +H EGDT++D Y++  +     +  LLP   + K+    + +LS+ LQKQ IS   +  
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYE-----NVELLP--RQLKETESSIPQLSEALQKQTISVNSD--

Query:  ---NAPKEGKRCSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
              K+G +CSTCN  VG+A ++REH KSDWHKHN+KRKT+ LPP++ +EC  E+ M DS +DLK+YSF
Subjt:  ---NAPKEGKRCSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

AT2G24500.1 Zinc finger protein 6227.1e-0440.48Show/hide
Query:  GKRCSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTE
        G  C++CN    D  + + H+KS+WH++N+KRK   +P +TE
Subjt:  GKRCSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTE

AT4G31420.1 Zinc finger protein 6221.4e-0442.86Show/hide
Query:  GKRCSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTE
        G  C+ CN+   D  +   H+KSDWH++N+KRK   +P +TE
Subjt:  GKRCSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTE

AT4G31420.2 Zinc finger protein 6221.4e-0442.86Show/hide
Query:  GKRCSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTE
        G  C+ CN+   D  +   H+KSDWH++N+KRK   +P +TE
Subjt:  GKRCSTCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCGATCGCTGGTGCAGCCGATCGGGCAGAAGCGGCTGACCAACGTCGCCGTGGTTCGTTTGAAGAAACATGGTCTTCGCTTCGAGATTGCCTGTTACAAG
AACAAGGTCCTTTCATGGCGCTCTGGCGTGGAGAAAGACTTGGATGAGGTTTTGCAGTCGCAAATTGTTTATTCGAATGTTTCAAAAGGAGTTCTTGCAAAAACA
AAAGATTTGAAAGCAGCTTTTGGTACAGATGATCAGACGGAAATTTGTTTGAAGATTCTTAAAGAAGGGGAACTTCAAGTTGCAGGGAAGGAGAGGGAGGCTCAA
TTATCCAATCAGTTTCGTGATATTGCAACTATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATTGAGCGACTAATGCGT
GAAATTCATTTTGCTGTCGATCCAAATCACAGCTCAAAGAAACAGGCACTAGAGGTTATTCATGAGCTTCAGAAACAGTTCCCAATTAAACGGTCACCTATGAGG
TTACGATATATTGTACCTGAACAGAACGTCCCTTCTCTTCTTGATAAGTTAAATGCTTGGAGTGCTAGTATTGTTTCCAATGACCAGTCTGGAAATCAGCAACGA
AGCATAATTTGTGAATTGGATCCTAGCTTTTATCGAGACTGCAATCCACTAATGAGTGAACTACATGGCAGATTTGAAGTTCTCTCTTTTTGTTTGCACGAGGAA
GGAGACACCAATGTGGATCAATACGAGGACGATTATGAGAATGTGGAACTGCTACCAAGGCAATTAAAGGAAACAGAATCGTCTATTCCTCAGCTAAGTGAAGCT
TTACAAAAGCAGACAATTTCTGTCAACAGTGATAACGCCCCAAAGGAAGGAAAACGCTGCAGCACATGCAACGTAGCCGTGGGAGATGCTACAAAGTTTAGAGAG
CATCACAAGAGTGATTGGCATAAGCATAATGTCAAGCGCAAAACCAAGAATCTTCCACCTCTGACTGAAGAAGAGTGCACGGTAGAATTGGCAATGGGTGATTCA
GAGTCTGACCTGAAGGAGTATTCATTTTGA
mRNA sequenceShow/hide mRNA sequence
GAAAAAGATCAGGCAAAGTAGATGATTTAAAATCAGAATACTTTTGTATTTTGAAGAAAGCTGGAGGGGCAAACATGTAAGTAAAGCTCGTAAAGCATAATATAT
ATAAACAAAGTGGAGTGACAAACCTTCGTTTTGTGTTATTATCGTTTCCCTTTTTAATCCAATCCCCAAACTTTAACGAAGATGTCCCGATCGCTGGTGCAGCCG
ATCGGGCAGAAGCGGCTGACCAACGTCGCCGTGGTTCGTTTGAAGAAACATGGTCTTCGCTTCGAGATTGCCTGTTACAAGAACAAGGTCCTTTCATGGCGCTCT
GGCGTGGAGAAAGACTTGGATGAGGTTTTGCAGTCGCAAATTGTTTATTCGAATGTTTCAAAAGGAGTTCTTGCAAAAACAAAAGATTTGAAAGCAGCTTTTGGT
ACAGATGATCAGACGGAAATTTGTTTGAAGATTCTTAAAGAAGGGGAACTTCAAGTTGCAGGGAAGGAGAGGGAGGCTCAATTATCCAATCAGTTTCGTGATATT
GCAACTATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATTGAGCGACTAATGCGTGAAATTCATTTTGCTGTCGATCCA
AATCACAGCTCAAAGAAACAGGCACTAGAGGTTATTCATGAGCTTCAGAAACAGTTCCCAATTAAACGGTCACCTATGAGGTTACGATATATTGTACCTGAACAG
AACGTCCCTTCTCTTCTTGATAAGTTAAATGCTTGGAGTGCTAGTATTGTTTCCAATGACCAGTCTGGAAATCAGCAACGAAGCATAATTTGTGAATTGGATCCT
AGCTTTTATCGAGACTGCAATCCACTAATGAGTGAACTACATGGCAGATTTGAAGTTCTCTCTTTTTGTTTGCACGAGGAAGGAGACACCAATGTGGATCAATAC
GAGGACGATTATGAGAATGTGGAACTGCTACCAAGGCAATTAAAGGAAACAGAATCGTCTATTCCTCAGCTAAGTGAAGCTTTACAAAAGCAGACAATTTCTGTC
AACAGTGATAACGCCCCAAAGGAAGGAAAACGCTGCAGCACATGCAACGTAGCCGTGGGAGATGCTACAAAGTTTAGAGAGCATCACAAGAGTGATTGGCATAAG
CATAATGTCAAGCGCAAAACCAAGAATCTTCCACCTCTGACTGAAGAAGAGTGCACGGTAGAATTGGCAATGGGTGATTCAGAGTCTGACCTGAAGGAGTATTCA
TTTTGAACTACCTGCCGTGTTTATGCTTCGTTGAATAGCTTTGAGGTTTTTGTATTTTAGTTTTGCTGCTAAATAGTATGAAACAATACTATTGTATCTTACACT
TGTTAGACGGTCTCAACATGTCTCGCATCATGTAACAATCTCAATTTTCATAGTTTTGTCATTTTAGTGCTTTTTGTACTAGAAAGAATGTAATGACTGAAATAT
GACCGCTTTGTAAATCAATTCGGGTTTGATTTAAATGTTTTATGTTTTCATAAATGGAAAAAAATATTGTACAAACCCAAACAGATCCACGACCCTTGTTCAAAT
TTAAAACAGAACAATTCCTTATTGC
Protein sequenceShow/hide protein sequence
MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQ
LSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWSASIVSNDQSGNQQR
SIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRCSTCNVAVGDATKFRE
HHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF