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Pay0013706 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0013706
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPHD finger protein ALFIN-LIKE 1-like
Genome locationchr06:34344601..34345664
RNA-Seq ExpressionPay0013706
SyntenyPay0013706
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0042393 - histone binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041041.1 PHD finger protein ALFIN-LIKE 1-like [Cucumis melo var. makuwa]2.1e-1674.6Show/hide
Query:  GLSKIFLFSFRHGYSFHQFQNDVEEIFRLRPLAALVLALAYDAGEFYGPCDPGHAAFLILVIQ
        G+ +  +     G+++  FQNDVEEIFRLRPLAALVLALAYDAGEFYGPCDPGHAAFLILVIQ
Subjt:  GLSKIFLFSFRHGYSFHQFQNDVEEIFRLRPLAALVLALAYDAGEFYGPCDPGHAAFLILVIQ
KAA0046503.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.1e-0471.43Show/hide
Query:  EIFRLRPLAALVLALAYDAGEFYGPCDPGHAAFLI
        E FRL PLAALVLALAYD GEFY PCDPG  +  +
Subjt:  EIFRLRPLAALVLALAYDAGEFYGPCDPGHAAFLI
TrEMBL top hitse value%identityAlignment
A0A5A7THA3 PHD finger protein ALFIN-LIKE 1-like1.0e-1674.6Show/hide
Query:  GLSKIFLFSFRHGYSFHQFQNDVEEIFRLRPLAALVLALAYDAGEFYGPCDPGHAAFLILVIQ
        G+ +  +     G+++  FQNDVEEIFRLRPLAALVLALAYDAGEFYGPCDPGHAAFLILVIQ
Subjt:  GLSKIFLFSFRHGYSFHQFQNDVEEIFRLRPLAALVLALAYDAGEFYGPCDPGHAAFLILVIQ
A0A5D3BRV3 Retrovirus-related Pol polyprotein from transposon TNT 1-945.3e-0571.43Show/hide
Query:  EIFRLRPLAALVLALAYDAGEFYGPCDPGHAAFLI
        E FRL PLAALVLALAYD GEFY PCDPG  +  +
Subjt:  EIFRLRPLAALVLALAYDAGEFYGPCDPGHAAFLI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTTCTCGAAGGGTGGACTTGGGCTTTCTAAGATCTTTTTGTTTTCGTTCCGTCATGGATATTCCTTCCACCAGTTCCAAAATGACGTCGAAGAGATTTTCAGATT
ACGCCCGCTTGCCGCTCTTGTTCTCGCCCTCGCTTACGATGCCGGTGAATTCTACGGTCCTTGTGATCCAGGTCATGCGGCTTTCTTAATTCTTGTGATCCAGGTGAGGG
AAGTTTGTGTCTGTATGGACATCCTAATGAAACATGGGAAGTGGTTCAAGAGCCTGCACTTGGAATTAATTTTGCAAGAGATGGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGACCTTCTCGAAGGGTGGACTTGGGCTTTCTAAGATCTTTTTGTTTTCGTTCCGTCATGGATATTCCTTCCACCAGTTCCAAAATGACGTCGAAGAGATTTTCAGATT
ACGCCCGCTTGCCGCTCTTGTTCTCGCCCTCGCTTACGATGCCGGTGAATTCTACGGTCCTTGTGATCCAGGTCATGCGGCTTTCTTAATTCTTGTGATCCAGGTGAGGG
AAGTTTGTGTCTGTATGGACATCCTAATGAAACATGGGAAGTGGTTCAAGAGCCTGCACTTGGAATTAATTTTGCAAGAGATGGCATGA
Protein sequenceShow/hide protein sequence
MTFSKGGLGLSKIFLFSFRHGYSFHQFQNDVEEIFRLRPLAALVLALAYDAGEFYGPCDPGHAAFLILVIQVREVCVCMDILMKHGKWFKSLHLELILQEMA