; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0013805 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0013805
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr01:29944428..29947568
RNA-Seq ExpressionPay0013805
SyntenyPay0013805
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR021109 - Aspartic peptidase domain superfamily
IPR036397 - Ribonuclease H superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040695.1 pol protein [Cucumis melo var. makuwa]4.7e-28680.76Show/hide
Query:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
        RKGAPFVWSKACEDSFQNLKQKLVTAPVLTV DGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
Subjt:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI

Query:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
        QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
Subjt:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI

Query:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK
        IDAQSNDPYLVEKRGLAEAGQA EFS+SSDGGLLFER LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW NMKREVAEFVS+CLVCQQVK
Subjt:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK

Query:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP--------------------------------------------
        APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTK AHFVP                                            
Subjt:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP--------------------------------------------

Query:  ------------AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP---------------------
                    AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI MAPFE LYGKCCRSP                     
Subjt:  ------------AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP---------------------

Query:  -------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNR
                                       RIGPVAYRL LPPSLSTVHDV HVSMLRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVK LRN+
Subjt:  -------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNR

Query:  EIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
        EIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
Subjt:  EIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE

KAA0040695.1 pol protein [Cucumis melo var. makuwa]1.1e-0875.56Show/hide
Query:  MLDFDVILGMDWLAANHASIDCSRKEVAFNPPRWPVLNLREKGQG
        MLDFDVILGMDWLAANHASIDCSRKEV FNPP   + + + KG G
Subjt:  MLDFDVILGMDWLAANHASIDCSRKEVAFNPPRWPVLNLREKGQG

KAA0040695.1 pol protein [Cucumis melo var. makuwa]1.4e-28577.05Show/hide
Query:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
        RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
Subjt:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI

Query:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
        QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
Subjt:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI

Query:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK
        IDAQSNDPYLVEKRGLAEAGQ  EFS+SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK
Subjt:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK

Query:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP--------------------------------------------
        APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP                                            
Subjt:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP--------------------------------------------

Query:  ------------AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP---------------------
                    AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI MAPFE LYG+CCRSP                     
Subjt:  ------------AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP---------------------

Query:  -------------------------------------------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPD
                                                                           RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPD
Subjt:  -------------------------------------------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPD

Query:  PSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        PSHVVDYEPLEIDENLSY EQPVEVLAREVK LRN++IPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Subjt:  PSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

KAA0050009.1 pol protein [Cucumis melo var. makuwa]3.6e-28680.82Show/hide
Query:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
        RKGAPFVWSKACEDSFQNLKQKL+TAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
Subjt:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI

Query:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
        QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVT+QLAQLTVQPTLRQRI
Subjt:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI

Query:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK
        IDAQSNDPYLVEKRGLAEAGQAV FSISS+GGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK
Subjt:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK

Query:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP---------------------AFHPQTDGQTERLNQVLEDMLRA
        APRQKPAGLLQPLS+ E KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP                     AFHPQTD QTERLNQVLEDMLRA
Subjt:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP---------------------AFHPQTDGQTERLNQVLEDMLRA

Query:  CALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP--------------------------------------------------------
        CALEFPGSWDSHLHLMEFAYNNSYQATI MAPFE  YGKCCRSP                                                        
Subjt:  CALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP--------------------------------------------------------

Query:  --------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRN
                                        RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVV+YEPLEIDENLSYTEQPVEVLAREVKMLRN
Subjt:  --------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRN

Query:  REIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        REIPLVKVLWRNH+VEEATWEREDDMRSRYPELFEE
Subjt:  REIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

KAA0051368.1 pol protein [Cucumis melo var. makuwa]1.1e-0875.56Show/hide
Query:  MLDFDVILGMDWLAANHASIDCSRKEVAFNPPRWPVLNLREKGQG
        MLDFDVILGMDWLAANHASIDCSRKEV FNPP   + + + KG G
Subjt:  MLDFDVILGMDWLAANHASIDCSRKEVAFNPPRWPVLNLREKGQG

KAA0051368.1 pol protein [Cucumis melo var. makuwa]3.0e-28580Show/hide
Query:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
        RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
Subjt:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI

Query:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
        QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
Subjt:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI

Query:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK
        IDAQSNDPYLVEKRGL EA QAVEFS+SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK
Subjt:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK

Query:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA-------------------------HFVPAFHPQTDGQTERLNQVLED
        APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKS+                          F  AFHPQTDGQTERLNQVLED
Subjt:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA-------------------------HFVPAFHPQTDGQTERLNQVLED

Query:  MLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP----------------------------------------------------
        MLRACALEFPGSWDSHLHLMEFAYNNSYQATI M PFE LYGKCCRSP                                                    
Subjt:  MLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP----------------------------------------------------

Query:  ------------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVK
                                            RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVK
Subjt:  ------------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVK

Query:  MLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
         LRN+EIPLVKVLWRNHRVEEATWEREDDMRS YP+LFEE
Subjt:  MLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

KAA0057672.1 pol protein [Cucumis melo var. makuwa]5.7e-28476.6Show/hide
Query:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
        RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
Subjt:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI

Query:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
        QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
Subjt:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI

Query:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK
        IDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQVK
Subjt:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK

Query:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP--------------------------------------------
        APRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVP                                            
Subjt:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP--------------------------------------------

Query:  ------------AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP---------------------
                    AFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI MAPFE LY KCCRSP                     
Subjt:  ------------AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP---------------------

Query:  -------------------------------------------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPD
                                                                           RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPD
Subjt:  -------------------------------------------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPD

Query:  PSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        PSHVVDY+PLEIDENLSY EQPVEVLAREVK LRN+EIPLVKVLWRNHR+EEATWEREDDMRSRYPELFEE
Subjt:  PSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

TrEMBL top hitse value%identityAlignment
A0A5A7TGX4 Reverse transcriptase2.3e-28680.76Show/hide
Query:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
        RKGAPFVWSKACEDSFQNLKQKLVTAPVLTV DGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
Subjt:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI

Query:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
        QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
Subjt:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI

Query:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK
        IDAQSNDPYLVEKRGLAEAGQA EFS+SSDGGLLFER LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW NMKREVAEFVS+CLVCQQVK
Subjt:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK

Query:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP--------------------------------------------
        APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTK AHFVP                                            
Subjt:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP--------------------------------------------

Query:  ------------AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP---------------------
                    AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI MAPFE LYGKCCRSP                     
Subjt:  ------------AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP---------------------

Query:  -------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNR
                                       RIGPVAYRL LPPSLSTVHDV HVSMLRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVK LRN+
Subjt:  -------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNR

Query:  EIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
        EIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
Subjt:  EIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE

A0A5A7TGX4 Reverse transcriptase5.3e-0975.56Show/hide
Query:  MLDFDVILGMDWLAANHASIDCSRKEVAFNPPRWPVLNLREKGQG
        MLDFDVILGMDWLAANHASIDCSRKEV FNPP   + + + KG G
Subjt:  MLDFDVILGMDWLAANHASIDCSRKEVAFNPPRWPVLNLREKGQG

A0A5A7TGX4 Reverse transcriptase6.6e-28677.05Show/hide
Query:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
        RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
Subjt:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI

Query:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
        QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
Subjt:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI

Query:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK
        IDAQSNDPYLVEKRGLAEAGQ  EFS+SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK
Subjt:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK

Query:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP--------------------------------------------
        APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP                                            
Subjt:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP--------------------------------------------

Query:  ------------AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP---------------------
                    AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI MAPFE LYG+CCRSP                     
Subjt:  ------------AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP---------------------

Query:  -------------------------------------------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPD
                                                                           RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPD
Subjt:  -------------------------------------------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPD

Query:  PSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        PSHVVDYEPLEIDENLSY EQPVEVLAREVK LRN++IPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
Subjt:  PSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

A0A5A7U7V9 Reverse transcriptase5.3e-0975.56Show/hide
Query:  MLDFDVILGMDWLAANHASIDCSRKEVAFNPPRWPVLNLREKGQG
        MLDFDVILGMDWLAANHASIDCSRKEV FNPP   + + + KG G
Subjt:  MLDFDVILGMDWLAANHASIDCSRKEVAFNPPRWPVLNLREKGQG

A0A5A7U7V9 Reverse transcriptase1.5e-28580Show/hide
Query:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
        RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
Subjt:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI

Query:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
        QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
Subjt:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI

Query:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK
        IDAQSNDPYLVEKRGL EA QAVEFS+SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQQVK
Subjt:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK

Query:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA-------------------------HFVPAFHPQTDGQTERLNQVLED
        APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKS+                          F  AFHPQTDGQTERLNQVLED
Subjt:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA-------------------------HFVPAFHPQTDGQTERLNQVLED

Query:  MLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP----------------------------------------------------
        MLRACALEFPGSWDSHLHLMEFAYNNSYQATI M PFE LYGKCCRSP                                                    
Subjt:  MLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP----------------------------------------------------

Query:  ------------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVK
                                            RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVK
Subjt:  ------------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVK

Query:  MLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
         LRN+EIPLVKVLWRNHRVEEATWEREDDMRS YP+LFEE
Subjt:  MLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

A0A5A7U943 Pol protein1.7e-28680.82Show/hide
Query:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
        RKGAPFVWSKACEDSFQNLKQKL+TAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
Subjt:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI

Query:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
        QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVT+QLAQLTVQPTLRQRI
Subjt:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI

Query:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK
        IDAQSNDPYLVEKRGLAEAGQAV FSISS+GGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK
Subjt:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK

Query:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP---------------------AFHPQTDGQTERLNQVLEDMLRA
        APRQKPAGLLQPLS+ E KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP                     AFHPQTD QTERLNQVLEDMLRA
Subjt:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP---------------------AFHPQTDGQTERLNQVLEDMLRA

Query:  CALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP--------------------------------------------------------
        CALEFPGSWDSHLHLMEFAYNNSYQATI MAPFE  YGKCCRSP                                                        
Subjt:  CALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP--------------------------------------------------------

Query:  --------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRN
                                        RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVV+YEPLEIDENLSYTEQPVEVLAREVKMLRN
Subjt:  --------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRN

Query:  REIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        REIPLVKVLWRNH+VEEATWEREDDMRSRYPELFEE
Subjt:  REIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

A0A5A7UP94 Pol protein2.8e-28476.6Show/hide
Query:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
        RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI
Subjt:  RKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKI

Query:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
        QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI
Subjt:  QIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRI

Query:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK
        IDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQVK
Subjt:  IDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK

Query:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP--------------------------------------------
        APRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVP                                            
Subjt:  APRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVP--------------------------------------------

Query:  ------------AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP---------------------
                    AFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI MAPFE LY KCCRSP                     
Subjt:  ------------AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSP---------------------

Query:  -------------------------------------------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPD
                                                                           RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPD
Subjt:  -------------------------------------------------------------------RIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPD

Query:  PSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE
        PSHVVDY+PLEIDENLSY EQPVEVLAREVK LRN+EIPLVKVLWRNHR+EEATWEREDDMRSRYPELFEE
Subjt:  PSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNREIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEE

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.6e-5529.03Show/hide
Query:  LRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHY
        L+K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHY
Subjt:  LRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHY

Query:  LYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL
        L    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+
Subjt:  LYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL

Query:  TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAE
        ++    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E
Subjt:  TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAE

Query:  FVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPA-------------------------------
        +V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP                                
Subjt:  FVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPA-------------------------------

Query:  -------------------------FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSPRIGPV
                                 + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE+++     SP + P+
Subjt:  -------------------------FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSPRIGPV

P0CT35 Transposon Tf2-2 polyprotein1.6e-5529.03Show/hide
Query:  LRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHY
        L+K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHY
Subjt:  LRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHY

Query:  LYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL
        L    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+
Subjt:  LYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL

Query:  TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAE
        ++    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E
Subjt:  TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAE

Query:  FVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPA-------------------------------
        +V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP                                
Subjt:  FVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPA-------------------------------

Query:  -------------------------FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSPRIGPV
                                 + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE+++     SP + P+
Subjt:  -------------------------FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSPRIGPV

P0CT36 Transposon Tf2-3 polyprotein1.6e-5529.03Show/hide
Query:  LRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHY
        L+K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHY
Subjt:  LRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHY

Query:  LYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL
        L    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+
Subjt:  LYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL

Query:  TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAE
        ++    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E
Subjt:  TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAE

Query:  FVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPA-------------------------------
        +V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP                                
Subjt:  FVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPA-------------------------------

Query:  -------------------------FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSPRIGPV
                                 + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE+++     SP + P+
Subjt:  -------------------------FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSPRIGPV

P0CT41 Transposon Tf2-12 polyprotein1.6e-5529.03Show/hide
Query:  LRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHY
        L+K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHY
Subjt:  LRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHY

Query:  LYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL
        L    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+
Subjt:  LYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL

Query:  TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAE
        ++    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E
Subjt:  TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAE

Query:  FVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPA-------------------------------
        +V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP                                
Subjt:  FVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPA-------------------------------

Query:  -------------------------FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSPRIGPV
                                 + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE+++     SP + P+
Subjt:  -------------------------FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSPRIGPV

Q9UR07 Transposon Tf2-11 polyprotein1.6e-5529.03Show/hide
Query:  LRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHY
        L+K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHY
Subjt:  LRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHY

Query:  LYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL
        L    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+
Subjt:  LYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQL

Query:  TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAE
        ++    + +++   +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E
Subjt:  TVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAE

Query:  FVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPA-------------------------------
        +V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +  G+  ++VVVDR +K A  VP                                
Subjt:  FVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPA-------------------------------

Query:  -------------------------FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSPRIGPV
                                 + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE+++     SP + P+
Subjt:  -------------------------FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIDMAPFEVLYGKCCRSPRIGPV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGACTTTGATGTAATTCTGGGTATGGATTGGTTGGCCGCTAACCATGCCAGCATAGATTGTTCCCGTAAGGAGGTAGCGTTTAACCCTCCTCGATGGCCAGTTTT
AAATTTAAGGGAGAAGGGTCAAGGTCGTTGCCTCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCG
CACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAAGGTAAGGTAGTCGCTTAT
GCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTGTATGGTGAAAA
GATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGA
TACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAG
CGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTA
TTTGGTTGAGAAGCGGGGCCTAGCAGAGGCAGGGCAGGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCATCAGATAGTG
CGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATG
AAGAGAGAGGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAA
GTGGGAAAATGTGTCCATGGATTTCATTACAGGACTGCCAAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTC
CGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTG
CATTTGATGGAATTTGCTTATAATAATAGTTATCAGGCTACTATTGACATGGCACCATTTGAGGTCTTGTACGGAAAATGTTGTAGATCCCCTCGGATTGGCCCTGTAGC
TTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTCCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCAC
TAGAAATTGATGAAAACTTGAGCTATACAGAACAACCCGTAGAGGTGCTGGCTAGGGAGGTGAAAATGTTGAGGAATAGAGAAATTCCTTTGGTTAAAGTCTTATGGCGG
AATCACCGCGTTGAAGAGGCCACATGGGAGCGAGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGACTTTGATGTAATTCTGGGTATGGATTGGTTGGCCGCTAACCATGCCAGCATAGATTGTTCCCGTAAGGAGGTAGCGTTTAACCCTCCTCGATGGCCAGTTTT
AAATTTAAGGGAGAAGGGTCAAGGTCGTTGCCTCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCG
CACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAAGGTAAGGTAGTCGCTTAT
GCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTGTATGGTGAAAA
GATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGA
TACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAG
CGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTA
TTTGGTTGAGAAGCGGGGCCTAGCAGAGGCAGGGCAGGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCATCAGATAGTG
CGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATG
AAGAGAGAGGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAA
GTGGGAAAATGTGTCCATGGATTTCATTACAGGACTGCCAAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTC
CGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTG
CATTTGATGGAATTTGCTTATAATAATAGTTATCAGGCTACTATTGACATGGCACCATTTGAGGTCTTGTACGGAAAATGTTGTAGATCCCCTCGGATTGGCCCTGTAGC
TTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTCCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCAC
TAGAAATTGATGAAAACTTGAGCTATACAGAACAACCCGTAGAGGTGCTGGCTAGGGAGGTGAAAATGTTGAGGAATAGAGAAATTCCTTTGGTTAAAGTCTTATGGCGG
AATCACCGCGTTGAAGAGGCCACATGGGAGCGAGAAGATGACATGAGGTCCCGTTATCCCGAACTGTTCGAGGAATAA
Protein sequenceShow/hide protein sequence
MLDFDVILGMDWLAANHASIDCSRKEVAFNPPRWPVLNLREKGQGRCLRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAY
ASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLE
RAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNM
KREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHL
HLMEFAYNNSYQATIDMAPFEVLYGKCCRSPRIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNREIPLVKVLWR
NHRVEEATWEREDDMRSRYPELFEE